RchiOBHm_Chr4g0397171

Microtubule-associated protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
13535501 .. 13541444
5944 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36950

Sequence Viewer

Length: 2487 bp
ATGATCAAGATGAAGGCGTATGCGCATGTTAAGGGGAGAGGAGCTGGGAGGGTCACTGTGCAACAGGTGGTTTTCGAGCTCAAACAAAAGGTGGTTATTGCGCTGAACAAGCTTGCTGATCGGGATACTTACCAAATAGGTGTCGAGGAGCTGGAGAAAATGGCGGAGTGCTTGAACCCAGATGGGATTGCTCCGTTTCTGTCGTGTATTTTGGATACAGATTCGGAACAGAAGAGTGCAGTGAGAAAGGAATGCATTAGGTTGATGGGTACATTAGTGAGGTATCATGAGGGGCATGTTGGAATGCATCTTGGTAAGATGGTTGCCAGTATTGTTAAGCGACTAAAAGACCCGGACTCTGTTGTGAGAGATGCATGTGTGGAGACTGTTGGTGTTCTGGCATCAAAATTGAGTGATGGTAGGGGTGACGGTGATGGGGTCTTTGTTGTCTTAGTAAGGCCACTTTTCGAAGCTCTGGGTGAACAAAACAGGCAGGTTCAGTCAGGTTCAGCATTGTGCCTAGCAAGGGTCATTGATAATACTCATGATCCCCCGGTTTCAATTCTGCAGCCAATGTTGAATCGAACGATAAAGTTGCTCAAGAATCCACATTTCATGGCTAAGCCAGCTGTTATTGAGTTGAACAGGAGCATTATCCAGGCAGGGGGTGCACCAACACAAAACATTCTCTCCGGTGCAATGGGAAGTATTCAAGAATCTCTCAAGAGTAATGACTGGGCAACACGCAAAGCTGCATGCATAGCTTTAGGGGAGATAGCTTCAAGTGGTGGATCCATCTTGGGCTCTTTTAAGGCTTCCTGCATTCGTTCCCTTGAATCATGTCGCTTTGACAAGGTGAAACCAGTTAGGGATACTGTCCTACAGGCACTGCAGTGCTGGAAAAGTCTTCTAGGAGCTGACACTCCTGAACCTTCAGAAGCTGGCTCTTCCATTAAAGAAAATTTCTTTGGTGGTGACTACAGTGATATCACAAGTGCCAGTGAATCTGGAAGGAAAGATCGCTCGCTCAGGAAAGCTGTTATTGGTGCGACTAAGAGCAGGATTCCTTTGTCTGGCAGAAGAACACGTCCAAATCATGTGGAAAATCATCAACGTTCCAGTGAAGATGATTGGCATATTGAAATTGCAGTTCCTAAAGCCCACAATGCTTCTTTGCCAGAATATCAGAATGAGGAATCTGAGGGTAGCACTATTACTAAGACATTAGAAAGGATGAGCACTGATGTTACAAGCACACATGATATGGGATATGAATATGTTCACATGGATGAAAAACAAGAATGTTCTTCTCGGTCCAATATTGTCACTGATGACATTGACACTAAGTTTGTCACAGTTTCTTGTAACAGTCTTGAGGAGAGTAGTTCGCAGAAGCCAGTGGGAAGAAATCAGCGGTTTGCAGCAGTTGAAGGTTTAAGTAGTGAGAAAATATACTCTGAAAGAGATCGTAGAAGTCTCGATTCAACTGTGACAGAATCAGATTCTCATACTCCACATGGATGTTGTTCACAAATGGCAAATGAAGTGTCGTGCATTAGAAAACAACTCTCAGAAATTGAAAACAAGCAGTCAAACTTAATGGATCTTTTACAGGCATTTACATCTGGTGTAATGGGTAGCTTGTCTATGTTACAAACAAGGGTGGTAGGCCTAGAACATGTTGTAGATAGATTATCTCAGAACCTAGTACATAGGGAGGAGCATTCCAATTTAGCAACCTCCAAACTCATGAAGCAAAACCAAAGTGTGCATTCTCCGAGACTCTCTACATGCACTCCTAGGCCATCTATAGATATGCGCAACAGGCAGCCTTCACTGTTGTCCGTGAAACATTCTGATATTTGGGAGGAAAACACATTTGTGAGGACCCAAGCAAACAATTCTGCAAGACAAGGTACAGAGACATGGAGCAATACTAAGGTGAAACTTACCAGGAATCCTGCTGGAAAAGATATTCGGAAAAGTTCTGGGCAGGGAACACAGAGGACAAGTCAAACAAGGACTGATGCTATGTTTACCTCAGCTTCTAGTGCCAAAGTTAGACAAAATGTTTTAGAAAGCAAGAATAACCTCTGGAAACAGGTGAAGGGTTTGCTCTGTGAAGGCGACTTAGATTCTGCATATGTTGAAGCTCTTTGTTCTGGTGATGAAATTGTTCTGATTGAACTTCTTGATAGAACTGGTCCAGTTCTAGAATGCTTGTCACCTAAAACTGCCGGCGATGTCCTCAGCACTTTAGCATCATATCTTGTAGAGCAAAGGTTTATCAACACAATAATCCCTTGGTTGCAGCAGATTGCTGATTTGAGCACCACTCATGGACCAAATTACTTTGGGCTGTCTGCAAAAGCAAGGCAAGAATTCTTGTCTTCTGTTCAGGAAGCTGTAAATATGGAATTTGTCAATTCTTCGGAGAGAAGATCTATCACTCAATTAGCTATGAAGTTCCAGCATAACTGGGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

828

Amino Acids

91.37

Weight (kDa)

7.81

Isoelectric Point (pI)

50.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TOR1L1_N PF24714 25 - 302 4.6e-123 TORTIFOLIA1 N-terminal
TOR1L1_C PF24713 698 - 827 5.9e-32 TORTIFOLIA1 C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012057)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 24, 1820
Acc36I ACCTGC 1 cut(s) 484
AciI CCGC 2 cut(s) 164, 1414
AclI AACGTT 1 cut(s) 1114
AclWI GGATC 4 cut(s) 542, 786, 799, 1611
AcsI RAATTY 3 cut(s) 961, 2381, 2417
AcuI CTGAAG 1 cut(s) 918
AfaI GTAC 3 cut(s) 271, 1710, 1918
AfiI CCNNNNNNNGG 3 cut(s) 526, 664, 1073
AflIII ACRYGT 2 cut(s) 1085, 1678
AjiI CACGTC 1 cut(s) 1088
AjnI CCWGG 2 cut(s) 657, 1952
AjuI GAANNNNNNNTTGG 2 cut(s) 951, 983
AleI CACNNNNGTG 2 cut(s) 892, 1880
Alw21I GWGCWC 4 cut(s) 81, 673, 1241, 2333
Alw26I GTCTC 4 cut(s) 377, 1481, 1774, 1916
Alw44I GTGCAC 1 cut(s) 669
AlwI GGATC 4 cut(s) 542, 786, 799, 1611
AlwNI CAGNNNCTG 2 cut(s) 889, 941
AoxI GGCC 3 cut(s) 458, 1669, 1802
ApaLI GTGCAC 1 cut(s) 669
ApeKI GCWGC 5 cut(s) 568, 752, 1421, 1828, 2311
ApoI RAATTY 3 cut(s) 961, 2381, 2417
ArsI GACNNNNNNTTYG 4 cut(s) 1331, 1363, 1532, 1564
Asp700I GAANNNNTTC 2 cut(s) 1278, 2175
AspA2I CCTAGG 1 cut(s) 1799
AspLEI GCGC 3 cut(s) 25, 103, 1821
AspS9I GGNCC 4 cut(s) 1314, 1887, 2204, 2342
AsuC2I CCSGG 2 cut(s) 353, 554
AsuHPI GGTGA 9 cut(s) 437, 443, 491, 868, 986, 1954, 2116, 2177, 2217
AsuII TTCGAA 1 cut(s) 468
AvaII GGWCC 4 cut(s) 1314, 1887, 2204, 2342
AvrII CCTAGG 1 cut(s) 1799
BaeGI GKGCMC 1 cut(s) 673
BaeI ACNNNNGTAYC 2 cut(s) 261, 294
BamHI GGATCC 1 cut(s) 791
BanII GRGCYC 2 cut(s) 81, 806
BbsI GAAGAC 2 cut(s) 899, 2382
