RchiOBHm_Chr1g0376591

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0013456
Physical Location & Seq
Reverse (-)
63793393 .. 63798493
5101 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2151 bp
ATGACCTCCGTCACGCTCTCTCTTCCCCCCACTGCCGCCCCCACGCGCCTCCGCACAATCAAGCCTCGACTCGCTTCCCTCTACCAACCTCTCCGCGAATCCTATTCCTTCCCGCGCCTCTCACTCCACCGCCTCCCTAACCTCACCGCCGCCTCCGCCTACGTGTCCGGACCCGGCTCCGACCCGATTGTGACCGAGCCCGACCCGAAATTCGACGAGCCGGAGTCAAAGGTCCAGCCGCCGAGTGTGATTGGCTGGGGGCTGCTCTGGAGCCTTCTGCTCAAGCACAAGCTCCGACTGGCAATTTCCGCTTTTGCCCTCGTCGGCTGCAGCGCTTGCACTCTTTCAATGCCGATATTTTCAGGACGGTTTTTCGAAGTTCTGATAGGGAAGAGAACAGAGCCATTGTGGAAATTGCTGAGTAAAGTCGGAGTTTTGTATGCTTTGGAGCCGATTTTAACCGTTGTTTTCGTTGTTAATATGAACACTGTATGGGAAAAGGTCATGTCCGCGCTTCGAGCTCAGATTTTCGGCAGGGTTTTGATTCAGAAGGTCGAGTTTTTTGACCGTTACAAGGTTGGTGAATTGACGGGATTGTTAACGTCTGATTTGGGTTCTCTTAAAAATGTTGTGAGCGAAAACATTTCAAGGGACCGCGGATTCAGGGCACTTACTGAGGCAAGCAACTCTACACCAAGCACAAAGGGGGCTTTATGTTACTGGAACATTGTGCATACTCTTTGTTTTGGCTCCCCAACTTGCACCAATCCTTGGCCTTCTGATGCTCACCGTGTCTGTTTTACTTTGTACAAGAGATCAACTGTGCCTGTTTTCAAGGCGCATGGAATGGCTCAAGCATTCATATCTGATTGTGTGACGGAAACTTTTTCTGCCATACGTACTGTAAGATCCTTTGGTGGGGAAAAGCGCCAAATGCTAATGTTTGGTAAACAGGTGCTTGCTTACCAGAGCAGTGGCATAAAGCTTGGGGTCTTCAAATCCATTAACGAATCGTTGACTAGAGTTGTTGTGTATATATCTCTATTGGCCTTATATTCTCTTGGAGGAAGCAAAGTGAAGGCGGGTGAACTCTCTGTTGGAACTGTGGCTTCTTTCATTGGTTATACTTTCACATTAACATTCGCCGTTCAAGGCCTGGTTAACACATTTGGAGATCTTCGTGGAACTTTTGCTGCAGTGGAGAGGATTAACTCTGTTTTATCTGGGGTAGAAATTGATGAAGCCCTTGCTTATGGCTTAGAAAGGGAAATGCAACAAAAGAAAGTACTTGATGAAGATTACAGATTGTTTCTCATTGATGGTTCCAATGAGAAAAACCAGTCAGTAAATACGCATTACATGTCAGCTCTGAAATCAGCCAGCAATGTTGGACGCTTAGCTTGGTCTGGCAATGTTTGTCTCGAAGATGTGCATTTCTCTTATCCTTTGAGACCTGATGTAGAAATTCTGAATGGTCTAAATCTAACGCTAAAGTGTGGAACTGTAACTGCTCTGGTTGGTTCAAGCGGTGCTGGAAAAAGTACTGTTGTACAGCTATTGGCACGTTTCTATGAGCCAACTTCAGGTCGTATAACAGTTGGAGGAGAGGATGTTAGAACATTTGACAAGAGTGAATGGGCACGAGTCGTCTCTCTAGTGAACCAAGAACCTGTTCTTTTTTCGGTATCAGTTGGAGAAAATATTGCATATGGGCTTCCAGATGATCATGTATCCAAAGATGACATAATAAAGGCTGCAAAAGCTGCAAATGCTCATGAATTCATAATTTCACTTCCACAGGGTTATGACACACTGGTTGGTGAACGTGGAGGTCTACTTAGTGGAGGCCAGAGACAGAGAATCGCAATTGCAAGAGCTCTGCTTAAGAATTCCCCAATCCTTATACTTGATGAGGCCACCAGTGCATTGGATGCAGTTAGTGAGCGCCTAGTCCAGGATGCATTGAATCATCTGATGAAACAGCGGACAACGTTGGTGATTGCTCACCGGTTAAGCACGGTTCAAAATGCCCATCAAATTGCATTGTGTTCCGAGGGGAAGATAGCTGAACTAGGGACGCACTCCGAACTATTGGCCAAGAAAGGTCAATATGCTTCATTGGTTGGCACTCAGAGACTTGCATTCGAGTGA

