HECT-like Ubiquitin-conjugating enzyme (E2)-binding
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0102391 |
| rosa_samantha | Rh2CG161000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 89 |
| AcoI | YGGCCR | 1 cut(s) | 233 |
| AcsI | RAATTY | 1 cut(s) | 205 |
| AfaI | GTAC | 1 cut(s) | 260 |
| AgsI | TTSAA | 1 cut(s) | 17 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 77, 109 |
| AluBI | AGCT | 1 cut(s) | 118 |
| AluI | AGCT | 1 cut(s) | 118 |
| AoxI | GGCC | 1 cut(s) | 233 |
| ApeKI | GCWGC | 1 cut(s) | 176 |
| ApoI | RAATTY | 1 cut(s) | 205 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 197, 229 |
| BalI | TGGCCA | 1 cut(s) | 235 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 73, 105 |
| BbvI | GCAGC | 1 cut(s) | 163 |
| BceAI | ACGGC | 1 cut(s) | 140 |
| BglII | AGATCT | 1 cut(s) | 165 |
| BisI | GCNGC | 1 cut(s) | 177 |
| BlsI | GCNGC | 1 cut(s) | 178 |
| BmiI | GGNNCC | 1 cut(s) | 30 |
| BmrI | ACTGGG | 1 cut(s) | 250 |
| BmuI | ACTGGG | 1 cut(s) | 250 |
| BsaJI | CCNNGG | 2 cut(s) | 23, 93 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 89, 119 |
| Bse1I | ACTGG | 3 cut(s) | 65, 245, 256 |
| BseDI | CCNNGG | 2 cut(s) | 23, 93 |
| BseMII | CTCAG | 1 cut(s) | 176 |
| BseNI | ACTGG | 3 cut(s) | 65, 245, 256 |
| BseXI | GCAGC | 1 cut(s) | 163 |
| BshFI | GGCC | 1 cut(s) | 235 |
| BsnI | GGCC | 1 cut(s) | 235 |
| Bsp143I | GATC | 2 cut(s) | 136, 165 |
| BspANI | GGCC | 1 cut(s) | 235 |
| BspCNI | CTCAG | 1 cut(s) | 175 |
| BspLI | GGNNCC | 1 cut(s) | 30 |
| BsrI | ACTGG | 3 cut(s) | 65, 245, 256 |
| BssECI | CCNNGG | 2 cut(s) | 23, 93 |
| BssMI | GATC | 2 cut(s) | 136, 165 |
| BssNAI | GTATAC | 1 cut(s) | 90 |
| BssT1I | CCWWGG | 2 cut(s) | 23, 93 |
| Bst1107I | GTATAC | 1 cut(s) | 90 |
| BstDEI | CTNAG | 1 cut(s) | 162 |
| BstKTI | GATC | 2 cut(s) | 139, 168 |
| BstMBI | GATC | 2 cut(s) | 136, 165 |
| BstV1I | GCAGC | 1 cut(s) | 163 |
| BstX2I | RGATCY | 1 cut(s) | 165 |
| BstYI | RGATCY | 1 cut(s) | 165 |
| BstZ17I | GTATAC | 1 cut(s) | 90 |
| BsuRI | GGCC | 1 cut(s) | 235 |
| BtsI | GCAGTG | 2 cut(s) | 72, 226 |
| BtsIMutI | CAGTG | 4 cut(s) | 58, 72, 226, 238 |
| Csp6I | GTAC | 1 cut(s) | 259 |
| CviAII | CATG | 2 cut(s) | 191, 227 |
| CviJI | RGCY | 3 cut(s) | 118, 155, 235 |
| CviKI_1 | RGCY | 3 cut(s) | 118, 155, 235 |
| CviQI | GTAC | 1 cut(s) | 259 |
| DdeI | CTNAG | 1 cut(s) | 162 |
| DpnI | GATC | 2 cut(s) | 138, 167 |