Bbv12I GWGCWC 4 cut(s) 81, 673, 1241, 2333
BbvCI CCTCAGC 2 cut(s) 2041, 2249
BbvI GCAGC 5 cut(s) 580, 739, 1433, 1840, 2323
BccI CCATC 7 cut(s) 176, 259, 313, 410, 428, 803, 1813
BcgI CGANNNNNNTGC 2 cut(s) 577, 611
BciT130I CCWGG 2 cut(s) 659, 1954
BciVI GTATCC 3 cut(s) 118, 208, 865
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 2 cut(s) 353, 554
BcoDI GTCTC 4 cut(s) 377, 1481, 1774, 1916
BfaI CTAG 7 cut(s) 521, 911, 1673, 1706, 1800, 2049, 2213
BfmI CTRYAG 5 cut(s) 566, 881, 890, 979, 1809
BfuAI ACCTGC 1 cut(s) 484
BfuI GTATCC 3 cut(s) 118, 208, 865
BglII AGATCT 1 cut(s) 2441
BisI GCNGC 5 cut(s) 569, 753, 1422, 1829, 2312
BlnI CCTAGG 1 cut(s) 1799
BlpI GCTNAGC 1 cut(s) 621
BlsI GCNGC 5 cut(s) 570, 754, 1423, 1830, 2313
Bme1390I CCNGG 4 cut(s) 353, 554, 659, 1954
Bme18I GGWCC 4 cut(s) 1314, 1887, 2204, 2342
BmgBI CACGTC 1 cut(s) 1088
BmgT120I GGNCC 4 cut(s) 1314, 1887, 2204, 2342
BmiI GGNNCC 2 cut(s) 793, 1889
BmrFI CCNGG 4 cut(s) 353, 554, 659, 1954
BmrI ACTGGG 1 cut(s) 745
BmsI GCATC 5 cut(s) 316, 361, 410, 2017, 2270
BmuI ACTGGG 1 cut(s) 745
BpiI GAAGAC 2 cut(s) 899, 2382
BplI GAGNNNNNCTC 2 cut(s) 2320, 2352
BpmI CTGGAG 1 cut(s) 173
Bpu10I CCTNAGC 3 cut(s) 1028, 2041, 2249
Bpu1102I GCTNAGC 1 cut(s) 621
Bpu14I TTCGAA 1 cut(s) 468
BpuEI CTTGAG 3 cut(s) 584, 707, 1394
BpuMI CCSGG 2 cut(s) 353, 554
BsaJI CCNNGG 3 cut(s) 552, 1799, 2303
BsaWI WCCGGW 1 cut(s) 692
BsaXI ACNNNNNCTCC 4 cut(s) 674, 704, 1780, 1810
Bsc4I CCNNNNNNNGG 3 cut(s) 526, 664, 1073
Bse118I RCCGGY 1 cut(s) 2237
Bse1I ACTGG 9 cut(s) 327, 740, 863, 999, 1119, 1397, 2206, 2207, 2483
Bse3DI GCAATG 1 cut(s) 705
BseBI CCWGG 2 cut(s) 659, 1954
BseDI CCNNGG 3 cut(s) 552, 1799, 2303
BseGI GGATG 3 cut(s) 1239, 1294, 1526
BseLI CCNNNNNNNGG 3 cut(s) 526, 664, 1073
BseMI GCAATG 1 cut(s) 705
BseMII CTCAG 6 cut(s) 1042, 1191, 1584, 1712, 2055, 2263
BseNI ACTGG 9 cut(s) 327, 740, 863, 999, 1119, 1397, 2206, 2207, 2483
BseRI GAGGAG 4 cut(s) 54, 161, 1391, 1733
BseSI GKGCMC 1 cut(s) 673
BseXI GCAGC 5 cut(s) 580, 739, 1433, 1840, 2323
BseYI CCCAGC 1 cut(s) 44
BsgI GTGCAG 1 cut(s) 258
BshFI GGCC 3 cut(s) 460, 1671, 1804
BsiHKAI GWGCWC 4 cut(s) 81, 673, 1241, 2333
BsiSI CCGG 4 cut(s) 353, 554, 693, 2238
