Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1164200.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0104111 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 98 |
| AcyI | GRCGYC | 1 cut(s) | 240 |
| AfaI | GTAC | 1 cut(s) | 215 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 318 |
| AgsI | TTSAA | 1 cut(s) | 50 |
| AluBI | AGCT | 1 cut(s) | 335 |
| AluI | AGCT | 1 cut(s) | 335 |
| Alw21I | GWGCWC | 1 cut(s) | 127 |
| Alw26I | GTCTC | 1 cut(s) | 169 |
| AoxI | GGCC | 1 cut(s) | 135 |
| AseI | ATTAAT | 1 cut(s) | 207 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 45 |
| AspS9I | GGNCC | 1 cut(s) | 145 |
| AsuC2I | CCSGG | 1 cut(s) | 180 |
| AsuHPI | GGTGA | 1 cut(s) | 341 |
| AvaII | GGWCC | 1 cut(s) | 145 |
| BanII | GRGCYC | 1 cut(s) | 15 |
| BbsI | GAAGAC | 1 cut(s) | 104 |
| Bbv12I | GWGCWC | 1 cut(s) | 127 |
| BclI | TGATCA | 1 cut(s) | 130 |
| BcnI | CCSGG | 1 cut(s) | 180 |
| BcoDI | GTCTC | 1 cut(s) | 169 |
| BfaI | CTAG | 1 cut(s) | 336 |
| Bme1390I | CCNGG | 1 cut(s) | 180 |
| Bme18I | GGWCC | 1 cut(s) | 145 |
| BmgT120I | GGNCC | 1 cut(s) | 145 |
| BmrFI | CCNGG | 1 cut(s) | 180 |
| BpiI | GAAGAC | 1 cut(s) | 104 |
| BpuMI | CCSGG | 1 cut(s) | 180 |
| BsaHI | GRCGYC | 1 cut(s) | 240 |
| BsaJI | CCNNGG | 1 cut(s) | 179 |
| BsaWI | WCCGGW | 1 cut(s) | 167 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 318 |
| BseDI | CCNNGG | 1 cut(s) | 179 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 318 |
| BseMII | CTCAG | 2 cut(s) | 70, 258 |
| BshFI | GGCC | 1 cut(s) | 137 |
| BsiHKAI | GWGCWC | 1 cut(s) | 127 |
| BsiSI | CCGG | 2 cut(s) | 168, 179 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 318 |
| BsmAI | GTCTC | 1 cut(s) | 169 |
| BsnI | GGCC | 1 cut(s) | 137 |
| Bsp1286I | GDGCHC | 2 cut(s) | 15, 127 |
| Bsp143I | GATC | 2 cut(s) | 130, 324 |
| BspANI | GGCC | 1 cut(s) | 137 |
| BspCNI | CTCAG | 2 cut(s) | 69, 259 |
| BssECI | CCNNGG | 1 cut(s) | 179 |
| BssMI | GATC | 2 cut(s) | 130, 324 |
| BssNI | GRCGYC | 1 cut(s) | 240 |
| Bst4CI | ACNGT | 4 cut(s) | 122, 200, 250, 345 |
| BstACI | GRCGYC | 1 cut(s) | 240 |
| BstDEI | CTNAG | 2 cut(s) | 56, 267 |
| BstKTI | GATC | 2 cut(s) | 133, 327 |
| BstMAI | GTCTC | 1 cut(s) | 169 |
| BstMBI | GATC | 2 cut(s) | 130, 324 |
| BstSCI | CCNGG | 1 cut(s) | 178 |
| BstV2I | GAAGAC | 1 cut(s) | 104 |
| BsuRI | GGCC | 1 cut(s) | 137 |
| Cfr13I | GGNCC | 1 cut(s) | 145 |
| CseI | GACGC | 1 cut(s) | 248 |
| Csp6I | GTAC | 1 cut(s) | 214 |
| CviJI | RGCY | 7 cut(s) | 13, 38, 60, 137, 178, 184, 335 |
| CviKI_1 | RGCY | 7 cut(s) | 13, 38, 60, 137, 178, 184, 335 |
| CviQI | GTAC | 1 cut(s) | 214 |
