E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0401901 |
| rosa_rugosa | Rorug07G0091000 |
| rosa_samantha | Rh5CG151900 Rh7CG227800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 168 |
| AcuI | CTGAAG | 1 cut(s) | 29 |
| AluBI | AGCT | 1 cut(s) | 21 |
| AluI | AGCT | 1 cut(s) | 21 |
| Alw21I | GWGCWC | 1 cut(s) | 64 |
| AlwI | GGATC | 1 cut(s) | 168 |
| Ama87I | CYCGRG | 1 cut(s) | 65 |
| AsuHPI | GGTGA | 1 cut(s) | 140 |
| AvaI | CYCGRG | 1 cut(s) | 65 |
| Bbv12I | GWGCWC | 1 cut(s) | 64 |
| BccI | CCATC | 1 cut(s) | 125 |
| BmeT110I | CYCGRG | 1 cut(s) | 65 |
| BmsI | GCATC | 1 cut(s) | 100 |
| Bsa29I | ATCGAT | 1 cut(s) | 172 |
| BseCI | ATCGAT | 1 cut(s) | 172 |
| BshVI | ATCGAT | 1 cut(s) | 172 |
| BsiHKAI | GWGCWC | 1 cut(s) | 64 |
| BsiHKCI | CYCGRG | 1 cut(s) | 65 |
| BsiSI | CCGG | 1 cut(s) | 95 |
| BsoBI | CYCGRG | 1 cut(s) | 65 |
| Bsp1286I | GDGCHC | 1 cut(s) | 64 |
| Bsp143I | GATC | 2 cut(s) | 14, 173 |
| BspDI | ATCGAT | 1 cut(s) | 172 |
| BspPI | GGATC | 1 cut(s) | 168 |
| BssMI | GATC | 2 cut(s) | 14, 173 |
| BstC8I | GCNNGC | 1 cut(s) | 23 |
| BstDEI | CTNAG | 1 cut(s) | 30 |
| BstKTI | GATC | 2 cut(s) | 17, 176 |
| BstMBI | GATC | 2 cut(s) | 14, 173 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 59 |
| Bsu15I | ATCGAT | 1 cut(s) | 172 |
| BsuTUI | ATCGAT | 1 cut(s) | 172 |
| BtsIMutI | CAGTG | 1 cut(s) | 151 |
| Cac8I | GCNNGC | 1 cut(s) | 23 |
| ClaI | ATCGAT | 1 cut(s) | 172 |
| CviJI | RGCY | 4 cut(s) | 21, 70, 94, 135 |
| CviKI_1 | RGCY | 4 cut(s) | 21, 70, 94, 135 |
| DdeI | CTNAG | 1 cut(s) | 30 |
| DpnI | GATC | 2 cut(s) | 16, 175 |
| DpnII | GATC | 2 cut(s) | 14, 173 |
| Eco57I | CTGAAG | 1 cut(s) | 29 |
| Eco88I | CYCGRG | 1 cut(s) | 65 |
| FaiI | YATR | 2 cut(s) | 11, 107 |
| HapII | CCGG | 1 cut(s) | 95 |
| HindIII | AAGCTT | 1 cut(s) | 19 |
| HinfI | GANTC | 2 cut(s) | 34, 86 |
| HpaII | CCGG | 1 cut(s) | 95 |
| HphI | GGTGA | 1 cut(s) | 140 |
| Hpy188III | TCNNGA | 1 cut(s) | 177 |
| HpyAV | CCTTC | 1 cut(s) | 50 |
| HpyCH4V | TGCA | 1 cut(s) | 25 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 59 |
| HpyF3I | CTNAG | 1 cut(s) | 30 |
| Kzo9I | GATC | 2 cut(s) | 14, 173 |
| LpnPI | CCDG | 1 cut(s) | 108 |
| LweI | GCATC | 1 cut(s) | 100 |
| MalI | GATC | 2 cut(s) | 16, 175 |
| MboI | GATC | 2 cut(s) | 14, 173 |
| MhlI | GDGCHC | 1 cut(s) | 64 |
| MlyI | GAGTC | 1 cut(s) | 80 |
| MnlI | CCTC | 1 cut(s) | 143 |
| MslI | CAYNNNNRTG | 1 cut(s) | 108 |
| MspI | CCGG | 1 cut(s) | 95 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 59 |
| NdeII | GATC | 2 cut(s) | 14, 173 |
| PfeI | GAWTC | 1 cut(s) | 34 |
| PleI | GAGTC | 1 cut(s) | 80 |
| PpsI | GAGTC | 1 cut(s) | 80 |
| RseI | CAYNNNNRTG | 1 cut(s) | 108 |
| Sau3AI | GATC | 2 cut(s) | 14, 173 |
| SchI | GAGTC | 1 cut(s) | 80 |
| SduI | GDGCHC | 1 cut(s) | 64 |
| SetI | ASST | 3 cut(s) | 23, 61, 154 |
| SfaNI | GCATC | 1 cut(s) | 100 |
| SgeI | CNNG | 8 cut(s) | 30, 34, 77, 79, 95, 103, 107, 134 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 108 |
| TaqI | TCGA | 2 cut(s) | 84, 172 |
| TfiI | GAWTC | 1 cut(s) | 34 |
| TscAI | CASTG | 1 cut(s) | 151 |
| TspRI | CASTG | 1 cut(s) | 151 |