| DpnII | GATC | 2 cut(s) | 136, 165 |
| EaeI | YGGCCR | 1 cut(s) | 233 |
| Eco130I | CCWWGG | 2 cut(s) | 23, 93 |
| EcoT14I | CCWWGG | 2 cut(s) | 23, 93 |
| ErhI | CCWWGG | 2 cut(s) | 23, 93 |
| FaeI | CATG | 2 cut(s) | 194, 230 |
| FaiI | YATR | 8 cut(s) | 35, 37, 39, 41, 90, 192, 197, 228 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 77, 109 |
| FatI | CATG | 2 cut(s) | 190, 226 |
| FblI | GTMKAC | 1 cut(s) | 89 |
| Fnu4HI | GCNGC | 1 cut(s) | 177 |
| Fsp4HI | GCNGC | 1 cut(s) | 177 |
| GluI | GCNGC | 1 cut(s) | 177 |
| HaeIII | GGCC | 1 cut(s) | 235 |
| Hin1II | CATG | 2 cut(s) | 194, 230 |
| HinfI | GANTC | 1 cut(s) | 160 |
| Hpy166II | GTNNAC | 1 cut(s) | 90 |
| Hpy188I | TCNGA | 2 cut(s) | 51, 165 |
| Hpy8I | GTNNAC | 1 cut(s) | 90 |
| HpyAV | CCTTC | 1 cut(s) | 75 |
| HpyCH4V | TGCA | 4 cut(s) | 77, 110, 131, 179 |
| HpyF3I | CTNAG | 1 cut(s) | 162 |
| Hsp92II | CATG | 2 cut(s) | 194, 230 |
| Kzo9I | GATC | 2 cut(s) | 136, 165 |
| LpnPI | CCDG | 4 cut(s) | 46, 128, 201, 226 |
| Lsp1109I | GCAGC | 1 cut(s) | 163 |
| MaeIII | GTNAC | 1 cut(s) | 157 |
| MalI | GATC | 2 cut(s) | 138, 167 |
| MboI | GATC | 2 cut(s) | 136, 165 |
| MflI | RGATCY | 1 cut(s) | 165 |
| MlsI | TGGCCA | 1 cut(s) | 235 |
| MluCI | AATT | 3 cut(s) | 140, 181, 205 |
| MluNI | TGGCCA | 1 cut(s) | 235 |
| MlyI | GAGTC | 1 cut(s) | 154 |
| Mox20I | TGGCCA | 1 cut(s) | 235 |
| MscI | TGGCCA | 1 cut(s) | 235 |
| Msp20I | TGGCCA | 1 cut(s) | 235 |
| NdeII | GATC | 2 cut(s) | 136, 165 |
| NlaIII | CATG | 2 cut(s) | 194, 230 |
| NlaIV | GGNNCC | 1 cut(s) | 30 |
| NmuCI | GTSAC | 1 cut(s) | 157 |
| PkrI | GCNGC | 1 cut(s) | 178 |
| PleI | GAGTC | 1 cut(s) | 154 |
| PpsI | GAGTC | 1 cut(s) | 154 |
| PspN4I | GGNNCC | 1 cut(s) | 30 |
| PsuI | RGATCY | 1 cut(s) | 165 |
| RsaI | GTAC | 1 cut(s) | 260 |
| RsaNI | GTAC | 1 cut(s) | 259 |
| SatI | GCNGC | 1 cut(s) | 177 |
| Sau3AI | GATC | 2 cut(s) | 136, 165 |
| SchI | GAGTC | 1 cut(s) | 154 |
| SetI | ASST | 2 cut(s) | 95, 120 |
| Sse9I | AATT | 3 cut(s) | 140, 181, 205 |
| StyI | CCWWGG | 2 cut(s) | 23, 93 |
| TaqI | TCGA | 1 cut(s) | 123 |
| TasI | AATT | 3 cut(s) | 140, 181, 205 |
| TscAI | CASTG | 4 cut(s) | 65, 79, 226, 245 |
| TseFI | GTSAC | 1 cut(s) | 157 |
| TseI | GCWGC | 1 cut(s) | 176 |
| Tsp45I | GTSAC | 1 cut(s) | 157 |
| TspRI | CASTG | 4 cut(s) | 65, 79, 226, 245 |
| XapI | RAATTY | 1 cut(s) | 205 |
| XmiI | GTMKAC | 1 cut(s) | 89 |