BslI CCNNNNNNNGG 3 cut(s) 526, 664, 1073
BsmAI GTCTC 4 cut(s) 377, 1481, 1774, 1916
BsmI GAATGC 6 cut(s) 257, 309, 822, 1723, 1771, 2222
BsnI GGCC 3 cut(s) 460, 1671, 1804
Bsp119I TTCGAA 1 cut(s) 468
Bsp1286I GDGCHC 5 cut(s) 81, 673, 806, 1241, 2333
Bsp143I GATC 8 cut(s) 3, 118, 547, 791, 1018, 1465, 1603, 2441
Bsp1720I GCTNAGC 1 cut(s) 621
BspACI CCGC 2 cut(s) 164, 1414
BspANI GGCC 3 cut(s) 460, 1671, 1804
BspCNI CTCAG 6 cut(s) 1041, 1192, 1583, 1711, 2054, 2262
BspHI TCATGA 3 cut(s) 286, 544, 1749
BspLI GGNNCC 2 cut(s) 793, 1889
BspMAI CTGCAG 2 cut(s) 570, 894
BspMI ACCTGC 1 cut(s) 484
BspPI GGATC 4 cut(s) 542, 786, 799, 1611
BspQI GCTCTTC 1 cut(s) 952
BspT104I TTCGAA 1 cut(s) 468
BsrDI GCAATG 1 cut(s) 705
BsrFI RCCGGY 1 cut(s) 2237
BsrI ACTGG 9 cut(s) 327, 740, 863, 999, 1119, 1397, 2206, 2207, 2483
BssAI RCCGGY 1 cut(s) 2237
BssECI CCNNGG 3 cut(s) 552, 1799, 2303
BssMI GATC 8 cut(s) 3, 118, 547, 791, 1018, 1465, 1603, 2441
BssT1I CCWWGG 2 cut(s) 1799, 2303
Bst2UI CCWGG 2 cut(s) 659, 1954
Bst4CI ACNGT 9 cut(s) 58, 388, 431, 877, 983, 1357, 1370, 1489, 1839
Bst6I CTCTTC 2 cut(s) 227, 952
BstAPI GCANNNNNTGC 1 cut(s) 668
BstBI TTCGAA 1 cut(s) 468
BstC8I GCNNGC 6 cut(s) 114, 627, 757, 943, 1025, 2239
BstF5I GGATG 3 cut(s) 1239, 1294, 1526
BstHHI GCGC 3 cut(s) 25, 103, 1821
BstKTI GATC 8 cut(s) 6, 121, 550, 794, 1021, 1468, 1606, 2444
BstMAI GTCTC 4 cut(s) 377, 1481, 1774, 1916
BstMBI GATC 8 cut(s) 3, 118, 547, 791, 1018, 1465, 1603, 2441
BstMWI GCNNNNNNNGC 7 cut(s) 109, 626, 668, 761, 1166, 1825, 2051
BstNI CCWGG 2 cut(s) 659, 1954
BstNSI RCATGY 6 cut(s) 29, 299, 378, 759, 1682, 1794
BstSCI CCNGG 4 cut(s) 351, 552, 657, 1952
BstSFI CTRYAG 5 cut(s) 566, 881, 890, 979, 1809
BstSLI GKGCMC 1 cut(s) 673
BstV1I GCAGC 5 cut(s) 580, 739, 1433, 1840, 2323
BstV2I GAAGAC 2 cut(s) 899, 2382
BstX2I RGATCY 3 cut(s) 791, 1603, 2441
BstYI RGATCY 3 cut(s) 791, 1603, 2441
BsuI GTATCC 3 cut(s) 118, 208, 865
BsuRI GGCC 3 cut(s) 460, 1671, 1804
BtgZI GCGATG 1 cut(s) 2256
BtrI CACGTC 1 cut(s) 1088
BtsCI GGATG 3 cut(s) 1239, 1294, 1526
BtsI GCAGTG 3 cut(s) 246, 887, 899
BveI ACCTGC 1 cut(s) 484
Cac8I GCNNGC 6 cut(s) 114, 627, 757, 943, 1025, 2239
CaiI CAGNNNCTG 2 cut(s) 889, 941
