RchiOBHm_Chr2g0085011

pyrophosphate-energized membrane proton pump

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
595887 .. 597934
2048 bp
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UTR
Exon/CDS
Intron
PRQ46057

Sequence Viewer

Length: 222 bp
ATGAAGGTGATCGCTGCATATTTGCTCGCTGTGTTGGGTGGCAAGACCAGCCCTAGAATCTGCCGAAGACATCCTTGGCGCCGGAGCTTTCTGTTCGGAGTTTTCTGTTCAGTTCGTGGGTATGTTGGGATGTGGGTATCAGTTCGTGCCAATGTCTGGAGACAGTCTGCAAGGGAGGCATTGCAGATTTGCAGCAACCTCATTCAAGTTGGTGACTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

73

Amino Acids

8.35

Weight (kDa)

10.88

Isoelectric Point (pI)

44.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029900)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr2g0085011 RchiOBHm_Chr6g0311821

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 78
AccB7I CCANNNNNTGG 1 cut(s) 156
AcyI GRCGYC 1 cut(s) 79
AfiI CCNNNNNNNGG 1 cut(s) 156
AgsI TTSAA 1 cut(s) 206
AjuI GAANNNNNNNTTGG 2 cut(s) 58, 90
AluBI AGCT 1 cut(s) 87
AluI AGCT 1 cut(s) 87
Alw26I GTCTC 1 cut(s) 154
ApeKI GCWGC 2 cut(s) 14, 192
AspLEI GCGC 1 cut(s) 81
AsuHPI GGTGA 1 cut(s) 19
BanI GGYRCC 1 cut(s) 78
BbsI GAAGAC 1 cut(s) 73
BbvI GCAGC 1 cut(s) 204
BcoDI GTCTC 1 cut(s) 154
BfaI CTAG 1 cut(s) 54
BfoI RGCGCY 1 cut(s) 82
BisI GCNGC 2 cut(s) 15, 193
BlsI GCNGC 2 cut(s) 16, 194
BmiI GGNNCC 1 cut(s) 80
BpiI GAAGAC 1 cut(s) 73
BpmI CTGGAG 1 cut(s) 178
BsaHI GRCGYC 1 cut(s) 79
BsaJI CCNNGG 1 cut(s) 74
Bsc4I CCNNNNNNNGG 1 cut(s) 156
Bse3DI GCAATG 1 cut(s) 179
BseDI CCNNGG 1 cut(s) 74
BseGI GGATG 2 cut(s) 70, 135
BseLI CCNNNNNNNGG 1 cut(s) 156
BseMI GCAATG 1 cut(s) 179
BseXI GCAGC 1 cut(s) 204
BshNI GGYRCC 1 cut(s) 78
BsiSI CCGG 1 cut(s) 82
BslI CCNNNNNNNGG 1 cut(s) 156
BsmAI GTCTC 1 cut(s) 154
Bsp143I GATC 1 cut(s) 9
BspLI GGNNCC 1 cut(s) 80
BspT107I GGYRCC 1 cut(s) 78
BsrDI GCAATG 1 cut(s) 179
BssECI CCNNGG 1 cut(s) 74
BssMI GATC 1 cut(s) 9
BssNI GRCGYC 1 cut(s) 79
BssT1I CCWWGG 1 cut(s) 74
Bst4CI ACNGT 1 cut(s) 165
BstACI GRCGYC 1 cut(s) 79
BstC8I GCNNGC 1 cut(s) 27
BstF5I GGATG 2 cut(s) 70, 135
BstH2I RGCGCY 1 cut(s) 82
BstHHI GCGC 1 cut(s) 81
BstKTI GATC 1 cut(s) 12
BstMAI GTCTC 1 cut(s) 154