Protein Analysis

716

Amino Acids

78.17

Weight (kDa)

9.06

Isoelectric Point (pI)

30.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 101 - 215 3.1e-13 ABC transporter transmembrane region
ABC_membrane PF00664 284 - 382 2.3e-14 ABC transporter transmembrane region
ABC_tran PF00005 490 - 641 6.9e-33 ABC transporter
SMC_N PF02463 594 - 680 1.4e-06 RecF/RecN/SMC N terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013456)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25450 AT4G25450
fragaria_vesca FvH4_7g28920
malus_domestica MD07G1262600.v1.1
prunus_persica Prupe.2G289200_v2.0.a1 Prupe.2G289200_v2.0.a1
pyrus_communis pycom07g24170
rosa_chinensis RchiOBHm_Chr1g0376591
rosa_laevigata RLG00000026595
rosa_multiflora Rmu_sc0001308.1_g000002 Rmu_sc0005594.1_g000009
rosa_roxburghii Rroxscaffold_4G00281960
rosa_rugosa Rorug01G0396600
rosa_samantha Rh1AG413200 Rh1BG372900 Rh1CG386800 Rh1DG403800
rosa_wichuraiana Rw1G036230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 771
AccI GTMKAC 1 cut(s) 1834
AccII CGCG 5 cut(s) 46, 96, 115, 512, 657
AccIII TCCGGA 1 cut(s) 167
AclI AACGTT 1 cut(s) 1991
AclWI GGATC 1 cut(s) 903
AcoI YGGCCR 1 cut(s) 2094
AcsI RAATTY 4 cut(s) 209, 1464, 1778, 1888
AcuI CTGAAG 1 cut(s) 1566
AfaI GTAC 5 cut(s) 809, 901, 1287, 1543, 1551
AfeI AGCGCT 1 cut(s) 334
AfiI CCNNNNNNNGG 5 cut(s) 574, 771, 918, 1583, 1954
AflII CTTAAG 1 cut(s) 1883
AflIII ACRYGT 2 cut(s) 162, 1359
AgeI ACCGGT 1 cut(s) 2007
AgsI TTSAA 8 cut(s) 348, 648, 835, 997, 1151, 1524, 1966, 2024
AjnI CCWGG 2 cut(s) 1155, 1953
AjuI GAANNNNNNNTTGG 4 cut(s) 1080, 1112, 1656, 1688
AluBI AGCT 9 cut(s) 292, 521, 985, 1367, 1400, 1555, 1763, 1877, 2066
AluI AGCT 9 cut(s) 292, 521, 985, 1367, 1400, 1555, 1763, 1877, 2066
Alw21I GWGCWC 2 cut(s) 523, 1879
Alw26I GTCTC 5 cut(s) 1424, 1444, 1654, 1846, 2128
AlwI GGATC 1 cut(s) 903
Aor13HI TCCGGA 1 cut(s) 167
Aor51HI AGCGCT 1 cut(s) 334
AoxI GGCC 6 cut(s) 773, 1047, 1153, 1846, 1914, 2094
