RchiOBHm_Chr2g0086521
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
1646582 .. 1649034
2453 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46203

Sequence Viewer

Length: 1545 bp
ATGCCAGGTGGGTCTTTTGCTCCGGCCGGCGTGGCCAAGGACCGAGCAGAGCAGTACCAAGGCAGGCTCACCGGTTATGTCATCGTCGCAAGCATTGTTGCTGCCACCGGTGGCTCACTTTTCGGTTATGACATCGGAATTTCAGGTGGGGTTACATCAATGGATGGATTTCTGGAAAAGTTTTTCAAAACAGTTTACAAGAAGAAGAAGCTTGCACATGAAAACAATTACTGCAAGTATGACAACCAAGGTCTCTCGGCATTTACATCTTCACTATATCTTGCTGGTTTAGTCTCATCTTTAGTGGCTTCTCCTATCACAAGAAATTATGGGCGCCGCATAAGTATAATCTGTGGTGGAATCAGTTTCCTTATTGGAGCAACTCTAAATGCTGCAGCTGTTAATGTCATCATGCTCATCTTGGGTCGGATCATGCTTGGTGTTGGTATCGGATTTGGAAATCAGGCTATTCCACTTTATCTATCGGAGATGGCACCAACTCATCTCCGAGGAGGAGTCAACATGATGTTTCAGCTAGCAACTACTCTTGGAATTTTCACTGCAAACATGATCAACTATGGAACTTCAAGGCTCGAACCATGGGGGTGGAGGCTCTCTCTAGGCCTGGCATTAGCACCTGCTCTAGTGATGACAGTGGGAGGAATGTTTCTTCCTGAGACACCGAATAGCATGATCGAACAGGGATCGATAGACAAAGGAAGAAAGCTTCTAGAGAAAATCCGAGGAGTTGAAAATGTGAATGCAGAGTTTCAGGACATGGTGGATGCAAGTGAGTTTGCTAATTCCATAAAGAATCCATTCAGGAACATACTTGAGAGAAGAAACAGACCTCAGTTGGTTATGGCAATCTTCATGCCTACATTTCAGATCCTGACGGGCATAAATTCGATTCTCTTCTATGCACCAGTATTGTTTCAAAGTATGGGATTTGGGGGAGATGCATCTCTCTACTCATCAGCCTTGACTGGAGGAGTTCTTTGCTTATCTACACTACTATCTATAGCAACAGTTGACAAACTGGGTCGGAGATTTTTACTCATCAGTGGTGGAATAGTAATGATTACCTGCCAGGTCATAGTGGCAATAATCTTGGGGGTTAAATTTGGCGAGAATCAAGTGCTGTCGAAAGGGTACTCAATATTGGTCGTGGCGGTGATTTGCCTCTTTGTGATAGCTTTCGGGTGGTCATGGGGGCCGCTTGGCTGGACAGTGCCGAGTGAGATATTCCCACTGGAAACCAGATCAGCTGGACAGAGCATCACAGTGGCTGTGAACCTTTTCTTCACTTTCGTCATAGCACAGGCGTTTCTTGCTATGCTATGCGCGTTCAAATTCGGGATCTTCCTGTTCTTTGCTGGTTGGATTACTGTCATGACCATCTTTGTTTATGTATTCCTGCCTGAAACGAAGGGAGTTCCTATTGAGGAGATGATACTCCTCTGGCGAAGGCACTGGTTTTGGAAGAAGATAGTGCCTGAATATGCCGAAGAAGATAGCAGTAGGGGAAACAATTCAACAGTGTAG

Protein Analysis

514

Amino Acids

56.02

Weight (kDa)

9.17

Isoelectric Point (pI)

37.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 31 - 485 1.7e-118 Sugar (and other) transporter
MFS_1 PF07690 86 - 432 6.3e-25 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013485)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 646
Acc36I ACCTGC 2 cut(s) 646, 1094