CciI TCATGA 3 cut(s) 286, 544, 1749
CfoI GCGC 3 cut(s) 25, 103, 1821
Cfr10I RCCGGY 1 cut(s) 2237
Cfr13I GGNCC 4 cut(s) 1314, 1887, 2204, 2342
Csp6I GTAC 3 cut(s) 270, 1709, 1917
CspCI CAANNNNNGTGG 2 cut(s) 1080, 1115
CviQI GTAC 3 cut(s) 270, 1709, 1917
DpnI GATC 8 cut(s) 5, 120, 549, 793, 1020, 1467, 1605, 2443
DpnII GATC 8 cut(s) 3, 118, 547, 791, 1018, 1465, 1603, 2441
Eam1104I CTCTTC 2 cut(s) 227, 952
EarI CTCTTC 2 cut(s) 227, 952
EciI GGCGGA 1 cut(s) 179
Ecl136II GAGCTC 1 cut(s) 79
Eco130I CCWWGG 2 cut(s) 1799, 2303
Eco147I AGGCCT 1 cut(s) 1671
Eco24I GRGCYC 2 cut(s) 81, 806
Eco32I GATATC 1 cut(s) 988
Eco47I GGWCC 4 cut(s) 1314, 1887, 2204, 2342
Eco53kI GAGCTC 1 cut(s) 79
Eco57I CTGAAG 1 cut(s) 918
EcoICRI GAGCTC 1 cut(s) 79
EcoO109I RGGNCCY 1 cut(s) 1887
EcoRI GAATTC 1 cut(s) 2381
EcoRII CCWGG 2 cut(s) 657, 1952
EcoRV GATATC 1 cut(s) 988
EcoT14I CCWWGG 2 cut(s) 1799, 2303
EcoT22I ATGCAT 4 cut(s) 257, 309, 376, 761
EcoT38I GRGCYC 2 cut(s) 81, 806
ErhI CCWWGG 2 cut(s) 1799, 2303
FauNDI CATATG 1 cut(s) 2143
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 5 cut(s) 569, 753, 1422, 1829, 2312
FokI GGATG 3 cut(s) 1246, 1301, 1533
FriOI GRGCYC 2 cut(s) 81, 806
Fsp4HI GCNGC 5 cut(s) 569, 753, 1422, 1829, 2312
FspAI RTGCGCAY 1 cut(s) 24
FspBI CTAG 7 cut(s) 521, 911, 1673, 1706, 1800, 2049, 2213
FspI TGCGCA 2 cut(s) 24, 1820
GlaI GCGC 3 cut(s) 24, 102, 1820
GluI GCNGC 5 cut(s) 569, 753, 1422, 1829, 2312
GsaI CCCAGC 1 cut(s) 48
GsuI CTGGAG 1 cut(s) 173
HaeIII GGCC 3 cut(s) 460, 1671, 1804
HapII CCGG 4 cut(s) 353, 554, 693, 2238
HhaI GCGC 3 cut(s) 25, 103, 1821
Hin6I GCGC 3 cut(s) 23, 101, 1819
HinP1I GCGC 3 cut(s) 23, 101, 1819
HindIII AAGCTT 1 cut(s) 110
HpaII CCGG 4 cut(s) 353, 554, 693, 2238
HphI GGTGA 9 cut(s) 437, 443, 491, 868, 986, 1954, 2116, 2177, 2217
Hpy166II GTNNAC 5 cut(s) 482, 671, 1282, 1529, 2037
Hpy8I GTNNAC 5 cut(s) 482, 671, 1282, 1529, 2037
HpyAV CCTTC 7 cut(s) 7, 942, 1005, 1424, 1842, 2101, 2117
HpyCH4III ACNGT 9 cut(s) 58, 388, 431, 877, 983, 1357, 1370, 1489, 1839
HpyCH4IV ACGT 2 cut(s) 1087, 1114
HpyF10VI GCNNNNNNNGC 7 cut(s) 109, 626, 668, 761, 1166, 1825, 2051
HpySE526I ACGT 2 cut(s) 1087, 1114
HspAI GCGC 3 cut(s) 23, 101, 1819
KroI GCCGGC 1 cut(s) 2237