ApeKI GCWGC 6 cut(s) 262, 327, 330, 1193, 1754, 1763
ApoI RAATTY 4 cut(s) 209, 1464, 1778, 1888
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
AsiGI ACCGGT 1 cut(s) 2007
Asp700I GAANNNNTTC 1 cut(s) 1671
AspLEI GCGC 7 cut(s) 48, 117, 335, 514, 841, 930, 1947
AspS9I GGNCC 3 cut(s) 170, 232, 652
AsuC2I CCSGG 1 cut(s) 174
AsuHPI GGTGA 7 cut(s) 136, 593, 779, 1097, 1832, 1997, 2008
AsuII TTCGAA 1 cut(s) 375
AvaII GGWCC 3 cut(s) 170, 232, 652
BaeGI GKGCMC 2 cut(s) 670, 1642
BalI TGGCCA 1 cut(s) 2096
BanII GRGCYC 3 cut(s) 201, 523, 1879
BauI CACGAG 1 cut(s) 1641
BbsI GAAGAC 1 cut(s) 985
Bbv12I GWGCWC 2 cut(s) 523, 1879
BbvI GCAGC 6 cut(s) 249, 314, 342, 1180, 1741, 1750
BccI CCATC 2 cut(s) 1313, 2040
BceAI ACGGC 1 cut(s) 1130
BciT130I CCWGG 2 cut(s) 1157, 1955
BciVI GTATCC 1 cut(s) 1741
BclI TGATCA 1 cut(s) 1723
BcnI CCSGG 1 cut(s) 174
BcoDI GTCTC 5 cut(s) 1424, 1444, 1654, 1846, 2128
BfaI CTAG 4 cut(s) 1020, 1655, 1949, 2072
BfmI CTRYAG 2 cut(s) 328, 1194
BfoI RGCGCY 3 cut(s) 336, 931, 1948
BfrI CTTAAG 1 cut(s) 1883
BfuI GTATCC 1 cut(s) 1741
BglII AGATCT 1 cut(s) 1174
BisI GCNGC 9 cut(s) 36, 150, 239, 263, 328, 331, 1194, 1755, 1764
BlpI GCTNAGC 1 cut(s) 1396
BlsI GCNGC 9 cut(s) 37, 151, 240, 264, 329, 332, 1195, 1756, 1765
BmcAI AGTACT 2 cut(s) 1287, 1543
Bme1390I CCNGG 3 cut(s) 174, 1157, 1955
Bme18I GGWCC 3 cut(s) 170, 232, 652
BmgT120I GGNCC 3 cut(s) 170, 232, 652
BmiI GGNNCC 7 cut(s) 172, 178, 272, 450, 653, 751, 1324
BmrFI CCNGG 3 cut(s) 174, 1157, 1955
BmsI GCATC 3 cut(s) 772, 1921, 1948
BoxI GACNNNNGTC 1 cut(s) 8
BpiI GAAGAC 1 cut(s) 985
BpmI CTGGAG 1 cut(s) 289
Bpu1102I GCTNAGC 1 cut(s) 1396
Bpu14I TTCGAA 1 cut(s) 375
BpuEI CTTGAG 2 cut(s) 266, 837
BpuMI CCSGG 1 cut(s) 174
BsaAI YACGTR 2 cut(s) 163, 899
BsaI GGTCTC 1 cut(s) 1444
BsaJI CCNNGG 3 cut(s) 655, 770, 2052
BsaWI WCCGGW 2 cut(s) 167, 2007
BsaXI ACNNNNNCTCC 2 cut(s) 1596, 1626
Bsc4I CCNNNNNNNGG 5 cut(s) 574, 771, 918, 1583, 1954
Bse118I RCCGGY 1 cut(s) 2007
Bse1I ACTGG 5 cut(s) 303, 725, 1339, 1818, 1920
Bse3DI GCAATG 2 cut(s) 1390, 1417
BseAI TCCGGA 1 cut(s) 167
BseBI CCWGG 2 cut(s) 1157, 1955
BseDI CCNNGG 3 cut(s) 655, 770, 2052
