RchiOBHm_Chr1g0367341

protein serine/threonine kinase activity

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
57636939 .. 57638708
1770 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59181

Sequence Viewer

Length: 552 bp
ATGTTAATTGCTGTGAAGAGGATTAACCAAGAAGGTTTACAGGGTCACAAGGAATGGTTGACAGAAGTTTACTACCTAGGAAAGCTGCGTCATCCAAATCTTGTGACATTGTTGGGTTATTGCTTTGAGGATGATTGCCGGCTTCTGGTGTATGAATTCATGGCTCGTGGTAGCTTGGATAGTCATCTATATGGAAGTGATAGAAGCCATGTCTCAACAAGGGTGATGGGGACATATGGGTATGCAGCTCCCGAGTATATTGCTACAGGTCATTTAACCGGAAAGAATGATGCGTACGGTTTTGGAGTTGTTATGCTCGAATTGTTGTCTGGAAGACAAGTTCTGGACAGGAGCCTGCCAACCAAGGAAAAGAATCTAGTTGAATGGGCAAAACCATACCTTACCAGCAAACACAGAGTTCTCAAAATTTTTGTTGCTCGTATTAAAGGCCAGTATTATGTGTCTGCAGCTCGTAAAGCAGCTAACCTTGCAAATCAATGCTTATTAATATACCACAAGTTAAGGTCAAACATGAATGAGGTAGTAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

183

Amino Acids

20.87

Weight (kDa)

9.38

Isoelectric Point (pI)

24.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 2 - 63 3.7e-07 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 3 - 68 6.2e-10 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 72 - 182 3.3e-08 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029570)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0367341 RchiOBHm_Chr1g0367421

