Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0145301 |
| rosa_rugosa | Rorug02G0632100 Rorug04G0193800 |
| rosa_samantha | Rh4AG026800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 15 |
| AcsI | RAATTY | 1 cut(s) | 91 |
| AgsI | TTSAA | 2 cut(s) | 61, 215 |
| AluBI | AGCT | 2 cut(s) | 106, 146 |
| AluI | AGCT | 2 cut(s) | 106, 146 |
| Alw26I | GTCTC | 1 cut(s) | 138 |
| AoxI | GGCC | 1 cut(s) | 50 |
| ApeKI | GCWGC | 1 cut(s) | 143 |
| ApoI | RAATTY | 1 cut(s) | 91 |
| AspS9I | GGNCC | 1 cut(s) | 68 |
| AsuC2I | CCSGG | 1 cut(s) | 156 |
| AsuHPI | GGTGA | 2 cut(s) | 193, 199 |
| AvaII | GGWCC | 1 cut(s) | 68 |
| AxyI | CCTNAGG | 1 cut(s) | 47 |
| BbsI | GAAGAC | 1 cut(s) | 15 |
| BbvI | GCAGC | 1 cut(s) | 155 |
| BccI | CCATC | 1 cut(s) | 178 |
| BcnI | CCSGG | 1 cut(s) | 156 |
| BcoDI | GTCTC | 1 cut(s) | 138 |
| BfuAI | ACCTGC | 1 cut(s) | 15 |
| BisI | GCNGC | 1 cut(s) | 144 |
| BlsI | GCNGC | 1 cut(s) | 145 |
| Bme1390I | CCNGG | 1 cut(s) | 156 |
| Bme18I | GGWCC | 1 cut(s) | 68 |
| BmgT120I | GGNCC | 1 cut(s) | 68 |
| BmrFI | CCNGG | 1 cut(s) | 156 |
| BpiI | GAAGAC | 1 cut(s) | 15 |
| BpuMI | CCSGG | 1 cut(s) | 156 |
| BsaI | GGTCTC | 1 cut(s) | 138 |
| BsaWI | WCCGGW | 1 cut(s) | 12 |
| Bse21I | CCTNAGG | 1 cut(s) | 47 |
| BseGI | GGATG | 1 cut(s) | 42 |
| BseMII | CTCAG | 2 cut(s) | 38, 149 |
| BseXI | GCAGC | 1 cut(s) | 155 |
| BshFI | GGCC | 1 cut(s) | 52 |
| BsiSI | CCGG | 2 cut(s) | 13, 156 |
| BsmAI | GTCTC | 1 cut(s) | 138 |
| BsnI | GGCC | 1 cut(s) | 52 |
| Bso31I | GGTCTC | 1 cut(s) | 138 |
| BspANI | GGCC | 1 cut(s) | 52 |
| BspCNI | CTCAG | 2 cut(s) | 39, 148 |
| BspMI | ACCTGC | 1 cut(s) | 15 |
| BspTNI | GGTCTC | 1 cut(s) | 138 |
| Bst6I | CTCTTC | 3 cut(s) | 11, 56, 81 |
| BstDEI | CTNAG | 2 cut(s) | 47, 135 |
| BstF5I | GGATG | 1 cut(s) | 42 |
| BstMAI | GTCTC | 1 cut(s) | 138 |
| BstSCI | CCNGG | 1 cut(s) | 154 |
| BstV1I | GCAGC | 1 cut(s) | 155 |
| BstV2I | GAAGAC | 1 cut(s) | 15 |
| Bsu36I | CCTNAGG | 1 cut(s) | 47 |
| BsuRI | GGCC | 1 cut(s) | 52 |
| BtsCI | GGATG | 1 cut(s) | 42 |
| BveI | ACCTGC | 1 cut(s) | 15 |