BseGI GGATG 3 cut(s) 1615, 1936, 1963
BseLI CCNNNNNNNGG 5 cut(s) 574, 771, 918, 1583, 1954
BseMI GCAATG 2 cut(s) 1390, 1417
BseMII CTCAG 4 cut(s) 410, 536, 666, 2144
BseNI ACTGG 5 cut(s) 303, 725, 1339, 1818, 1920
BseRI GAGGAG 1 cut(s) 1617
BseSI GKGCMC 2 cut(s) 670, 1642
BseXI GCAGC 6 cut(s) 249, 314, 342, 1180, 1741, 1750
BseYI CCCAGC 1 cut(s) 255
Bsh1236I CGCG 5 cut(s) 46, 96, 115, 512, 657
BshFI GGCC 6 cut(s) 775, 1049, 1155, 1848, 1916, 2096
BshTI ACCGGT 1 cut(s) 2007
BsiHKAI GWGCWC 2 cut(s) 523, 1879
BsiSI CCGG 4 cut(s) 168, 174, 221, 2008
BslFI GGGAC 2 cut(s) 665, 2089
BslI CCNNNNNNNGG 5 cut(s) 574, 771, 918, 1583, 1954
BsmAI GTCTC 5 cut(s) 1424, 1444, 1654, 1846, 2128
BsmBI CGTCTC 1 cut(s) 1654
BsmFI GGGAC 2 cut(s) 665, 2089
BsmI GAATGC 2 cut(s) 857, 2141
BsnI GGCC 6 cut(s) 775, 1049, 1155, 1848, 1916, 2096
Bso31I GGTCTC 1 cut(s) 1444
Bsp119I TTCGAA 1 cut(s) 375
Bsp1286I GDGCHC 5 cut(s) 201, 523, 670, 1642, 1879
Bsp13I TCCGGA 1 cut(s) 167
Bsp1407I TGTACA 2 cut(s) 807, 1549
Bsp143I GATC 4 cut(s) 815, 908, 1174, 1723
Bsp1720I GCTNAGC 1 cut(s) 1396
BspANI GGCC 6 cut(s) 775, 1049, 1155, 1848, 1916, 2096
BspCNI CTCAG 4 cut(s) 411, 535, 667, 2143
BspEI TCCGGA 1 cut(s) 167
BspFNI CGCG 5 cut(s) 46, 96, 115, 512, 657
BspHI TCATGA 1 cut(s) 1774
BspLI GGNNCC 7 cut(s) 172, 178, 272, 450, 653, 751, 1324
BspMAI CTGCAG 2 cut(s) 332, 1198
BspPI GGATC 1 cut(s) 903
BspT104I TTCGAA 1 cut(s) 375
BspTI CTTAAG 1 cut(s) 1883
BspTNI GGTCTC 1 cut(s) 1444
BsrDI GCAATG 2 cut(s) 1390, 1417
BsrFI RCCGGY 1 cut(s) 2007
BsrGI TGTACA 2 cut(s) 807, 1549
BsrI ACTGG 5 cut(s) 303, 725, 1339, 1818, 1920
BssAI RCCGGY 1 cut(s) 2007
BssECI CCNNGG 3 cut(s) 655, 770, 2052
BssMI GATC 4 cut(s) 815, 908, 1174, 1723
BssSI CACGAG 1 cut(s) 1641
BssT1I CCWWGG 1 cut(s) 770
Bst2BI CACGAG 1 cut(s) 1641
Bst2UI CCWGG 2 cut(s) 1157, 1955
Bst6I CTCTTC 2 cut(s) 27, 386
BstAFI CTTAAG 1 cut(s) 1883
BstAPI GCANNNNNTGC 3 cut(s) 336, 1763, 1931
BstAUI TGTACA 2 cut(s) 807, 1549
BstBAI YACGTR 2 cut(s) 163, 899
BstBI TTCGAA 1 cut(s) 375
BstC8I GCNNGC 4 cut(s) 337, 682, 960, 1381
BstDEI CTNAG 7 cut(s) 419, 522, 675, 1258, 1396, 1838, 2130
BstDSI CCRYGG 1 cut(s) 655