KroNI GCCGGC 1 cut(s) 2239
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 8 cut(s) 3, 118, 547, 791, 1018, 1465, 1603, 2441
LguI GCTCTTC 1 cut(s) 952
LmnI GCTCC 7 cut(s) 41, 148, 196, 648, 914, 1720, 1929
Lsp1109I GCAGC 5 cut(s) 580, 739, 1433, 1840, 2323
LweI GCATC 5 cut(s) 316, 361, 410, 2017, 2270
MaeI CTAG 7 cut(s) 521, 911, 1673, 1706, 1800, 2049, 2213
MaeII ACGT 2 cut(s) 1087, 1114
MalI GATC 8 cut(s) 5, 120, 549, 793, 1020, 1467, 1605, 2443
MboI GATC 8 cut(s) 3, 118, 547, 791, 1018, 1465, 1603, 2441
MflI RGATCY 3 cut(s) 791, 1603, 2441
MhlI GDGCHC 5 cut(s) 81, 673, 806, 1241, 2333
MlyI GAGTC 2 cut(s) 350, 1776
MmeI TCCRAC 1 cut(s) 280
Mph1103I ATGCAT 4 cut(s) 257, 309, 376, 761
MroNI GCCGGC 1 cut(s) 2237
MroXI GAANNNNTTC 2 cut(s) 1278, 2175
MseI TTAA 6 cut(s) 30, 336, 810, 954, 1436, 1598
MslI CAYNNNNRTG 4 cut(s) 892, 1287, 1519, 1880
MspA1I CMGCKG 2 cut(s) 629, 1414
MspI CCGG 4 cut(s) 353, 554, 693, 2238
MspR9I CCNGG 4 cut(s) 353, 554, 659, 1954
Mva1269I GAATGC 6 cut(s) 257, 309, 822, 1723, 1771, 2222
MvaI CCWGG 2 cut(s) 659, 1954
MwoI GCNNNNNNNGC 7 cut(s) 109, 626, 668, 761, 1166, 1825, 2051
NaeI GCCGGC 1 cut(s) 2239
NciI CCSGG 2 cut(s) 353, 554
NdeI CATATG 1 cut(s) 2143
NdeII GATC 8 cut(s) 3, 118, 547, 791, 1018, 1465, 1603, 2441
NgoMIV GCCGGC 1 cut(s) 2237
NlaIV GGNNCC 2 cut(s) 793, 1889
NmuCI GTSAC 7 cut(s) 52, 425, 974, 1324, 1351, 1489, 2223
NsbI TGCGCA 2 cut(s) 24, 1820
NsiI ATGCAT 4 cut(s) 257, 309, 376, 761
NspI RCATGY 6 cut(s) 29, 299, 378, 759, 1682, 1794
NspV TTCGAA 1 cut(s) 468
OliI CACNNNNGTG 2 cut(s) 892, 1880
PaeI GCATGC 1 cut(s) 759
PagI TCATGA 3 cut(s) 286, 544, 1749
PceI AGGCCT 1 cut(s) 1671
PciI ACATGT 1 cut(s) 1678
PciSI GCTCTTC 1 cut(s) 952
PctI GAATGC 6 cut(s) 257, 309, 822, 1723, 1771, 2222
PdiI GCCGGC 1 cut(s) 2239
PdmI GAANNNNTTC 2 cut(s) 1278, 2175
PkrI GCNGC 5 cut(s) 570, 754, 1423, 1830, 2313
PleI GAGTC 2 cut(s) 350, 1776
PpsI GAGTC 2 cut(s) 350, 1776
PpuMI RGGWCCY 1 cut(s) 1887
PscI ACATGT 1 cut(s) 1678
Psp124BI GAGCTC 1 cut(s) 81
Psp1406I AACGTT 1 cut(s) 1114
Psp5II RGGWCCY 1 cut(s) 1887
Psp6I CCWGG 2 cut(s) 657, 1952
PspFI CCCAGC 1 cut(s) 44
PspGI CCWGG 2 cut(s) 657, 1952
PspN4I GGNNCC 2 cut(s) 793, 1889
