RchiOBHm_Chr1g0366781
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
57232969 .. 57233488
520 bp
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UTR
Exon/CDS
Intron
PRQ59131

Sequence Viewer

Length: 180 bp
ATGGTCGATGGAAAATATCAAGCTCCCAAGGGTGTGCCCCAGTTACAGACTTGCTTTAGCATTGATGCCAATGATATCTTGAGTGTCTCTGCTGAGGATATTAACAGCGGCCACATCATGAAAGGGATTATAATTAACAGAGGCAGAACAACTTTTGATGGAATTGGGAAGATGAGGTGA
Functional Annotation

Protein Analysis

59

Amino Acids

6.41

Weight (kDa)

7.92

Isoelectric Point (pI)

34.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029620)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0366781 RchiOBHm_Chr1g0366831

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 131
AciI CCGC 1 cut(s) 108
AcoI YGGCCR 1 cut(s) 109
AluBI AGCT 1 cut(s) 23
AluI AGCT 1 cut(s) 23
Alw26I GTCTC 1 cut(s) 91
AoxI GGCC 1 cut(s) 109
BaeGI GKGCMC 1 cut(s) 39
BbvCI CCTCAGC 1 cut(s) 93
BccI CCATC 2 cut(s) 2, 152
BcoDI GTCTC 1 cut(s) 91
BisI GCNGC 1 cut(s) 109
BlsI GCNGC 1 cut(s) 110
BmrI ACTGGG 1 cut(s) 34
BmsI GCATC 1 cut(s) 55
BmuI ACTGGG 1 cut(s) 34
Bpu10I CCTNAGC 1 cut(s) 93
BpuEI CTTGAG 1 cut(s) 100
BsaJI CCNNGG 1 cut(s) 27
Bse1I ACTGG 1 cut(s) 40
BseDI CCNNGG 1 cut(s) 27
BseMII CTCAG 1 cut(s) 84
BseNI ACTGG 1 cut(s) 40
BseSI GKGCMC 1 cut(s) 39
BshFI GGCC 1 cut(s) 111
BsmAI GTCTC 1 cut(s) 91
BsnI GGCC 1 cut(s) 111
Bsp1286I GDGCHC 1 cut(s) 39
BspACI CCGC 1 cut(s) 108
BspANI GGCC 1 cut(s) 111
BspCNI CTCAG 1 cut(s) 85
BspHI TCATGA 1 cut(s) 117
BsrI ACTGG 1 cut(s) 40
BssECI CCNNGG 1 cut(s) 27
BssT1I CCWWGG 1 cut(s) 27
BstDEI CTNAG 1 cut(s) 93
BstMAI GTCTC 1 cut(s) 91
BstSLI GKGCMC 1 cut(s) 39
BsuRI GGCC 1 cut(s) 111
CciI TCATGA 1 cut(s) 117
CviAII CATG 1 cut(s) 118
CviJI RGCY 2 cut(s) 23, 111
CviKI_1 RGCY 2 cut(s) 23, 111
DdeI CTNAG 1 cut(s) 93
EaeI YGGCCR 1 cut(s) 109
Eco130I CCWWGG 1 cut(s) 27
Eco32I GATATC 1 cut(s) 76
EcoRV GATATC 1 cut(s) 76
EcoT14I CCWWGG 1 cut(s) 27
ErhI CCWWGG 1 cut(s) 27
FaeI CATG 1 cut(s) 121
FaiI YATR 2 cut(s) 119, 131
FatI CATG 1 cut(s) 117
Fnu4HI GCNGC 1 cut(s) 109
Fsp4HI GCNGC 1 cut(s) 109
GluI GCNGC 1 cut(s) 109
HaeIII GGCC 1 cut(s) 111
Hin1II CATG 1 cut(s) 121
Hpy188III TCNNGA 2 cut(s) 79, 118
HpyF3I CTNAG 1 cut(s) 93
Hsp92II CATG 1 cut(s) 121
LmnI GCTCC 1 cut(s) 28
LpnPI CCDG 1 cut(s) 53
LweI GCATC 1 cut(s) 55
MaeIII GTNAC 1 cut(s) 42
MhlI GDGCHC 1 cut(s) 39
MluCI AATT 2 cut(s) 132, 162
MnlI CCTC 3 cut(s) 88, 134, 168
MseI TTAA 2 cut(s) 102, 135
MspA1I CMGCKG 1 cut(s) 108
NlaIII CATG 1 cut(s) 121
PagI TCATGA 1 cut(s) 117
PkrI GCNGC 1 cut(s) 110
PsiI TTATAA 1 cut(s) 131
SaqAI TTAA 2 cut(s) 102, 135
SatI GCNGC 1 cut(s) 109
SduI GDGCHC 1 cut(s) 39
SetI ASST 2 cut(s) 25, 179
SfaNI GCATC 1 cut(s) 55
SgeI CNNG 6 cut(s) 32, 40, 52, 63, 91, 130
SmlI CTYRAG 1 cut(s) 79
SmoI CTYRAG 1 cut(s) 79
Sse9I AATT 2 cut(s) 132, 162
SsiI CCGC 1 cut(s) 108
StyI CCWWGG 1 cut(s) 27
TaqI TCGA 1 cut(s) 6
TasI AATT 2 cut(s) 132, 162
TauI GCSGC 1 cut(s) 111
Tru1I TTAA 2 cut(s) 102, 135
Tru9I TTAA 2 cut(s) 102, 135
TspDTI ATGAA 1 cut(s) 134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.