BstENI CCTNNNNNAGG 1 cut(s) 1952
BstF5I GGATG 3 cut(s) 1615, 1936, 1963
BstFNI CGCG 5 cut(s) 46, 96, 115, 512, 657
BstH2I RGCGCY 3 cut(s) 336, 931, 1948
BstHHI GCGC 7 cut(s) 48, 117, 335, 514, 841, 930, 1947
BstKTI GATC 4 cut(s) 818, 911, 1177, 1726
BstMAI GTCTC 5 cut(s) 1424, 1444, 1654, 1846, 2128
BstMBI GATC 4 cut(s) 815, 908, 1174, 1723
BstNI CCWGG 2 cut(s) 1157, 1955
BstNSI RCATGY 1 cut(s) 1363
BstPAI GACNNNNGTC 1 cut(s) 8
BstSCI CCNGG 3 cut(s) 172, 1155, 1953
BstSFI CTRYAG 2 cut(s) 328, 1194
BstSLI GKGCMC 2 cut(s) 670, 1642
BstSNI TACGTA 1 cut(s) 899
BstUI CGCG 5 cut(s) 46, 96, 115, 512, 657
BstV1I GCAGC 6 cut(s) 249, 314, 342, 1180, 1741, 1750
BstV2I GAAGAC 1 cut(s) 985
BstX2I RGATCY 2 cut(s) 908, 1174
BstXI CCANNNNNNTGG 2 cut(s) 974, 1927
BstYI RGATCY 2 cut(s) 908, 1174
BsuI GTATCC 1 cut(s) 1741
BsuRI GGCC 6 cut(s) 775, 1049, 1155, 1848, 1916, 2096
BtgI CCRYGG 1 cut(s) 655
BtsCI GGATG 3 cut(s) 1615, 1936, 1963
BtsI GCAGTG 3 cut(s) 30, 979, 1203
BtsIMutI CAGTG 6 cut(s) 30, 486, 979, 1203, 1811, 1927
Cac8I GCNNGC 4 cut(s) 337, 682, 960, 1381
CciI TCATGA 1 cut(s) 1774
CfoI GCGC 7 cut(s) 48, 117, 335, 514, 841, 930, 1947
Cfr10I RCCGGY 1 cut(s) 2007
Cfr13I GGNCC 3 cut(s) 170, 232, 652
Cfr42I CCGCGG 1 cut(s) 658
CseI GACGC 2 cut(s) 1401, 2086
Csp6I GTAC 5 cut(s) 808, 900, 1286, 1542, 1550
CspAI ACCGGT 1 cut(s) 2007
CviAII CATG 5 cut(s) 505, 842, 1360, 1727, 1775
CviQI GTAC 5 cut(s) 808, 900, 1286, 1542, 1550
DdeI CTNAG 7 cut(s) 419, 522, 675, 1258, 1396, 1838, 2130
DpnI GATC 4 cut(s) 817, 910, 1176, 1725
DpnII GATC 4 cut(s) 815, 908, 1174, 1723
EaeI YGGCCR 1 cut(s) 2094
Eam1104I CTCTTC 2 cut(s) 27, 386
EarI CTCTTC 2 cut(s) 27, 386
EciI GGCGGA 1 cut(s) 145
Ecl136II GAGCTC 2 cut(s) 521, 1877
Eco105I TACGTA 1 cut(s) 899
Eco130I CCWWGG 1 cut(s) 770
Eco147I AGGCCT 1 cut(s) 1155
Eco24I GRGCYC 3 cut(s) 201, 523, 1879
Eco31I GGTCTC 1 cut(s) 1444
Eco47I GGWCC 3 cut(s) 170, 232, 652
Eco47III AGCGCT 1 cut(s) 334
Eco53kI GAGCTC 2 cut(s) 521, 1877
Eco57I CTGAAG 1 cut(s) 1566
EcoICRI GAGCTC 2 cut(s) 521, 1877
EcoNI CCTNNNNNAGG 1 cut(s) 1952
EcoRI GAATTC 2 cut(s) 1778, 1888
EcoRII CCWGG 2 cut(s) 1155, 1953
EcoT14I CCWWGG 1 cut(s) 770