PspPI GGNCC 4 cut(s) 1314, 1887, 2204, 2342
PspPPI RGGWCCY 1 cut(s) 1887
PstI CTGCAG 2 cut(s) 570, 894
PstNI CAGNNNCTG 2 cut(s) 889, 941
PsuI RGATCY 3 cut(s) 791, 1603, 2441
PvuII CAGCTG 1 cut(s) 629
RsaI GTAC 3 cut(s) 271, 1710, 1918
RsaNI GTAC 3 cut(s) 270, 1709, 1917
RseI CAYNNNNRTG 4 cut(s) 892, 1287, 1519, 1880
SacI GAGCTC 1 cut(s) 81
SapI GCTCTTC 1 cut(s) 952
SaqAI TTAA 6 cut(s) 30, 336, 810, 954, 1436, 1598
SatI GCNGC 5 cut(s) 569, 753, 1422, 1829, 2312
Sau3AI GATC 8 cut(s) 3, 118, 547, 791, 1018, 1465, 1603, 2441
Sau96I GGNCC 4 cut(s) 1314, 1887, 2204, 2342
SchI GAGTC 2 cut(s) 350, 1776
ScrFI CCNGG 4 cut(s) 353, 554, 659, 1954
SduI GDGCHC 5 cut(s) 81, 673, 806, 1241, 2333
SfaNI GCATC 5 cut(s) 316, 361, 410, 2017, 2270
SfcI CTRYAG 5 cut(s) 566, 881, 890, 979, 1809
SfuI TTCGAA 1 cut(s) 468
SinI GGWCC 4 cut(s) 1314, 1887, 2204, 2342
SmiMI CAYNNNNRTG 4 cut(s) 892, 1287, 1519, 1880
SmlI CTYRAG 3 cut(s) 599, 722, 1373
SmoI CTYRAG 3 cut(s) 599, 722, 1373
SphI GCATGC 1 cut(s) 759
SseBI AGGCCT 1 cut(s) 1671
SsiI CCGC 2 cut(s) 164, 1414
SspI AATATT 1 cut(s) 1321
SspMI CTAG 7 cut(s) 521, 911, 1673, 1706, 1800, 2049, 2213
SstI GAGCTC 1 cut(s) 81
StuI AGGCCT 1 cut(s) 1671
StyD4I CCNGG 4 cut(s) 351, 552, 657, 1952
StyI CCWWGG 2 cut(s) 1799, 2303
TaaI ACNGT 9 cut(s) 58, 388, 431, 877, 983, 1357, 1370, 1489, 1839
TaiI ACGT 2 cut(s) 1090, 1117
TaqI TCGA 5 cut(s) 75, 144, 468, 583, 1479
TaqII GACCGA 1 cut(s) 1302
TatI WGTACW 1 cut(s) 1708
Tru1I TTAA 6 cut(s) 30, 336, 810, 954, 1436, 1598
Tru9I TTAA 6 cut(s) 30, 336, 810, 954, 1436, 1598
TseFI GTSAC 7 cut(s) 52, 425, 974, 1324, 1351, 1489, 2223
TseI GCWGC 5 cut(s) 568, 752, 1421, 1828, 2311
Tsp45I GTSAC 7 cut(s) 52, 425, 974, 1324, 1351, 1489, 2223
TspDTI ATGAA 8 cut(s) 26, 604, 1287, 1305, 1557, 1766, 2184, 2477
TspGWI ACGGA 2 cut(s) 183, 1834
VneI GTGCAC 1 cut(s) 669
VpaK11BI GGWCC 4 cut(s) 1314, 1887, 2204, 2342
XapI RAATTY 3 cut(s) 961, 2381, 2417
XbaI TCTAGA 1 cut(s) 2212
XceI RCATGY 6 cut(s) 29, 299, 378, 759, 1682, 1794
XmaJI CCTAGG 1 cut(s) 1799
XmnI GAANNNNTTC 2 cut(s) 1278, 2175
XspI CTAG 7 cut(s) 521, 911, 1673, 1706, 1800, 2049, 2213
Zsp2I ATGCAT 4 cut(s) 257, 309, 376, 761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.