RchiOBHm_Chr3g0477331

Protein of unknown function (DUF502)

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
23182134 .. 23184199
2066 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44264

Sequence Viewer

Length: 435 bp
ATGCTTTTGGGTTTATTACATCAACTGTTACCCTTCAGTTTGCCTGCAAAGAAATGCTGTCCTACATTAGGAGGATCTTTTTCCTTTACTCCAACTAAAAAAATGACTTTGGGCTTGGAGTTTTTGACCAGCCACCAAGTATGTCAAGTATTGTCTTTTAGTTTGATGTGTCAAACACTTGCTAATATGTGGTTTTTCTCTCTTTTTTCTTCTTTATTTTCTTTTCAGAGAGATAATGAATATGAAGAGTTATGTAGTGTTTTTGTCCCAACAAATCATCTATATATAGGTGAAATATTTCTCGTTGACTCCAAATATATCATAAGACCAAATCTGTCTATCCGAGAAGGCATAGAGATCATTGTTTCTGGGGGTATGACAATGCCCCAAATCATTTCTGCTCAAGAAAGGGTTACCCAACAGAGTGATAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

144

Amino Acids

16.28

Weight (kDa)

5.85

Isoelectric Point (pI)

36.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0029865)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr2g0120041 RchiOBHm_Chr3g0477331

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 82
AcuI CTGAAG 1 cut(s) 19
AfiI CCNNNNNNNGG 1 cut(s) 68
AlwI GGATC 1 cut(s) 82
Asp700I GAANNNNTTC 1 cut(s) 297
AsuHPI GGTGA 1 cut(s) 302
BpuEI CTTGAG 1 cut(s) 387
Bsc4I CCNNNNNNNGG 1 cut(s) 68
BseLI CCNNNNNNNGG 1 cut(s) 68
BslFI GGGAC 1 cut(s) 251
BslI CCNNNNNNNGG 1 cut(s) 68
BsmFI GGGAC 1 cut(s) 251
Bsp143I GATC 2 cut(s) 74, 357
BspPI GGATC 1 cut(s) 82
BssMI GATC 2 cut(s) 74, 357
Bst4CI ACNGT 1 cut(s) 27
Bst6I CTCTTC 1 cut(s) 240
BstC8I GCNNGC 1 cut(s) 45
BstEII GGTNACC 1 cut(s) 412
BstENI CCTNNNNNAGG 1 cut(s) 66
BstKTI GATC 2 cut(s) 77, 360
BstMBI GATC 2 cut(s) 74, 357
BstPI GGTNACC 1 cut(s) 412
BstX2I RGATCY 1 cut(s) 74
BstYI RGATCY 1 cut(s) 74
Cac8I GCNNGC 1 cut(s) 45
CviJI RGCY 2 cut(s) 114, 132
CviKI_1 RGCY 2 cut(s) 114, 132
DpnI GATC 2 cut(s) 76, 359
DpnII GATC 2 cut(s) 74, 357
Eam1104I CTCTTC 1 cut(s) 240
EarI CTCTTC 1 cut(s) 240
Eco57I CTGAAG 1 cut(s) 19
Eco91I GGTNACC 1 cut(s) 412
EcoNI CCTNNNNNAGG 1 cut(s) 66
EcoO65I GGTNACC 1 cut(s) 412
FaqI GGGAC 1 cut(s) 251
HincII GTYRAC 1 cut(s) 307
HindII GTYRAC 1 cut(s) 307
HinfI GANTC 1 cut(s) 308
HphI GGTGA 1 cut(s) 302
Hpy166II GTNNAC 1 cut(s) 307
Hpy188I TCNGA 2 cut(s) 228, 344
Hpy188III TCNNGA 1 cut(s) 404
Hpy8I GTNNAC 1 cut(s) 307
HpyAV CCTTC 2 cut(s) 43, 341
HpyCH4III ACNGT 1 cut(s) 27
HpyCH4V TGCA 1 cut(s) 47
Kzo9I GATC 2 cut(s) 74, 357
LpnPI CCDG 3 cut(s) 57, 142, 354
MaeIII GTNAC 2 cut(s) 27, 412
MalI GATC 2 cut(s) 76, 359
MboI GATC 2 cut(s) 74, 357
MboII GAAGA 2 cut(s) 201, 257
MflI RGATCY 1 cut(s) 74
MluCI AATT 1 cut(s) 430
MlyI GAGTC 1 cut(s) 302
MmeI TCCRAC 1 cut(s) 116
MnlI CCTC 1 cut(s) 65
MroXI GAANNNNTTC 1 cut(s) 297
MseI TTAA 1 cut(s) 433
NdeII GATC 2 cut(s) 74, 357
PdmI GAANNNNTTC 1 cut(s) 297
PleI GAGTC 1 cut(s) 302
PpsI GAGTC 1 cut(s) 302
PspEI GGTNACC 1 cut(s) 412
PsuI RGATCY 1 cut(s) 74
SaqAI TTAA 1 cut(s) 433
Sau3AI GATC 2 cut(s) 74, 357
SchI GAGTC 1 cut(s) 302
SetI ASST 1 cut(s) 292
SmlI CTYRAG 1 cut(s) 402
SmoI CTYRAG 1 cut(s) 402
Sse9I AATT 1 cut(s) 430
SspI AATATT 1 cut(s) 297
TaaI ACNGT 1 cut(s) 27
TasI AATT 1 cut(s) 430
Tru1I TTAA 1 cut(s) 433
Tru9I TTAA 1 cut(s) 433
TspDTI ATGAA 2 cut(s) 252, 258
XagI CCTNNNNNAGG 1 cut(s) 66
XmnI GAANNNNTTC 1 cut(s) 297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.