EcoT22I ATGCAT 1 cut(s) 1963
EcoT38I GRGCYC 3 cut(s) 201, 523, 1879
ErhI CCWWGG 1 cut(s) 770
Esp3I CGTCTC 1 cut(s) 1654
FaeI CATG 5 cut(s) 508, 845, 1363, 1730, 1778
FaqI GGGAC 2 cut(s) 665, 2089
FatI CATG 5 cut(s) 504, 841, 1359, 1726, 1774
FauI CCCGC 2 cut(s) 120, 1075
FauNDI CATATG 1 cut(s) 1708
FbaI TGATCA 1 cut(s) 1723
FblI GTMKAC 1 cut(s) 1834
Fnu4HI GCNGC 9 cut(s) 36, 150, 239, 263, 328, 331, 1194, 1755, 1764
FokI GGATG 3 cut(s) 1622, 1943, 1970
FriOI GRGCYC 3 cut(s) 201, 523, 1879
Fsp4HI GCNGC 9 cut(s) 36, 150, 239, 263, 328, 331, 1194, 1755, 1764
FspBI CTAG 4 cut(s) 1020, 1655, 1949, 2072
GlaI GCGC 7 cut(s) 47, 116, 334, 513, 840, 929, 1946
GluI GCNGC 9 cut(s) 36, 150, 239, 263, 328, 331, 1194, 1755, 1764
GsaI CCCAGC 1 cut(s) 259
GsuI CTGGAG 1 cut(s) 289
HaeII RGCGCY 3 cut(s) 336, 931, 1948
HaeIII GGCC 6 cut(s) 775, 1049, 1155, 1848, 1916, 2096
HapII CCGG 4 cut(s) 168, 174, 221, 2008
HgaI GACGC 2 cut(s) 1401, 2086
HhaI GCGC 7 cut(s) 48, 117, 335, 514, 841, 930, 1947
Hin1II CATG 5 cut(s) 508, 845, 1363, 1730, 1778
Hin6I GCGC 7 cut(s) 46, 115, 333, 512, 839, 928, 1945
HinP1I GCGC 7 cut(s) 46, 115, 333, 512, 839, 928, 1945
HincII GTYRAC 3 cut(s) 600, 1017, 1162
HindII GTYRAC 3 cut(s) 600, 1017, 1162
HindIII AAGCTT 1 cut(s) 983
HinfI GANTC 9 cut(s) 69, 98, 224, 544, 660, 1010, 1644, 1860, 1966
HpaI GTTAAC 2 cut(s) 600, 1162
HpaII CCGG 4 cut(s) 168, 174, 221, 2008
HphI GGTGA 7 cut(s) 136, 593, 779, 1097, 1832, 1997, 2008
Hpy166II GTNNAC 8 cut(s) 600, 950, 1017, 1088, 1162, 1660, 1823, 1835
Hpy188III TCNNGA 6 cut(s) 168, 268, 363, 1421, 1718, 1775
Hpy8I GTNNAC 8 cut(s) 600, 950, 1017, 1088, 1162, 1660, 1823, 1835
Hpy99I CGWCG 2 cut(s) 218, 326
HpyAV CCTTC 5 cut(s) 118, 284, 544, 786, 1072
HpyCH4IV ACGT 6 cut(s) 162, 602, 898, 1564, 1825, 1991
HpyF3I CTNAG 7 cut(s) 419, 522, 675, 1258, 1396, 1838, 2130
HpySE526I ACGT 6 cut(s) 162, 602, 898, 1564, 1825, 1991
Hsp92II CATG 5 cut(s) 508, 845, 1363, 1730, 1778
HspAI GCGC 7 cut(s) 46, 115, 333, 512, 839, 928, 1945
Kpn2I TCCGGA 1 cut(s) 167
Ksp22I TGATCA 1 cut(s) 1723
KspAI GTTAAC 2 cut(s) 600, 1162
KspI CCGCGG 1 cut(s) 658
Kzo9I GATC 4 cut(s) 815, 908, 1174, 1723