AccB1I GGYRCC 2 cut(s) 333, 493
AccII CGCG 1 cut(s) 1346
AciI CCGC 3 cut(s) 337, 1172, 1217
AclWI GGATC 4 cut(s) 437, 712, 883, 1367
AcoI YGGCCR 2 cut(s) 24, 33
AcsI RAATTY 5 cut(s) 138, 552, 904, 1121, 1352
AcyI GRCGYC 1 cut(s) 334
AfaI GTAC 2 cut(s) 56, 1154
AgeI ACCGGT 2 cut(s) 71, 107
AgsI TTSAA 6 cut(s) 187, 588, 752, 938, 1351, 1536
AjnI CCWGG 3 cut(s) 4, 624, 1089
AluBI AGCT 6 cut(s) 211, 398, 535, 727, 1196, 1268
AluI AGCT 6 cut(s) 211, 398, 535, 727, 1196, 1268
Alw26I GTCTC 3 cut(s) 257, 298, 671
AlwI GGATC 4 cut(s) 437, 712, 883, 1367
AlwNI CAGNNNCTG 2 cut(s) 892, 1289
AoxI GGCC 4 cut(s) 24, 33, 622, 1214
ApeKI GCWGC 3 cut(s) 101, 392, 395
ApoI RAATTY 5 cut(s) 138, 552, 904, 1121, 1352
AsiGI ACCGGT 2 cut(s) 71, 107
Asp700I GAANNNNTTC 3 cut(s) 818, 1298, 1531
AspLEI GCGC 2 cut(s) 336, 1346
AspS9I GGNCC 2 cut(s) 40, 1214
AsuHPI GGTGA 2 cut(s) 61, 1186
AsuNHI GCTAGC 1 cut(s) 535
AvaII GGWCC 1 cut(s) 40
BalI TGGCCA 1 cut(s) 35
BanI GGYRCC 2 cut(s) 333, 493
BbvI GCAGC 3 cut(s) 88, 379, 407
BccI CCATC 3 cut(s) 158, 484, 1406
BciT130I CCWGG 3 cut(s) 6, 626, 1091
BclI TGATCA 1 cut(s) 570
BcoDI GTCTC 3 cut(s) 257, 298, 671
BfaI CTAG 4 cut(s) 536, 620, 644, 731
BfmI CTRYAG 2 cut(s) 393, 1020
BfoI RGCGCY 1 cut(s) 337
BfuAI ACCTGC 2 cut(s) 646, 1094
BglI GCCNNNNNGGC 1 cut(s) 32
BisI GCNGC 5 cut(s) 102, 337, 393, 396, 1217
BlsI GCNGC 5 cut(s) 103, 338, 394, 397, 1218
Bme1390I CCNGG 3 cut(s) 6, 626, 1091
Bme18I GGWCC 1 cut(s) 40
BmgT120I GGNCC 2 cut(s) 40, 1214
BmiI GGNNCC 3 cut(s) 335, 495, 1215
BmrFI CCNGG 3 cut(s) 6, 626, 1091
BmrI ACTGGG 1 cut(s) 1049
BmsI GCATC 4 cut(s) 775, 949, 971, 1287
BmtI GCTAGC 1 cut(s) 539
BmuI ACTGGG 1 cut(s) 1049
BplI GAGNNNNNCTC 2 cut(s) 601, 633
BpmI CTGGAG 1 cut(s) 1008
BpuEI CTTGAG 1 cut(s) 854
Bsa29I ATCGAT 1 cut(s) 707
BsaHI GRCGYC 1 cut(s) 334
BsaI GGTCTC 1 cut(s) 257
BsaJI CCNNGG 6 cut(s) 36, 58, 247, 508, 599, 742
BsaWI WCCGGW 2 cut(s) 71, 107
Bse118I RCCGGY 3 cut(s) 26, 71, 107
Bse1I ACTGG 5 cut(s) 926, 991, 1044, 1257, 1478
BseBI CCWGG 3 cut(s) 6, 626, 1091
BseCI ATCGAT 1 cut(s) 707
BseDI CCNNGG 6 cut(s) 36, 58, 247, 508, 599, 742