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 155, 426
AfaI GTAC 1 cut(s) 296
AfiI CCNNNNNNNGG 1 cut(s) 145
AgsI TTSAA 1 cut(s) 383
AloI GAACNNNNNNTCC 2 cut(s) 324, 356
AluBI AGCT 5 cut(s) 85, 174, 248, 470, 482
AluI AGCT 5 cut(s) 85, 174, 248, 470, 482
Alw26I GTCTC 1 cut(s) 217
Ama87I CYCGRG 1 cut(s) 251
AoxI GGCC 1 cut(s) 448
ApeKI GCWGC 4 cut(s) 85, 245, 467, 479
ApoI RAATTY 2 cut(s) 155, 426
AseI ATTAAT 1 cut(s) 506
AspA2I CCTAGG 1 cut(s) 76
AsuHPI GGTGA 1 cut(s) 235
AvaI CYCGRG 1 cut(s) 251
AvrII CCTAGG 1 cut(s) 76
BauI CACGAG 1 cut(s) 165
BbsI GAAGAC 1 cut(s) 340
BbvI GCAGC 4 cut(s) 72, 257, 479, 491
BccI CCATC 1 cut(s) 220
BcgI CGANNNNNNTGC 2 cut(s) 242, 276
BcoDI GTCTC 1 cut(s) 217
BfaI CTAG 2 cut(s) 77, 377
BfmI CTRYAG 2 cut(s) 264, 465
BisI GCNGC 4 cut(s) 86, 246, 468, 480
BlnI CCTAGG 1 cut(s) 76
BlsI GCNGC 4 cut(s) 87, 247, 469, 481
BmeT110I CYCGRG 1 cut(s) 251
BmiI GGNNCC 1 cut(s) 353
BmsI GCATC 1 cut(s) 280
BpiI GAAGAC 1 cut(s) 340
BsaBI GATNNNNATC 1 cut(s) 183
BsaJI CCNNGG 2 cut(s) 76, 363
BsaWI WCCGGW 1 cut(s) 278
Bsc4I CCNNNNNNNGG 1 cut(s) 145
Bse118I RCCGGY 1 cut(s) 138
Bse1I ACTGG 1 cut(s) 451
Bse8I GATNNNNATC 1 cut(s) 183
BseDI CCNNGG 2 cut(s) 76, 363
BseGI GGATG 2 cut(s) 91, 136
BseJI GATNNNNATC 1 cut(s) 183
BseLI CCNNNNNNNGG 1 cut(s) 145
BseNI ACTGG 1 cut(s) 451
BseXI GCAGC 4 cut(s) 72, 257, 479, 491
BshFI GGCC 1 cut(s) 450
BsiHKCI CYCGRG 1 cut(s) 251
BsiSI CCGG 2 cut(s) 139, 279
BsiWI CGTACG 1 cut(s) 294
BslFI GGGAC 1 cut(s) 244
BslI CCNNNNNNNGG 1 cut(s) 145
BsmAI GTCTC 1 cut(s) 217
BsmFI GGGAC 1 cut(s) 244
BsnI GGCC 1 cut(s) 450
BsoBI CYCGRG 1 cut(s) 251
BspANI GGCC 1 cut(s) 450
BspLI GGNNCC 1 cut(s) 353
BspMAI CTGCAG 1 cut(s) 469
BsrFI RCCGGY 1 cut(s) 138
BsrI ACTGG 1 cut(s) 451
BssAI RCCGGY 1 cut(s) 138
BssECI CCNNGG 2 cut(s) 76, 363
BssSI CACGAG 1 cut(s) 165
BssT1I CCWWGG 2 cut(s) 76, 363
Bst2BI CACGAG 1 cut(s) 165
Bst4CI ACNGT 1 cut(s) 299
Bst6I CTCTTC 1 cut(s) 11
BstC8I GCNNGC 2 cut(s) 140, 356
BstF5I GGATG 2 cut(s) 91, 136
BstMAI GTCTC 1 cut(s) 217
BstMWI GCNNNNNNNGC 2 cut(s) 476, 488
BstSFI CTRYAG 2 cut(s) 264, 465
BstV1I GCAGC 4 cut(s) 72, 257, 479, 491
BstV2I GAAGAC 1 cut(s) 340
BsuRI GGCC 1 cut(s) 450
BtsCI GGATG 2 cut(s) 91, 136
Cac8I GCNNGC 2 cut(s) 140, 356
Cfr10I RCCGGY 1 cut(s) 138
CseI GACGC 1 cut(s) 77
Csp6I GTAC 1 cut(s) 295
CviAII CATG 3 cut(s) 160, 209, 532
CviQI GTAC 1 cut(s) 295
Eam1104I CTCTTC 1 cut(s) 11
EarI CTCTTC 1 cut(s) 11
Eco130I CCWWGG 2 cut(s) 76, 363
Eco88I CYCGRG 1 cut(s) 251
EcoRI GAATTC 1 cut(s) 155
EcoT14I CCWWGG 2 cut(s) 76, 363
