ATP-dependent RNA helicase SUPV3L1
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0322251 |
| rosa_multiflora | Rmu_sc0001942.1_g000026 |
| rosa_samantha | Rh1AG050300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 321 |
| AcuI | CTGAAG | 1 cut(s) | 239 |
| AdeI | CACNNNGTG | 1 cut(s) | 275 |
| AfaI | GTAC | 1 cut(s) | 128 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 343 |
| AgsI | TTSAA | 3 cut(s) | 293, 302, 468 |
| AjnI | CCWGG | 3 cut(s) | 174, 244, 271 |
| AluBI | AGCT | 3 cut(s) | 289, 367, 464 |
| AluI | AGCT | 3 cut(s) | 289, 367, 464 |
| Alw21I | GWGCWC | 1 cut(s) | 280 |
| Alw44I | GTGCAC | 1 cut(s) | 276 |
| AlwI | GGATC | 1 cut(s) | 321 |
| AoxI | GGCC | 2 cut(s) | 443, 450 |
| ApaLI | GTGCAC | 1 cut(s) | 276 |
| ApeKI | GCWGC | 1 cut(s) | 86 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 297, 411 |
| AspS9I | GGNCC | 1 cut(s) | 444 |
| BaeGI | GKGCMC | 1 cut(s) | 280 |
| Bbv12I | GWGCWC | 1 cut(s) | 280 |
| BbvI | GCAGC | 1 cut(s) | 73 |
| BccI | CCATC | 1 cut(s) | 395 |
| BciT130I | CCWGG | 3 cut(s) | 176, 246, 273 |
| BfaI | CTAG | 1 cut(s) | 416 |
| BisI | GCNGC | 1 cut(s) | 87 |
| BlsI | GCNGC | 1 cut(s) | 88 |
| Bme1390I | CCNGG | 3 cut(s) | 176, 246, 273 |
| BmgT120I | GGNCC | 1 cut(s) | 444 |
| BmrFI | CCNGG | 3 cut(s) | 176, 246, 273 |
| BmrI | ACTGGG | 1 cut(s) | 140 |
| BmsI | GCATC | 1 cut(s) | 380 |
| BmuI | ACTGGG | 1 cut(s) | 140 |
| BpuEI | CTTGAG | 1 cut(s) | 175 |
| BsaJI | CCNNGG | 4 cut(s) | 174, 175, 245, 447 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 343 |
| Bse1I | ACTGG | 1 cut(s) | 146 |
| Bse3DI | GCAATG | 1 cut(s) | 54 |
| BseBI | CCWGG | 3 cut(s) | 176, 246, 273 |
| BseDI | CCNNGG | 4 cut(s) | 174, 175, 245, 447 |
| BseGI | GGATG | 1 cut(s) | 170 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 343 |
| BseMI | GCAATG | 1 cut(s) | 54 |
| BseNI | ACTGG | 1 cut(s) | 146 |
| BseRI | GAGGAG | 1 cut(s) | 359 |
| BseSI | GKGCMC | 1 cut(s) | 280 |
| BseXI | GCAGC | 1 cut(s) | 73 |
| BshFI | GGCC | 2 cut(s) | 445, 452 |
| BsiHKAI | GWGCWC | 1 cut(s) | 280 |
| BslFI | GGGAC | 3 cut(s) | 227, 262, 478 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 343 |
| BsmFI | GGGAC | 3 cut(s) | 227, 262, 478 |
| BsmI | GAATGC | 1 cut(s) | 34 |
| BsnI | GGCC | 2 cut(s) | 445, 452 |
| Bsp1286I | GDGCHC | 1 cut(s) | 280 |
| Bsp143I | GATC | 2 cut(s) | 313, 402 |
| BspANI | GGCC | 2 cut(s) | 445, 452 |
| BspPI | GGATC | 1 cut(s) | 321 |
| BspQI | GCTCTTC | 1 cut(s) | 6 |