BseGI GGATG 2 cut(s) 169, 790
BseMII CTCAG 2 cut(s) 666, 866
BseNI ACTGG 5 cut(s) 926, 991, 1044, 1257, 1478
BseRI GAGGAG 6 cut(s) 525, 528, 759, 1005, 1448, 1460
BseX3I CGGCCG 1 cut(s) 24
BseXI GCAGC 3 cut(s) 88, 379, 407
Bsh1236I CGCG 1 cut(s) 1346
Bsh1285I CGRYCG 1 cut(s) 27
BshFI GGCC 4 cut(s) 26, 35, 624, 1216
BshNI GGYRCC 2 cut(s) 333, 493
BshTI ACCGGT 2 cut(s) 71, 107
BshVI ATCGAT 1 cut(s) 707
BsiEI CGRYCG 1 cut(s) 27
BsiSI CCGG 4 cut(s) 23, 27, 72, 108
BsmAI GTCTC 3 cut(s) 257, 298, 671
BsmI GAATGC 1 cut(s) 766
BsnI GGCC 4 cut(s) 26, 35, 624, 1216
Bso31I GGTCTC 1 cut(s) 257
Bsp143I GATC 7 cut(s) 429, 570, 693, 704, 888, 1262, 1359
Bsp19I CCATGG 1 cut(s) 599
BspACI CCGC 3 cut(s) 337, 1172, 1217
BspANI GGCC 4 cut(s) 26, 35, 624, 1216
BspCNI CTCAG 2 cut(s) 667, 865
BspDI ATCGAT 1 cut(s) 707
BspFNI CGCG 1 cut(s) 1346
BspHI TCATGA 1 cut(s) 1392
BspLI GGNNCC 3 cut(s) 335, 495, 1215
BspMAI CTGCAG 1 cut(s) 397
BspMI ACCTGC 2 cut(s) 646, 1094
BspOI GCTAGC 1 cut(s) 539
BspPI GGATC 4 cut(s) 437, 712, 883, 1367
BspT107I GGYRCC 2 cut(s) 333, 493
BspTNI GGTCTC 1 cut(s) 257
BsrFI RCCGGY 3 cut(s) 26, 71, 107
BsrI ACTGG 5 cut(s) 926, 991, 1044, 1257, 1478
BssAI RCCGGY 3 cut(s) 26, 71, 107
BssECI CCNNGG 6 cut(s) 36, 58, 247, 508, 599, 742
BssMI GATC 7 cut(s) 429, 570, 693, 704, 888, 1262, 1359
BssNI GRCGYC 1 cut(s) 334
BssT1I CCWWGG 4 cut(s) 36, 58, 247, 599
Bst2UI CCWGG 3 cut(s) 6, 626, 1091
Bst4CI ACNGT 7 cut(s) 193, 655, 1030, 1231, 1285, 1390, 1540
Bst6I CTCTTC 1 cut(s) 920
BstACI GRCGYC 1 cut(s) 334
BstC8I GCNNGC 5 cut(s) 28, 65, 91, 213, 537
BstDEI CTNAG 2 cut(s) 675, 852
BstDSI CCRYGG 1 cut(s) 599
BstF5I GGATG 2 cut(s) 169, 790
BstFNI CGCG 1 cut(s) 1346
BstH2I RGCGCY 1 cut(s) 337
BstHHI GCGC 2 cut(s) 336, 1346
BstKTI GATC 7 cut(s) 432, 573, 696, 707, 891, 1265, 1362
BstMAI GTCTC 3 cut(s) 257, 298, 671
BstMBI GATC 7 cut(s) 429, 570, 693, 704, 888, 1262, 1359
BstMCI CGRYCG 1 cut(s) 27
BstMWI GCNNNNNNNGC 2 cut(s) 32, 1331
BstNI CCWGG 3 cut(s) 6, 626, 1091
BstSCI CCNGG 3 cut(s) 4, 624, 1089
BstSFI CTRYAG 2 cut(s) 393, 1020
BstUI CGCG 1 cut(s) 1346