LmnI GCTCC 5 cut(s) 182, 270, 297, 448, 755
Lsp1109I GCAGC 6 cut(s) 249, 314, 342, 1180, 1741, 1750
LweI GCATC 3 cut(s) 772, 1921, 1948
MaeI CTAG 4 cut(s) 1020, 1655, 1949, 2072
MaeII ACGT 6 cut(s) 162, 602, 898, 1564, 1825, 1991
MaeIII GTNAC 6 cut(s) 10, 190, 569, 716, 874, 1504
MalI GATC 4 cut(s) 817, 910, 1176, 1725
MboI GATC 4 cut(s) 815, 908, 1174, 1723
MboII GAAGA 7 cut(s) 14, 403, 985, 1169, 1307, 1436, 2071
MfeI CAATTG 1 cut(s) 1866
MflI RGATCY 2 cut(s) 908, 1174
MhlI GDGCHC 5 cut(s) 201, 523, 670, 1642, 1879
MlsI TGGCCA 1 cut(s) 2096
MluNI TGGCCA 1 cut(s) 2096
MlyI GAGTC 3 cut(s) 63, 233, 1653
MmeI TCCRAC 7 cut(s) 204, 319, 409, 1078, 1369, 1579, 1672
Mox20I TGGCCA 1 cut(s) 2096
Mph1103I ATGCAT 1 cut(s) 1963
MroI TCCGGA 1 cut(s) 167
MroXI GAANNNNTTC 1 cut(s) 1671
MscI TGGCCA 1 cut(s) 2096
MslI CAYNNNNRTG 1 cut(s) 2146
Msp20I TGGCCA 1 cut(s) 2096
MspA1I CMGCKG 2 cut(s) 657, 1984
MspCI CTTAAG 1 cut(s) 1883
MspI CCGG 4 cut(s) 168, 174, 221, 2008
MspR9I CCNGG 3 cut(s) 174, 1157, 1955
MunI CAATTG 1 cut(s) 1866
Mva1269I GAATGC 2 cut(s) 857, 2141
MvaI CCWGG 2 cut(s) 1157, 1955
MvnI CGCG 5 cut(s) 46, 96, 115, 512, 657
NciI CCSGG 1 cut(s) 174
NdeI CATATG 1 cut(s) 1708
NdeII GATC 4 cut(s) 815, 908, 1174, 1723
NlaIII CATG 5 cut(s) 508, 845, 1363, 1730, 1778
NlaIV GGNNCC 7 cut(s) 172, 178, 272, 450, 653, 751, 1324
NmeAIII GCCGAG 1 cut(s) 267
NmuCI GTSAC 3 cut(s) 10, 190, 874
NsiI ATGCAT 1 cut(s) 1963
NspI RCATGY 1 cut(s) 1363
NspV TTCGAA 1 cut(s) 375
PagI TCATGA 1 cut(s) 1774
PceI AGGCCT 1 cut(s) 1155
PciI ACATGT 1 cut(s) 1359
PctI GAATGC 2 cut(s) 857, 2141
PdmI GAANNNNTTC 1 cut(s) 1671
PfeI GAWTC 6 cut(s) 98, 544, 660, 1010, 1860, 1966
PflMI CCANNNNNTGG 1 cut(s) 771
PfoI TCCNGGA 1 cut(s) 1953
PinAI ACCGGT 1 cut(s) 2007
PkrI GCNGC 9 cut(s) 37, 151, 240, 264, 329, 332, 1195, 1756, 1765
PleI GAGTC 3 cut(s) 63, 232, 1652
PpsI GAGTC 3 cut(s) 63, 232, 1652
Ppu21I YACGTR 2 cut(s) 163, 899
PscI ACATGT 1 cut(s) 1359
PshAI GACNNNNGTC 1 cut(s) 8
Psp124BI GAGCTC 2 cut(s) 523, 1879
Psp1406I AACGTT 1 cut(s) 1991
Psp6I CCWGG 2 cut(s) 1155, 1953
PspFI CCCAGC 1 cut(s) 255
PspGI CCWGG 2 cut(s) 1155, 1953
PspN4I GGNNCC 7 cut(s) 172, 178, 272, 450, 653, 751, 1324
