Chaperone protein DNAj
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1298800.v1.1 |
| rosa_chinensis | RchiOBHm_Chr3g0475551 |
| rosa_rugosa | Rorug01G0401500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 44 |
| AcuI | CTGAAG | 1 cut(s) | 176 |
| AfaI | GTAC | 1 cut(s) | 209 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 100, 101 |
| AgsI | TTSAA | 1 cut(s) | 58 |
| AluBI | AGCT | 1 cut(s) | 157 |
| AluI | AGCT | 1 cut(s) | 157 |
| Alw26I | GTCTC | 1 cut(s) | 204 |
| AseI | ATTAAT | 1 cut(s) | 182 |
| BcoDI | GTCTC | 1 cut(s) | 204 |
| BfaI | CTAG | 1 cut(s) | 117 |
| BmsI | GCATC | 1 cut(s) | 90 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 204, 234 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 100, 101 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 100, 101 |
| BseMII | CTCAG | 1 cut(s) | 217 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 100, 101 |
| BsmAI | GTCTC | 1 cut(s) | 204 |
| BspACI | CCGC | 1 cut(s) | 44 |
| BspCNI | CTCAG | 1 cut(s) | 216 |
| Bst4CI | ACNGT | 1 cut(s) | 54 |
| Bst6I | CTCTTC | 1 cut(s) | 167 |
| BstDEI | CTNAG | 1 cut(s) | 203 |
| BstMAI | GTCTC | 1 cut(s) | 204 |
| Csp6I | GTAC | 1 cut(s) | 208 |
| CviJI | RGCY | 1 cut(s) | 157 |
| CviKI_1 | RGCY | 1 cut(s) | 157 |
| CviQI | GTAC | 1 cut(s) | 208 |
| DdeI | CTNAG | 1 cut(s) | 203 |
| Eam1104I | CTCTTC | 1 cut(s) | 167 |
| EarI | CTCTTC | 1 cut(s) | 167 |
| Eco57I | CTGAAG | 1 cut(s) | 176 |
| FaiI | YATR | 9 cut(s) | 8, 29, 76, 78, 144, 179, 216, 248, 259 |
| FspBI | CTAG | 1 cut(s) | 117 |
| Hpy188I | TCNGA | 1 cut(s) | 91 |
| Hpy188III | TCNNGA | 2 cut(s) | 17, 117 |
| HpyAV | CCTTC | 2 cut(s) | 52, 94 |
| HpyCH4III | ACNGT | 1 cut(s) | 54 |
| HpyCH4V | TGCA | 2 cut(s) | 68, 233 |
| HpyF3I | CTNAG | 1 cut(s) | 203 |
| LpnPI | CCDG | 2 cut(s) | 179, 190 |
| LweI | GCATC | 1 cut(s) | 90 |
| MaeI | CTAG | 1 cut(s) | 117 |
| MaeIII | GTNAC | 1 cut(s) | 107 |
| MboII | GAAGA | 1 cut(s) | 154 |
| MluCI | AATT | 2 cut(s) | 133, 183 |
| MnlI | CCTC | 2 cut(s) | 55, 234 |
| MseI | TTAA | 1 cut(s) | 182 |
| NmuCI | GTSAC | 1 cut(s) | 107 |
| PshBI | ATTAAT | 1 cut(s) | 182 |
| RsaI | GTAC | 1 cut(s) | 209 |
| RsaNI | GTAC | 1 cut(s) | 208 |
| SaqAI | TTAA | 1 cut(s) | 182 |
| SetI | ASST | 3 cut(s) | 66, 159, 209 |
| SfaNI | GCATC | 1 cut(s) | 90 |
| SgeI | CNNG | 5 cut(s) | 29, 34, 129, 178, 217 |
| Sse9I | AATT | 2 cut(s) | 133, 183 |
| SsiI | CCGC | 1 cut(s) | 44 |
| SspMI | CTAG | 1 cut(s) | 117 |
| TaaI | ACNGT | 1 cut(s) | 54 |
| TasI | AATT | 2 cut(s) | 133, 183 |
| Tru1I | TTAA | 1 cut(s) | 182 |
| Tru9I | TTAA | 1 cut(s) | 182 |
| TseFI | GTSAC | 1 cut(s) | 107 |
| Tsp45I | GTSAC | 1 cut(s) | 107 |
| TspDTI | ATGAA | 3 cut(s) | 44, 63, 235 |
| VspI | ATTAAT | 1 cut(s) | 182 |
| XbaI | TCTAGA | 1 cut(s) | 116 |
| XspI | CTAG | 1 cut(s) | 117 |