BstV1I GCAGC 3 cut(s) 88, 379, 407
BstX2I RGATCY 2 cut(s) 888, 1359
BstXI CCANNNNNNTGG 1 cut(s) 606
BstYI RGATCY 2 cut(s) 888, 1359
BstZI CGGCCG 1 cut(s) 24
Bsu15I ATCGAT 1 cut(s) 707
BsuRI GGCC 4 cut(s) 26, 35, 624, 1216
BsuTUI ATCGAT 1 cut(s) 707
BtgI CCRYGG 1 cut(s) 599
BtsCI GGATG 2 cut(s) 169, 790
BtsI GCAGTG 1 cut(s) 558
BtsIMutI CAGTG 8 cut(s) 558, 660, 1069, 1236, 1250, 1290, 1471, 1545
BveI ACCTGC 2 cut(s) 646, 1094
Cac8I GCNNGC 5 cut(s) 28, 65, 91, 213, 537
CaiI CAGNNNCTG 2 cut(s) 892, 1289
CciI TCATGA 1 cut(s) 1392
CfoI GCGC 2 cut(s) 336, 1346
Cfr10I RCCGGY 3 cut(s) 26, 71, 107
Cfr13I GGNCC 2 cut(s) 40, 1214
ClaI ATCGAT 1 cut(s) 707
Csp6I GTAC 2 cut(s) 55, 1153
CspAI ACCGGT 2 cut(s) 71, 107
CviQI GTAC 2 cut(s) 55, 1153
DdeI CTNAG 2 cut(s) 675, 852
DinI GGCGCC 1 cut(s) 335
DpnI GATC 7 cut(s) 431, 572, 695, 706, 890, 1264, 1361
DpnII GATC 7 cut(s) 429, 570, 693, 704, 888, 1262, 1359
EaeI YGGCCR 2 cut(s) 24, 33
EagI CGGCCG 1 cut(s) 24
Eam1104I CTCTTC 1 cut(s) 920
EarI CTCTTC 1 cut(s) 920
EclXI CGGCCG 1 cut(s) 24
Eco130I CCWWGG 4 cut(s) 36, 58, 247, 599
Eco147I AGGCCT 1 cut(s) 624
Eco31I GGTCTC 1 cut(s) 257
Eco47I GGWCC 1 cut(s) 40
Eco52I CGGCCG 1 cut(s) 24
EcoRII CCWGG 3 cut(s) 4, 624, 1089
EcoT14I CCWWGG 4 cut(s) 36, 58, 247, 599
EcoT22I ATGCAT 1 cut(s) 964
EgeI GGCGCC 1 cut(s) 335
EheI GGCGCC 1 cut(s) 335
ErhI CCWWGG 4 cut(s) 36, 58, 247, 599
FbaI TGATCA 1 cut(s) 570
Fnu4HI GCNGC 5 cut(s) 102, 337, 393, 396, 1217
FokI GGATG 2 cut(s) 176, 797
Fsp4HI GCNGC 5 cut(s) 102, 337, 393, 396, 1217
FspBI CTAG 4 cut(s) 536, 620, 644, 731
GlaI GCGC 2 cut(s) 335, 1345
GluI GCNGC 5 cut(s) 102, 337, 393, 396, 1217
GsuI CTGGAG 1 cut(s) 1008
HaeII RGCGCY 1 cut(s) 337
HaeIII GGCC 4 cut(s) 26, 35, 624, 1216
HapII CCGG 4 cut(s) 23, 27, 72, 108
HhaI GCGC 2 cut(s) 336, 1346
Hin1I GRCGYC 1 cut(s) 334
Hin6I GCGC 2 cut(s) 334, 1344
HinP1I GCGC 2 cut(s) 334, 1344
HincII GTYRAC 2 cut(s) 520, 1033
HindII GTYRAC 2 cut(s) 520, 1033
HindIII AAGCTT 2 cut(s) 209, 725
HinfI GANTC 5 cut(s) 360, 516, 814, 910, 1132
HpaII CCGG 4 cut(s) 23, 27, 72, 108
HphI GGTGA 2 cut(s) 61, 1186