| BsrDI | GCAATG | 1 cut(s) | 54 |
| BsrI | ACTGG | 1 cut(s) | 146 |
| BssECI | CCNNGG | 4 cut(s) | 174, 175, 245, 447 |
| BssMI | GATC | 2 cut(s) | 313, 402 |
| BssT1I | CCWWGG | 1 cut(s) | 447 |
| Bst2UI | CCWGG | 3 cut(s) | 176, 246, 273 |
| Bst4CI | ACNGT | 2 cut(s) | 189, 362 |
| Bst6I | CTCTTC | 2 cut(s) | 6, 402 |
| BstC8I | GCNNGC | 1 cut(s) | 369 |
| BstF5I | GGATG | 1 cut(s) | 170 |
| BstKTI | GATC | 2 cut(s) | 316, 405 |
| BstMBI | GATC | 2 cut(s) | 313, 402 |
| BstNI | CCWGG | 3 cut(s) | 176, 246, 273 |
| BstSCI | CCNGG | 3 cut(s) | 174, 244, 271 |
| BstSLI | GKGCMC | 1 cut(s) | 280 |
| BstV1I | GCAGC | 1 cut(s) | 73 |
| BstX2I | RGATCY | 1 cut(s) | 313 |
| BstYI | RGATCY | 1 cut(s) | 313 |
| BsuRI | GGCC | 2 cut(s) | 445, 452 |
| BtsCI | GGATG | 1 cut(s) | 170 |
| Cac8I | GCNNGC | 1 cut(s) | 369 |
| Cfr13I | GGNCC | 1 cut(s) | 444 |
| CsiI | ACCWGGT | 1 cut(s) | 271 |
| Csp6I | GTAC | 1 cut(s) | 127 |
| CviAII | CATG | 1 cut(s) | 119 |
| CviJI | RGCY | 7 cut(s) | 144, 289, 367, 445, 452, 464, 509 |
| CviKI_1 | RGCY | 7 cut(s) | 144, 289, 367, 445, 452, 464, 509 |
| CviQI | GTAC | 1 cut(s) | 127 |
| DpnI | GATC | 2 cut(s) | 315, 404 |
| DpnII | GATC | 2 cut(s) | 313, 402 |
| DraIII | CACNNNGTG | 1 cut(s) | 275 |
| Eam1104I | CTCTTC | 2 cut(s) | 6, 402 |
| EarI | CTCTTC | 2 cut(s) | 6, 402 |
| Eco130I | CCWWGG | 1 cut(s) | 447 |
| Eco57I | CTGAAG | 1 cut(s) | 239 |
| EcoRII | CCWGG | 3 cut(s) | 174, 244, 271 |
| EcoT14I | CCWWGG | 1 cut(s) | 447 |
| ErhI | CCWWGG | 1 cut(s) | 447 |
| FaeI | CATG | 1 cut(s) | 122 |
| FaiI | YATR | 5 cut(s) | 120, 140, 204, 321, 506 |
| FaqI | GGGAC | 3 cut(s) | 227, 262, 478 |
| FatI | CATG | 1 cut(s) | 118 |
| Fnu4HI | GCNGC | 1 cut(s) | 87 |
| FokI | GGATG | 1 cut(s) | 157 |
| Fsp4HI | GCNGC | 1 cut(s) | 87 |
| FspBI | CTAG | 1 cut(s) | 416 |
| GluI | GCNGC | 1 cut(s) | 87 |
| HaeIII | GGCC | 2 cut(s) | 445, 452 |
| Hin1II | CATG | 1 cut(s) | 122 |
| HincII | GTYRAC | 1 cut(s) | 151 |
| HindII | GTYRAC | 1 cut(s) | 151 |
| HinfI | GANTC | 2 cut(s) | 293, 347 |
| Hpy166II | GTNNAC | 2 cut(s) | 151, 278 |
| Hpy188I | TCNGA | 4 cut(s) | 43, 93, 258, 338 |
| Hpy188III | TCNNGA | 2 cut(s) | 230, 416 |
| Hpy8I | GTNNAC | 2 cut(s) | 151, 278 |
| HpyCH4III | ACNGT | 2 cut(s) | 189, 362 |
| HpyCH4V | TGCA | 6 cut(s) | 32, 118, 206, 278, 371, 433 |
| Hsp92II | CATG | 1 cut(s) | 122 |
| Kzo9I | GATC | 2 cut(s) | 313, 402 |
| LguI | GCTCTTC | 1 cut(s) | 6 |