| Cfr13I | GGNCC | 1 cut(s) | 68 |
| CviAII | CATG | 1 cut(s) | 110 |
| CviJI | RGCY | 3 cut(s) | 52, 106, 146 |
| CviKI_1 | RGCY | 3 cut(s) | 52, 106, 146 |
| DdeI | CTNAG | 2 cut(s) | 47, 135 |
| Eam1104I | CTCTTC | 3 cut(s) | 11, 56, 81 |
| EarI | CTCTTC | 3 cut(s) | 11, 56, 81 |
| Eco147I | AGGCCT | 1 cut(s) | 52 |
| Eco31I | GGTCTC | 1 cut(s) | 138 |
| Eco47I | GGWCC | 1 cut(s) | 68 |
| Eco81I | CCTNAGG | 1 cut(s) | 47 |
| FaeI | CATG | 1 cut(s) | 113 |
| FaiI | YATR | 1 cut(s) | 111 |
| FatI | CATG | 1 cut(s) | 109 |
| Fnu4HI | GCNGC | 1 cut(s) | 144 |
| FokI | GGATG | 1 cut(s) | 49 |
| Fsp4HI | GCNGC | 1 cut(s) | 144 |
| GluI | GCNGC | 1 cut(s) | 144 |
| HaeIII | GGCC | 1 cut(s) | 52 |
| HapII | CCGG | 2 cut(s) | 13, 156 |
| Hin1II | CATG | 1 cut(s) | 113 |
| HpaII | CCGG | 2 cut(s) | 13, 156 |
| HphI | GGTGA | 2 cut(s) | 193, 199 |
| Hpy188I | TCNGA | 1 cut(s) | 138 |
| HpyAV | CCTTC | 1 cut(s) | 153 |
| HpyCH4V | TGCA | 3 cut(s) | 24, 113, 143 |
| HpyF3I | CTNAG | 2 cut(s) | 47, 135 |
| Hsp92II | CATG | 1 cut(s) | 113 |
| LpnPI | CCDG | 6 cut(s) | 10, 26, 59, 68, 104, 169 |
| Lsp1109I | GCAGC | 1 cut(s) | 155 |
| MboII | GAAGA | 4 cut(s) | 20, 28, 73, 98 |
| MluCI | AATT | 3 cut(s) | 91, 149, 208 |
| MnlI | CCTC | 4 cut(s) | 24, 42, 59, 166 |
| MspI | CCGG | 2 cut(s) | 13, 156 |
| MspR9I | CCNGG | 1 cut(s) | 156 |
| NciI | CCSGG | 1 cut(s) | 156 |
| NlaIII | CATG | 1 cut(s) | 113 |
| PceI | AGGCCT | 1 cut(s) | 52 |
| PkrI | GCNGC | 1 cut(s) | 145 |
| PspPI | GGNCC | 1 cut(s) | 68 |
| SatI | GCNGC | 1 cut(s) | 144 |
| Sau96I | GGNCC | 1 cut(s) | 68 |
| ScrFI | CCNGG | 1 cut(s) | 156 |
| SetI | ASST | 7 cut(s) | 29, 35, 48, 70, 108, 148, 177 |
| SgeI | CNNG | 9 cut(s) | 25, 37, 58, 95, 122, 131, 139, 167, 168 |
| SinI | GGWCC | 1 cut(s) | 68 |
| Sse9I | AATT | 3 cut(s) | 91, 149, 208 |
| SseBI | AGGCCT | 1 cut(s) | 52 |
| StuI | AGGCCT | 1 cut(s) | 52 |
| StyD4I | CCNGG | 1 cut(s) | 154 |
| TasI | AATT | 3 cut(s) | 91, 149, 208 |
| TseI | GCWGC | 1 cut(s) | 143 |
| TspDTI | ATGAA | 2 cut(s) | 53, 98 |
| VpaK11BI | GGWCC | 1 cut(s) | 68 |
| XapI | RAATTY | 1 cut(s) | 91 |