Hpy166II GTNNAC 4 cut(s) 196, 520, 1033, 1294
Hpy188I TCNGA 8 cut(s) 137, 429, 452, 487, 509, 743, 888, 1047
Hpy188III TCNNGA 8 cut(s) 173, 674, 731, 773, 823, 892, 1357, 1393
Hpy8I GTNNAC 4 cut(s) 196, 520, 1033, 1294
Hpy99I CGWCG 1 cut(s) 89
HpyAV CCTTC 2 cut(s) 1423, 1461
HpyCH4III ACNGT 7 cut(s) 193, 655, 1030, 1231, 1285, 1390, 1540
HpyCH4V TGCA 8 cut(s) 215, 234, 395, 563, 764, 788, 923, 962
HpyF10VI GCNNNNNNNGC 2 cut(s) 32, 1331
HpyF3I CTNAG 2 cut(s) 675, 852
Hsp92I GRCGYC 1 cut(s) 334
HspAI GCGC 2 cut(s) 334, 1344
KasI GGCGCC 1 cut(s) 333
KroI GCCGGC 1 cut(s) 26
KroNI GCCGGC 1 cut(s) 28
Ksp22I TGATCA 1 cut(s) 570
Kzo9I GATC 7 cut(s) 429, 570, 693, 704, 888, 1262, 1359
LmnI GCTCC 2 cut(s) 25, 377
Lsp1109I GCAGC 3 cut(s) 88, 379, 407
LweI GCATC 4 cut(s) 775, 949, 971, 1287
MaeI CTAG 4 cut(s) 536, 620, 644, 731
MaeIII GTNAC 1 cut(s) 151
MalI GATC 7 cut(s) 431, 572, 695, 706, 890, 1264, 1361
MboI GATC 7 cut(s) 429, 570, 693, 704, 888, 1262, 1359
MflI RGATCY 2 cut(s) 888, 1359
MlsI TGGCCA 1 cut(s) 35
MluCI AATT 9 cut(s) 138, 226, 325, 552, 802, 904, 1121, 1352, 1531
MluNI TGGCCA 1 cut(s) 35
Mly113I GGCGCC 1 cut(s) 334
MlyI GAGTC 1 cut(s) 525
MmeI TCCRAC 3 cut(s) 407, 1025, 1361
Mox20I TGGCCA 1 cut(s) 35
Mph1103I ATGCAT 1 cut(s) 964
MroNI GCCGGC 1 cut(s) 26
MroXI GAANNNNTTC 3 cut(s) 818, 1298, 1531
MscI TGGCCA 1 cut(s) 35
MseI TTAA 2 cut(s) 402, 1119
MslI CAYNNNNRTG 2 cut(s) 604, 1283
Msp20I TGGCCA 1 cut(s) 35
MspA1I CMGCKG 2 cut(s) 398, 1268
MspI CCGG 4 cut(s) 23, 27, 72, 108
MspR9I CCNGG 3 cut(s) 6, 626, 1091
Mva1269I GAATGC 1 cut(s) 766
MvaI CCWGG 3 cut(s) 6, 626, 1091
MvnI CGCG 1 cut(s) 1346
MwoI GCNNNNNNNGC 2 cut(s) 32, 1331
NaeI GCCGGC 1 cut(s) 28
NarI GGCGCC 1 cut(s) 334
NcoI CCATGG 1 cut(s) 599
NdeII GATC 7 cut(s) 429, 570, 693, 704, 888, 1262, 1359
NgoMIV GCCGGC 1 cut(s) 26
NheI GCTAGC 1 cut(s) 535
NlaIV GGNNCC 3 cut(s) 335, 495, 1215
NmeAIII GCCGAG 2 cut(s) 236, 1260
NsiI ATGCAT 1 cut(s) 964
PagI TCATGA 1 cut(s) 1392
PaqCI CACCTGC 1 cut(s) 646
PceI AGGCCT 1 cut(s) 624
PctI GAATGC 1 cut(s) 766
PdiI GCCGGC 1 cut(s) 28
PdmI GAANNNNTTC 3 cut(s) 818, 1298, 1531
