RchiOBHm_Chr2g0097741

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
10303807 .. 10304704
898 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47259

Sequence Viewer

Length: 315 bp
ATGAGTTACTTGAAACTTGCAATTAGGGACTTGTCCTCAAGCGGATTGACAGGAGAGATAACTTCATATATATCCCATCATGACATGTTACATCTTTTAACTTGGAGAAGAACAAGCTCAAATGGTTCACTTCCGAGTATGCTTATTGAAAAATTGACAAGTGGATCATTATTGTTAAGGGCTGGAGAAAATGAAAACTTATGTGCAGCAATATCATGCAAAAGGAAGAAAGCCAATGTATTCATTCCCATAATAGCAGCAGTTGGTGGATTTGCTATTCTGTTTGCAGCTCAGTTGTTATATTATTTAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

104

Amino Acids

11.33

Weight (kDa)

9.34

Isoelectric Point (pI)

38.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0024836)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr2g0097741 RchiOBHm_Chr2g0159741
rosa_samantha Rh4CG118700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 42
AclWI GGATC 1 cut(s) 172
AflIII ACRYGT 1 cut(s) 84
AgsI TTSAA 2 cut(s) 13, 149
AluBI AGCT 2 cut(s) 117, 290
AluI AGCT 2 cut(s) 117, 290
AlwI GGATC 1 cut(s) 172
ApeKI GCWGC 3 cut(s) 206, 257, 287
BbvI GCAGC 3 cut(s) 218, 269, 299
BccI CCATC 1 cut(s) 84
BisI GCNGC 3 cut(s) 207, 258, 288
BlsI GCNGC 3 cut(s) 208, 259, 289
BpmI CTGGAG 1 cut(s) 204
BpuEI CTTGAG 1 cut(s) 22
BseMII CTCAG 1 cut(s) 305
BseXI GCAGC 3 cut(s) 218, 269, 299
BsgI GTGCAG 1 cut(s) 225
BslFI GGGAC 1 cut(s) 41
BsmFI GGGAC 1 cut(s) 41
Bsp143I GATC 1 cut(s) 164
BspACI CCGC 1 cut(s) 42
BspCNI CTCAG 1 cut(s) 304
BspHI TCATGA 1 cut(s) 79
BspPI GGATC 1 cut(s) 172
BssMI GATC 1 cut(s) 164
BstDEI CTNAG 1 cut(s) 291
BstKTI GATC 1 cut(s) 167
BstMBI GATC 1 cut(s) 164
BstNSI RCATGY 1 cut(s) 88
BstV1I GCAGC 3 cut(s) 218, 269, 299
CciI TCATGA 1 cut(s) 79
CviAII CATG 4 cut(s) 80, 85, 216, 312
CviJI RGCY 4 cut(s) 117, 182, 233, 290
CviKI_1 RGCY 4 cut(s) 117, 182, 233, 290
DdeI CTNAG 1 cut(s) 291
DpnI GATC 1 cut(s) 166
DpnII GATC 1 cut(s) 164
FaeI CATG 4 cut(s) 83, 88, 219, 315
FaqI GGGAC 1 cut(s) 41
FatI CATG 4 cut(s) 79, 84, 215, 311
Fnu4HI GCNGC 3 cut(s) 207, 258, 288
Fsp4HI GCNGC 3 cut(s) 207, 258, 288
GluI GCNGC 3 cut(s) 207, 258, 288
GsuI CTGGAG 1 cut(s) 204
Hin1II CATG 4 cut(s) 83, 88, 219, 315
Hpy166II GTNNAC 1 cut(s) 128
Hpy188I TCNGA 1 cut(s) 135
Hpy188III TCNNGA 1 cut(s) 80
Hpy8I GTNNAC 1 cut(s) 128
HpyCH4V TGCA 4 cut(s) 20, 206, 219, 287
HpyF3I CTNAG 1 cut(s) 291
Hsp92II CATG 4 cut(s) 83, 88, 219, 315
Kzo9I GATC 1 cut(s) 164
LpnPI CCDG 2 cut(s) 36, 168
Lsp1109I GCAGC 3 cut(s) 218, 269, 299
MaeIII GTNAC 2 cut(s) 5, 87
MalI GATC 1 cut(s) 166
MboI GATC 1 cut(s) 164
MboII GAAGA 2 cut(s) 120, 238
MluCI AATT 2 cut(s) 21, 152
MnlI CCTC 1 cut(s) 46
MseI TTAA 2 cut(s) 98, 176
NdeII GATC 1 cut(s) 164
NlaIII CATG 4 cut(s) 83, 88, 219, 315
NspI RCATGY 1 cut(s) 88
PagI TCATGA 1 cut(s) 79
PciI ACATGT 1 cut(s) 84
PkrI GCNGC 3 cut(s) 208, 259, 289
PscI ACATGT 1 cut(s) 84
SaqAI TTAA 2 cut(s) 98, 176
SatI GCNGC 3 cut(s) 207, 258, 288
Sau3AI GATC 1 cut(s) 164
SetI ASST 2 cut(s) 119, 292
SmlI CTYRAG 1 cut(s) 37
SmoI CTYRAG 1 cut(s) 37
Sse9I AATT 2 cut(s) 21, 152
SsiI CCGC 1 cut(s) 42
TasI AATT 2 cut(s) 21, 152
Tru1I TTAA 2 cut(s) 98, 176
Tru9I TTAA 2 cut(s) 98, 176
TseI GCWGC 3 cut(s) 206, 257, 287
TspDTI ATGAA 3 cut(s) 54, 207, 232
XceI RCATGY 1 cut(s) 88
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.