| DdeI | CTNAG | 2 cut(s) | 56, 267 |
| DpnI | GATC | 2 cut(s) | 132, 326 |
| DpnII | GATC | 2 cut(s) | 130, 324 |
| Eco24I | GRGCYC | 1 cut(s) | 15 |
| Eco47I | GGWCC | 1 cut(s) | 145 |
| Eco57I | CTGAAG | 1 cut(s) | 98 |
| EcoT38I | GRGCYC | 1 cut(s) | 15 |
| FaiI | YATR | 5 cut(s) | 9, 28, 88, 296, 309 |
| FbaI | TGATCA | 1 cut(s) | 130 |
| FriOI | GRGCYC | 1 cut(s) | 15 |
| FspBI | CTAG | 1 cut(s) | 336 |
| HaeIII | GGCC | 1 cut(s) | 137 |
| HapII | CCGG | 2 cut(s) | 168, 179 |
| HgaI | GACGC | 1 cut(s) | 248 |
| Hin1I | GRCGYC | 1 cut(s) | 240 |
| HinfI | GANTC | 1 cut(s) | 162 |
| HpaII | CCGG | 2 cut(s) | 168, 179 |
| HphI | GGTGA | 1 cut(s) | 341 |
| Hpy188III | TCNNGA | 2 cut(s) | 128, 378 |
| HpyCH4III | ACNGT | 4 cut(s) | 122, 200, 250, 345 |
| HpyF3I | CTNAG | 2 cut(s) | 56, 267 |
| Hsp92I | GRCGYC | 1 cut(s) | 240 |
| Ksp22I | TGATCA | 1 cut(s) | 130 |
| Kzo9I | GATC | 2 cut(s) | 130, 324 |
| LpnPI | CCDG | 6 cut(s) | 119, 181, 192, 257, 279, 288 |
| MaeI | CTAG | 1 cut(s) | 336 |
| MaeIII | GTNAC | 1 cut(s) | 194 |
| MalI | GATC | 2 cut(s) | 132, 326 |
| MboI | GATC | 2 cut(s) | 130, 324 |
| MboII | GAAGA | 3 cut(s) | 44, 104, 334 |
| MhlI | GDGCHC | 2 cut(s) | 15, 127 |
| MluCI | AATT | 4 cut(s) | 50, 140, 208, 370 |
| MlyI | GAGTC | 1 cut(s) | 171 |
| MnlI | CCTC | 5 cut(s) | 85, 107, 250, 264, 369 |
| MroXI | GAANNNNTTC | 1 cut(s) | 45 |
| MseI | TTAA | 2 cut(s) | 23, 207 |
| MspI | CCGG | 2 cut(s) | 168, 179 |
| MspR9I | CCNGG | 1 cut(s) | 180 |
| NciI | CCSGG | 1 cut(s) | 180 |
| NdeII | GATC | 2 cut(s) | 130, 324 |
| PdmI | GAANNNNTTC | 1 cut(s) | 45 |
| PleI | GAGTC | 1 cut(s) | 170 |
| PpsI | GAGTC | 1 cut(s) | 170 |
| PshBI | ATTAAT | 1 cut(s) | 207 |
| PspPI | GGNCC | 1 cut(s) | 145 |
| RsaI | GTAC | 1 cut(s) | 215 |
| RsaNI | GTAC | 1 cut(s) | 214 |
| SaqAI | TTAA | 2 cut(s) | 23, 207 |
| Sau3AI | GATC | 2 cut(s) | 130, 324 |
| Sau96I | GGNCC | 1 cut(s) | 145 |
| SchI | GAGTC | 1 cut(s) | 171 |
| ScrFI | CCNGG | 1 cut(s) | 180 |
| SduI | GDGCHC | 2 cut(s) | 15, 127 |
| SetI | ASST | 1 cut(s) | 337 |
| SinI | GGWCC | 1 cut(s) | 145 |
| Sse9I | AATT | 4 cut(s) | 50, 140, 208, 370 |
| SspMI | CTAG | 1 cut(s) | 336 |
| StyD4I | CCNGG | 1 cut(s) | 178 |
| TaaI | ACNGT | 4 cut(s) | 122, 200, 250, 345 |
| TaqI | TCGA | 2 cut(s) | 92, 174 |
| TasI | AATT | 4 cut(s) | 50, 140, 208, 370 |
| Tru1I | TTAA | 2 cut(s) | 23, 207 |
| Tru9I | TTAA | 2 cut(s) | 23, 207 |
| TspDTI | ATGAA | 2 cut(s) | 193, 366 |
| VpaK11BI | GGWCC | 1 cut(s) | 145 |
| VspI | ATTAAT | 1 cut(s) | 207 |
| XmnI | GAANNNNTTC | 1 cut(s) | 45 |
| XspI | CTAG | 1 cut(s) | 336 |