PfeI GAWTC 4 cut(s) 360, 814, 910, 1132
PinAI ACCGGT 2 cut(s) 71, 107
PkrI GCNGC 5 cut(s) 103, 338, 394, 397, 1218
PleI GAGTC 1 cut(s) 524
PluTI GGCGCC 1 cut(s) 337
PpsI GAGTC 1 cut(s) 524
Psp6I CCWGG 3 cut(s) 4, 624, 1089
PspGI CCWGG 3 cut(s) 4, 624, 1089
PspN4I GGNNCC 3 cut(s) 335, 495, 1215
PspPI GGNCC 2 cut(s) 40, 1214
PstI CTGCAG 1 cut(s) 397
PstNI CAGNNNCTG 2 cut(s) 892, 1289
PsuI RGATCY 2 cut(s) 888, 1359
PvuII CAGCTG 2 cut(s) 398, 1268
RsaI GTAC 2 cut(s) 56, 1154
RsaNI GTAC 2 cut(s) 55, 1153
RseI CAYNNNNRTG 2 cut(s) 604, 1283
SaqAI TTAA 2 cut(s) 402, 1119
SatI GCNGC 5 cut(s) 102, 337, 393, 396, 1217
Sau3AI GATC 7 cut(s) 429, 570, 693, 704, 888, 1262, 1359
Sau96I GGNCC 2 cut(s) 40, 1214
SchI GAGTC 1 cut(s) 525
ScrFI CCNGG 3 cut(s) 6, 626, 1091
SfaNI GCATC 4 cut(s) 775, 949, 971, 1287
SfcI CTRYAG 2 cut(s) 393, 1020
SfiI GGCCNNNNNGGCC 1 cut(s) 32
SfoI GGCGCC 1 cut(s) 335
SgrAI CRCCGGYG 1 cut(s) 107
SinI GGWCC 1 cut(s) 40
SmiMI CAYNNNNRTG 2 cut(s) 604, 1283
SmlI CTYRAG 1 cut(s) 833
SmoI CTYRAG 1 cut(s) 833
Sse9I AATT 9 cut(s) 138, 226, 325, 552, 802, 904, 1121, 1352, 1531
SseBI AGGCCT 1 cut(s) 624
SsiI CCGC 3 cut(s) 337, 1172, 1217
SspDI GGCGCC 1 cut(s) 333
SspI AATATT 1 cut(s) 1161
SspMI CTAG 4 cut(s) 536, 620, 644, 731
StuI AGGCCT 1 cut(s) 624
StyD4I CCNGG 3 cut(s) 4, 624, 1089
StyI CCWWGG 4 cut(s) 36, 58, 247, 599
TaaI ACNGT 7 cut(s) 193, 655, 1030, 1231, 1285, 1390, 1540
TaqI TCGA 5 cut(s) 594, 696, 707, 908, 1145
TaqII GACCGA 1 cut(s) 57
TasI AATT 9 cut(s) 138, 226, 325, 552, 802, 904, 1121, 1352, 1531
TauI GCSGC 2 cut(s) 339, 1219
TfiI GAWTC 4 cut(s) 360, 814, 910, 1132
Tru1I TTAA 2 cut(s) 402, 1119
Tru9I TTAA 2 cut(s) 402, 1119
TscAI CASTG 8 cut(s) 565, 660, 1069, 1236, 1257, 1290, 1478, 1545
TseI GCWGC 3 cut(s) 101, 392, 395
TspDTI ATGAA 2 cut(s) 234, 862
TspRI CASTG 8 cut(s) 565, 660, 1069, 1236, 1257, 1290, 1478, 1545
VpaK11BI GGWCC 1 cut(s) 40
XapI RAATTY 5 cut(s) 138, 552, 904, 1121, 1352
XbaI TCTAGA 1 cut(s) 730
XmnI GAANNNNTTC 3 cut(s) 818, 1298, 1531
XspI CTAG 4 cut(s) 536, 620, 644, 731
Zsp2I ATGCAT 1 cut(s) 964
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.