HECT-like Ubiquitin-conjugating enzyme (E2)-binding
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0102391 |
| rosa_samantha | Rh2CG161000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 409 |
| AccI | GTMKAC | 1 cut(s) | 209 |
| AcsI | RAATTY | 2 cut(s) | 325, 445 |
| AfaI | GTAC | 2 cut(s) | 13, 490 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 88 |
| AgsI | TTSAA | 4 cut(s) | 127, 388, 425, 512 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 197, 229, 391, 423 |
| AluBI | AGCT | 2 cut(s) | 238, 474 |
| AluI | AGCT | 2 cut(s) | 238, 474 |
| Alw26I | GTCTC | 2 cut(s) | 165, 349 |
| ApeKI | GCWGC | 1 cut(s) | 296 |
| ApoI | RAATTY | 2 cut(s) | 325, 445 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 317, 349 |
| AseI | ATTAAT | 1 cut(s) | 456 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 193, 225 |
| BauI | CACGAG | 1 cut(s) | 102 |
| BbvI | GCAGC | 1 cut(s) | 283 |
| BccI | CCATC | 1 cut(s) | 388 |
| BceAI | ACGGC | 1 cut(s) | 260 |
| BcoDI | GTCTC | 2 cut(s) | 165, 349 |
| BfaI | CTAG | 1 cut(s) | 137 |
| BfuAI | ACCTGC | 1 cut(s) | 409 |
| BglII | AGATCT | 1 cut(s) | 285 |
| BisI | GCNGC | 1 cut(s) | 297 |
| BlsI | GCNGC | 1 cut(s) | 298 |
| BpuEI | CTTGAG | 1 cut(s) | 47 |
| BsaJI | CCNNGG | 1 cut(s) | 213 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 209, 239 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 88 |
| Bse1I | ACTGG | 2 cut(s) | 93, 185 |
| BseDI | CCNNGG | 1 cut(s) | 213 |
| BseGI | GGATG | 2 cut(s) | 380, 469 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 88 |
| BseMII | CTCAG | 3 cut(s) | 86, 176, 296 |
| BseNI | ACTGG | 2 cut(s) | 93, 185 |
| BseXI | GCAGC | 1 cut(s) | 283 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 88 |
| BsmAI | GTCTC | 2 cut(s) | 165, 349 |
| Bsp1407I | TGTACA | 1 cut(s) | 488 |
| Bsp143I | GATC | 4 cut(s) | 98, 108, 256, 285 |
| BspCNI | CTCAG | 3 cut(s) | 87, 175, 295 |
| BspMI | ACCTGC | 1 cut(s) | 409 |
| BsrGI | TGTACA | 1 cut(s) | 488 |
| BsrI | ACTGG | 2 cut(s) | 93, 185 |
| BssECI | CCNNGG | 1 cut(s) | 213 |
| BssMI | GATC | 4 cut(s) | 98, 108, 256, 285 |
| BssNAI | GTATAC | 1 cut(s) | 210 |
| BssSI | CACGAG | 1 cut(s) | 102 |
| BssT1I | CCWWGG | 1 cut(s) | 213 |
| Bst1107I | GTATAC | 1 cut(s) | 210 |
| Bst2BI | CACGAG | 1 cut(s) | 102 |
| Bst4CI | ACNGT | 2 cut(s) | 35, 488 |
| BstAUI | TGTACA | 1 cut(s) | 488 |
| BstC8I | GCNNGC | 1 cut(s) | 76 |
| BstDEI | CTNAG | 4 cut(s) | 95, 162, 282, 351 |
| BstF5I | GGATG | 2 cut(s) | 380, 469 |
| BstKTI | GATC | 4 cut(s) | 101, 111, 259, 288 |
| BstMAI | GTCTC | 2 cut(s) | 165, 349 |
| BstMBI | GATC | 4 cut(s) | 98, 108, 256, 285 |
| BstNSI | RCATGY | 2 cut(s) | 442, 495 |
| BstV1I | GCAGC | 1 cut(s) | 283 |
| BstX2I | RGATCY | 1 cut(s) | 285 |
| BstYI | RGATCY | 1 cut(s) | 285 |
| BstZ17I | GTATAC | 1 cut(s) | 210 |
| BtsCI | GGATG | 2 cut(s) | 380, 469 |
| BtsI | GCAGTG | 2 cut(s) | 192, 346 |
| BtsIMutI | CAGTG | 3 cut(s) | 178, 192, 346 |
| BveI | ACCTGC | 1 cut(s) | 409 |
| Cac8I | GCNNGC | 1 cut(s) | 76 |
| Csp6I | GTAC | 2 cut(s) | 12, 489 |
| CviAII | CATG | 3 cut(s) | 311, 439, 492 |
| CviJI | RGCY | 4 cut(s) | 44, 238, 275, 474 |
| CviKI_1 | RGCY | 4 cut(s) | 44, 238, 275, 474 |