BstMBI GATC 1 cut(s) 9
BstMWI GCNNNNNNNGC 2 cut(s) 48, 176
BstV1I GCAGC 1 cut(s) 204
BstV2I GAAGAC 1 cut(s) 73
BtsCI GGATG 2 cut(s) 70, 135
Cac8I GCNNGC 1 cut(s) 27
CfoI GCGC 1 cut(s) 81
CviJI RGCY 2 cut(s) 51, 87
CviKI_1 RGCY 2 cut(s) 51, 87
DinI GGCGCC 1 cut(s) 80
DpnI GATC 1 cut(s) 11
DpnII GATC 1 cut(s) 9
Eco130I CCWWGG 1 cut(s) 74
EcoT14I CCWWGG 1 cut(s) 74
EgeI GGCGCC 1 cut(s) 80
EheI GGCGCC 1 cut(s) 80
ErhI CCWWGG 1 cut(s) 74
FaiI YATR 2 cut(s) 19, 123
FalI AAGNNNNNCTT 2 cut(s) 58, 90
Fnu4HI GCNGC 2 cut(s) 15, 193
FokI GGATG 2 cut(s) 57, 142
Fsp4HI GCNGC 2 cut(s) 15, 193
FspBI CTAG 1 cut(s) 54
GlaI GCGC 1 cut(s) 80
GluI GCNGC 2 cut(s) 15, 193
GsuI CTGGAG 1 cut(s) 178
HaeII RGCGCY 1 cut(s) 82
HapII CCGG 1 cut(s) 82
HhaI GCGC 1 cut(s) 81
Hin1I GRCGYC 1 cut(s) 79
Hin6I GCGC 1 cut(s) 79
HinP1I GCGC 1 cut(s) 79
HinfI GANTC 1 cut(s) 57
HpaII CCGG 1 cut(s) 82
HphI GGTGA 1 cut(s) 19
Hpy188I TCNGA 1 cut(s) 98
Hpy188III TCNNGA 1 cut(s) 157
HpyCH4III ACNGT 1 cut(s) 165
HpyCH4V TGCA 4 cut(s) 17, 170, 184, 192
HpyF10VI GCNNNNNNNGC 2 cut(s) 48, 176
Hsp92I GRCGYC 1 cut(s) 79
HspAI GCGC 1 cut(s) 79
KasI GGCGCC 1 cut(s) 78
Kzo9I GATC 1 cut(s) 9
LmnI GCTCC 1 cut(s) 84
LpnPI CCDG 3 cut(s) 61, 95, 142
Lsp1109I GCAGC 1 cut(s) 204
MaeI CTAG 1 cut(s) 54
MaeIII GTNAC 1 cut(s) 212
MalI GATC 1 cut(s) 11
MboI GATC 1 cut(s) 9
MboII GAAGA 1 cut(s) 78
Mly113I GGCGCC 1 cut(s) 79
MnlI CCTC 2 cut(s) 169, 209
MspI CCGG 1 cut(s) 82
MwoI GCNNNNNNNGC 2 cut(s) 48, 176
NarI GGCGCC 1 cut(s) 79
NdeII GATC 1 cut(s) 9
NlaIV GGNNCC 1 cut(s) 80
NmuCI GTSAC 1 cut(s) 212
PfeI GAWTC 1 cut(s) 57
PflMI CCANNNNNTGG 1 cut(s) 156
PkrI GCNGC 2 cut(s) 16, 194
PluTI GGCGCC 1 cut(s) 82
PspN4I GGNNCC 1 cut(s) 80
SatI GCNGC 2 cut(s) 15, 193
Sau3AI GATC 1 cut(s) 9
SetI ASST 3 cut(s) 9, 89, 201
SfoI GGCGCC 1 cut(s) 80
SspDI GGCGCC 1 cut(s) 78
SspMI CTAG 1 cut(s) 54
StyI CCWWGG 1 cut(s) 74
TaaI ACNGT 1 cut(s) 165
TfiI GAWTC 1 cut(s) 57
TseFI GTSAC 1 cut(s) 212
TseI GCWGC 2 cut(s) 14, 192
Tsp45I GTSAC 1 cut(s) 212
TspDTI ATGAA 1 cut(s) 17
Van91I CCANNNNNTGG 1 cut(s) 156
XspI CTAG 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.