PspPI GGNCC 3 cut(s) 170, 232, 652
PstI CTGCAG 2 cut(s) 332, 1198
PsuI RGATCY 2 cut(s) 908, 1174
RsaI GTAC 5 cut(s) 809, 901, 1287, 1543, 1551
RsaNI GTAC 5 cut(s) 808, 900, 1286, 1542, 1550
RseI CAYNNNNRTG 1 cut(s) 2146
SacI GAGCTC 2 cut(s) 523, 1879
SacII CCGCGG 1 cut(s) 658
SatI GCNGC 9 cut(s) 36, 150, 239, 263, 328, 331, 1194, 1755, 1764
Sau3AI GATC 4 cut(s) 815, 908, 1174, 1723
Sau96I GGNCC 3 cut(s) 170, 232, 652
ScaI AGTACT 2 cut(s) 1287, 1543
SchI GAGTC 3 cut(s) 63, 233, 1653
ScrFI CCNGG 3 cut(s) 174, 1157, 1955
SduI GDGCHC 5 cut(s) 201, 523, 670, 1642, 1879
SfaNI GCATC 3 cut(s) 772, 1921, 1948
SfcI CTRYAG 2 cut(s) 328, 1194
Sfr303I CCGCGG 1 cut(s) 658
SfuI TTCGAA 1 cut(s) 375
SgrBI CCGCGG 1 cut(s) 658
SinI GGWCC 3 cut(s) 170, 232, 652
SmiMI CAYNNNNRTG 1 cut(s) 2146
SmlI CTYRAG 3 cut(s) 281, 852, 1883
SmoI CTYRAG 3 cut(s) 281, 852, 1883
SnaBI TACGTA 1 cut(s) 899
SseBI AGGCCT 1 cut(s) 1155
SspI AATATT 1 cut(s) 1702
SspMI CTAG 4 cut(s) 1020, 1655, 1949, 2072
SstI GAGCTC 2 cut(s) 523, 1879
StuI AGGCCT 1 cut(s) 1155
StyD4I CCNGG 3 cut(s) 172, 1155, 1953
StyI CCWWGG 1 cut(s) 770
TaiI ACGT 6 cut(s) 165, 605, 901, 1567, 1828, 1994
TaqI TCGA 7 cut(s) 67, 213, 375, 517, 555, 1422, 2145
TaqII GACCGA 1 cut(s) 209
TatI WGTACW 4 cut(s) 807, 1285, 1541, 1549
TauI GCSGC 3 cut(s) 38, 152, 241
TfiI GAWTC 6 cut(s) 98, 544, 660, 1010, 1860, 1966
TscAI CASTG 6 cut(s) 37, 493, 979, 1203, 1818, 1927
TseFI GTSAC 3 cut(s) 10, 190, 874
TseI GCWGC 6 cut(s) 262, 327, 330, 1193, 1754, 1763
Tsp45I GTSAC 3 cut(s) 10, 190, 874
TspDTI ATGAA 9 cut(s) 497, 850, 1105, 1254, 1308, 1771, 1791, 1991, 2106
TspGWI ACGGA 1 cut(s) 893
TspRI CASTG 6 cut(s) 37, 493, 979, 1203, 1818, 1927
Van91I CCANNNNNTGG 1 cut(s) 771
Vha464I CTTAAG 1 cut(s) 1883
VpaK11BI GGWCC 3 cut(s) 170, 232, 652
XagI CCTNNNNNAGG 1 cut(s) 1952
XapI RAATTY 4 cut(s) 209, 1464, 1778, 1888
XceI RCATGY 1 cut(s) 1363
XcmI CCANNNNNNNNNTGG 1 cut(s) 1924
XmiI GTMKAC 1 cut(s) 1834
XmnI GAANNNNTTC 1 cut(s) 1671
XspI CTAG 4 cut(s) 1020, 1655, 1949, 2072
ZrmI AGTACT 2 cut(s) 1287, 1543
Zsp2I ATGCAT 1 cut(s) 1963
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.