| CviQI | GTAC | 2 cut(s) | 12, 489 |
| DdeI | CTNAG | 4 cut(s) | 95, 162, 282, 351 |
| DpnI | GATC | 4 cut(s) | 100, 110, 258, 287 |
| DpnII | GATC | 4 cut(s) | 98, 108, 256, 285 |
| Eco130I | CCWWGG | 1 cut(s) | 213 |
| EcoT14I | CCWWGG | 1 cut(s) | 213 |
| ErhI | CCWWGG | 1 cut(s) | 213 |
| FaeI | CATG | 3 cut(s) | 314, 442, 495 |
| FaiI | YATR | 8 cut(s) | 133, 210, 312, 317, 440, 484, 493, 499 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 197, 229 |
| FatI | CATG | 3 cut(s) | 310, 438, 491 |
| FblI | GTMKAC | 1 cut(s) | 209 |
| Fnu4HI | GCNGC | 1 cut(s) | 297 |
| FokI | GGATG | 2 cut(s) | 367, 476 |
| Fsp4HI | GCNGC | 1 cut(s) | 297 |
| FspBI | CTAG | 1 cut(s) | 137 |
| GluI | GCNGC | 1 cut(s) | 297 |
| Hin1II | CATG | 3 cut(s) | 314, 442, 495 |
| HinfI | GANTC | 2 cut(s) | 19, 280 |
| Hpy166II | GTNNAC | 1 cut(s) | 210 |
| Hpy188I | TCNGA | 3 cut(s) | 96, 171, 285 |
| Hpy188III | TCNNGA | 1 cut(s) | 102 |
| Hpy8I | GTNNAC | 1 cut(s) | 210 |
| HpyAV | CCTTC | 2 cut(s) | 133, 195 |
| HpyCH4III | ACNGT | 2 cut(s) | 35, 488 |
| HpyCH4V | TGCA | 6 cut(s) | 78, 197, 230, 251, 299, 418 |
| HpyF3I | CTNAG | 4 cut(s) | 95, 162, 282, 351 |
| Hsp92II | CATG | 3 cut(s) | 314, 442, 495 |
| Kzo9I | GATC | 4 cut(s) | 98, 108, 256, 285 |
| LmnI | GCTCC | 1 cut(s) | 4 |
| LpnPI | CCDG | 5 cut(s) | 74, 166, 248, 321, 404 |
| Lsp1109I | GCAGC | 1 cut(s) | 283 |
| MaeI | CTAG | 1 cut(s) | 137 |
| MaeIII | GTNAC | 1 cut(s) | 277 |
| MalI | GATC | 4 cut(s) | 100, 110, 258, 287 |
| MboI | GATC | 4 cut(s) | 98, 108, 256, 285 |
| MboII | GAAGA | 1 cut(s) | 400 |
| MfeI | CAATTG | 3 cut(s) | 68, 406, 425 |
| MflI | RGATCY | 1 cut(s) | 285 |
| MlyI | GAGTC | 2 cut(s) | 13, 274 |
| MnlI | CCTC | 1 cut(s) | 363 |
| MseI | TTAA | 1 cut(s) | 456 |
| MunI | CAATTG | 3 cut(s) | 68, 406, 425 |
| NdeII | GATC | 4 cut(s) | 98, 108, 256, 285 |
| NlaIII | CATG | 3 cut(s) | 314, 442, 495 |
| NmuCI | GTSAC | 1 cut(s) | 277 |
| NspI | RCATGY | 2 cut(s) | 442, 495 |
| PkrI | GCNGC | 1 cut(s) | 298 |
| PleI | GAGTC | 2 cut(s) | 13, 274 |
| PpsI | GAGTC | 2 cut(s) | 13, 274 |
| PshBI | ATTAAT | 1 cut(s) | 456 |
| PsuI | RGATCY | 1 cut(s) | 285 |
| RsaI | GTAC | 2 cut(s) | 13, 490 |
| RsaNI | GTAC | 2 cut(s) | 12, 489 |
| SaqAI | TTAA | 1 cut(s) | 456 |
| SatI | GCNGC | 1 cut(s) | 297 |
| Sau3AI | GATC | 4 cut(s) | 98, 108, 256, 285 |
| SchI | GAGTC | 2 cut(s) | 13, 274 |
| SetI | ASST | 6 cut(s) | 125, 215, 240, 357, 423, 476 |
| SmlI | CTYRAG | 1 cut(s) | 62 |
| SmoI | CTYRAG | 1 cut(s) | 62 |
| SspMI | CTAG | 1 cut(s) | 137 |
| StyI | CCWWGG | 1 cut(s) | 213 |
| TaaI | ACNGT | 2 cut(s) | 35, 488 |
| TaqI | TCGA | 1 cut(s) | 243 |
| TatI | WGTACW | 1 cut(s) | 488 |
| Tru1I | TTAA | 1 cut(s) | 456 |
| Tru9I | TTAA | 1 cut(s) | 456 |
| TscAI | CASTG | 3 cut(s) | 185, 199, 346 |
| TseFI | GTSAC | 1 cut(s) | 277 |
| TseI | GCWGC | 1 cut(s) | 296 |
| Tsp45I | GTSAC | 1 cut(s) | 277 |
| TspDTI | ATGAA | 2 cut(s) | 36, 351 |
| TspRI | CASTG | 3 cut(s) | 185, 199, 346 |
| VspI | ATTAAT | 1 cut(s) | 456 |
| XapI | RAATTY | 2 cut(s) | 325, 445 |
| XceI | RCATGY | 2 cut(s) | 442, 495 |
| XmiI | GTMKAC | 1 cut(s) | 209 |
| XspI | CTAG | 1 cut(s) | 137 |