ErhI CCWWGG 2 cut(s) 76, 363
FaeI CATG 3 cut(s) 163, 212, 535
FaqI GGGAC 1 cut(s) 244
FatI CATG 3 cut(s) 159, 208, 531
FauNDI CATATG 1 cut(s) 235
Fnu4HI GCNGC 4 cut(s) 86, 246, 468, 480
FokI GGATG 2 cut(s) 78, 143
Fsp4HI GCNGC 4 cut(s) 86, 246, 468, 480
FspBI CTAG 2 cut(s) 77, 377
GluI GCNGC 4 cut(s) 86, 246, 468, 480
HaeIII GGCC 1 cut(s) 450
HapII CCGG 2 cut(s) 139, 279
HgaI GACGC 1 cut(s) 77
Hin1II CATG 3 cut(s) 163, 212, 535
HincII GTYRAC 1 cut(s) 60
HindII GTYRAC 1 cut(s) 60
HinfI GANTC 1 cut(s) 373
HpaII CCGG 2 cut(s) 139, 279
HphI GGTGA 1 cut(s) 235
Hpy166II GTNNAC 3 cut(s) 38, 60, 70
Hpy188III TCNNGA 3 cut(s) 251, 330, 344
Hpy8I GTNNAC 3 cut(s) 38, 60, 70
HpyAV CCTTC 1 cut(s) 26
HpyCH4III ACNGT 1 cut(s) 299
HpyCH4V TGCA 3 cut(s) 245, 467, 491
HpyF10VI GCNNNNNNNGC 2 cut(s) 476, 488
Hsp92II CATG 3 cut(s) 163, 212, 535
KroI GCCGGC 1 cut(s) 138
KroNI GCCGGC 1 cut(s) 140
LmnI GCTCC 2 cut(s) 253, 351
Lsp1109I GCAGC 4 cut(s) 72, 257, 479, 491
LweI GCATC 1 cut(s) 280
MaeI CTAG 2 cut(s) 77, 377
MaeIII GTNAC 2 cut(s) 44, 103
MboII GAAGA 2 cut(s) 28, 345
MluCI AATT 5 cut(s) 6, 155, 320, 426, 547
MnlI CCTC 3 cut(s) 12, 121, 532
MroNI GCCGGC 1 cut(s) 138
MseI TTAA 7 cut(s) 5, 24, 275, 444, 506, 521, 550
MslI CAYNNNNRTG 1 cut(s) 189
MspI CCGG 2 cut(s) 139, 279
MwoI GCNNNNNNNGC 2 cut(s) 476, 488
NaeI GCCGGC 1 cut(s) 140
NdeI CATATG 1 cut(s) 235
NgoMIV GCCGGC 1 cut(s) 138
NlaIII CATG 3 cut(s) 163, 212, 535
NlaIV GGNNCC 1 cut(s) 353
NmuCI GTSAC 2 cut(s) 44, 103
PdiI GCCGGC 1 cut(s) 140
PfeI GAWTC 1 cut(s) 373
Pfl23II CGTACG 1 cut(s) 294
PkrI GCNGC 4 cut(s) 87, 247, 469, 481
PshBI ATTAAT 1 cut(s) 506
PspLI CGTACG 1 cut(s) 294
PspN4I GGNNCC 1 cut(s) 353
PstI CTGCAG 1 cut(s) 469
RsaI GTAC 1 cut(s) 296
RsaNI GTAC 1 cut(s) 295
RseI CAYNNNNRTG 1 cut(s) 189
SaqAI TTAA 7 cut(s) 5, 24, 275, 444, 506, 521, 550
SatI GCNGC 4 cut(s) 86, 246, 468, 480
SfaNI GCATC 1 cut(s) 280
SfcI CTRYAG 2 cut(s) 264, 465
SmiMI CAYNNNNRTG 1 cut(s) 189
Sse9I AATT 5 cut(s) 6, 155, 320, 426, 547
SspMI CTAG 2 cut(s) 77, 377
StyI CCWWGG 2 cut(s) 76, 363
TaaI ACNGT 1 cut(s) 299
TaqI TCGA 1 cut(s) 318
TasI AATT 5 cut(s) 6, 155, 320, 426, 547
TfiI GAWTC 1 cut(s) 373
Tru1I TTAA 7 cut(s) 5, 24, 275, 444, 506, 521, 550
Tru9I TTAA 7 cut(s) 5, 24, 275, 444, 506, 521, 550
TseFI GTSAC 2 cut(s) 44, 103
TseI GCWGC 4 cut(s) 85, 245, 467, 479
Tsp45I GTSAC 2 cut(s) 44, 103
TspDTI ATGAA 3 cut(s) 148, 168, 548
VspI ATTAAT 1 cut(s) 506
XapI RAATTY 2 cut(s) 155, 426
XmaJI CCTAGG 1 cut(s) 76
XspI CTAG 2 cut(s) 77, 377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.