| LpnPI | CCDG | 9 cut(s) | 159, 161, 188, 231, 258, 258, 285, 369, 410 |
| Lsp1109I | GCAGC | 1 cut(s) | 73 |
| LweI | GCATC | 1 cut(s) | 380 |
| MabI | ACCWGGT | 1 cut(s) | 271 |
| MaeI | CTAG | 1 cut(s) | 416 |
| MalI | GATC | 2 cut(s) | 315, 404 |
| MboI | GATC | 2 cut(s) | 313, 402 |
| MboII | GAAGA | 4 cut(s) | 23, 80, 366, 419 |
| MflI | RGATCY | 1 cut(s) | 313 |
| MhlI | GDGCHC | 1 cut(s) | 280 |
| MluCI | AATT | 2 cut(s) | 46, 199 |
| MlyI | GAGTC | 1 cut(s) | 356 |
| MnlI | CCTC | 3 cut(s) | 117, 337, 435 |
| MroXI | GAANNNNTTC | 2 cut(s) | 297, 411 |
| MseI | TTAA | 1 cut(s) | 479 |
| MspR9I | CCNGG | 3 cut(s) | 176, 246, 273 |
| Mva1269I | GAATGC | 1 cut(s) | 34 |
| MvaI | CCWGG | 3 cut(s) | 176, 246, 273 |
| NdeII | GATC | 2 cut(s) | 313, 402 |
| NlaIII | CATG | 1 cut(s) | 122 |
| PasI | CCCWGGG | 1 cut(s) | 175 |
| PciSI | GCTCTTC | 1 cut(s) | 6 |
| PctI | GAATGC | 1 cut(s) | 34 |
| PdmI | GAANNNNTTC | 2 cut(s) | 297, 411 |
| PfeI | GAWTC | 1 cut(s) | 293 |
| PkrI | GCNGC | 1 cut(s) | 88 |
| PleI | GAGTC | 1 cut(s) | 355 |
| PpsI | GAGTC | 1 cut(s) | 355 |
| Psp6I | CCWGG | 3 cut(s) | 174, 244, 271 |
| PspGI | CCWGG | 3 cut(s) | 174, 244, 271 |
| PspPI | GGNCC | 1 cut(s) | 444 |
| PsrI | GAACNNNNNNTAC | 1 cut(s) | 494 |
| PsuI | RGATCY | 1 cut(s) | 313 |
| RsaI | GTAC | 1 cut(s) | 128 |
| RsaNI | GTAC | 1 cut(s) | 127 |
| SapI | GCTCTTC | 1 cut(s) | 6 |
| SaqAI | TTAA | 1 cut(s) | 479 |
| SatI | GCNGC | 1 cut(s) | 87 |
| Sau3AI | GATC | 2 cut(s) | 313, 402 |
| Sau96I | GGNCC | 1 cut(s) | 444 |
| SchI | GAGTC | 1 cut(s) | 356 |
| ScrFI | CCNGG | 3 cut(s) | 176, 246, 273 |
| SduI | GDGCHC | 1 cut(s) | 280 |
| SetI | ASST | 8 cut(s) | 132, 277, 291, 309, 369, 399, 466, 479 |
| SexAI | ACCWGGT | 1 cut(s) | 271 |
| SfaNI | GCATC | 1 cut(s) | 380 |
| SmlI | CTYRAG | 1 cut(s) | 154 |
| SmoI | CTYRAG | 1 cut(s) | 154 |
| Sse9I | AATT | 2 cut(s) | 46, 199 |
| SspI | AATATT | 1 cut(s) | 237 |
| SspMI | CTAG | 1 cut(s) | 416 |
| StyD4I | CCNGG | 3 cut(s) | 174, 244, 271 |
| StyI | CCWWGG | 1 cut(s) | 447 |
| TaaI | ACNGT | 2 cut(s) | 189, 362 |
| TaqI | TCGA | 2 cut(s) | 229, 405 |
| TasI | AATT | 2 cut(s) | 46, 199 |
| TfiI | GAWTC | 1 cut(s) | 293 |
| Tru1I | TTAA | 1 cut(s) | 479 |
| Tru9I | TTAA | 1 cut(s) | 479 |
| TseI | GCWGC | 1 cut(s) | 86 |
| TspDTI | ATGAA | 3 cut(s) | 43, 92, 159 |
| VneI | GTGCAC | 1 cut(s) | 276 |
| XbaI | TCTAGA | 1 cut(s) | 415 |
| XmnI | GAANNNNTTC | 2 cut(s) | 297, 411 |
| XspI | CTAG | 1 cut(s) | 416 |