RchiOBHm_Chr4g0408761

Phosphoenolpyruvate phosphomutase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
31563196 .. 31563788
593 bp
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UTR
Exon/CDS
Intron
PRQ37984

Sequence Viewer

Length: 129 bp
ATGGTTCCAGCTCTTAGGGGTGTAAACATCAAAGAATTGTTGAATGAGGCAGCTGATGAAATGGGAGGGAAGCAGCTGTTAGATTTTAATGACACAATGGGTGATAGAATTCAAGTTTTTCTGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

42

Amino Acids

4.69

Weight (kDa)

4.41

Isoelectric Point (pI)

25.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030106)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr4g0408761
rosa_multiflora Rmu_sc0042692.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 108
AgsI TTSAA 2 cut(s) 43, 113
AluBI AGCT 3 cut(s) 11, 53, 76
AluI AGCT 3 cut(s) 11, 53, 76
ApeKI GCWGC 2 cut(s) 50, 73
ApoI RAATTY 1 cut(s) 108
AsuHPI GGTGA 1 cut(s) 113
BbvI GCAGC 2 cut(s) 62, 85
BisI GCNGC 2 cut(s) 51, 74
BlsI GCNGC 2 cut(s) 52, 75
BmiI GGNNCC 1 cut(s) 6
BseXI GCAGC 2 cut(s) 62, 85
BspLI GGNNCC 1 cut(s) 6
BstDEI CTNAG 1 cut(s) 14
BstV1I GCAGC 2 cut(s) 62, 85
CviJI RGCY 3 cut(s) 11, 53, 76
CviKI_1 RGCY 3 cut(s) 11, 53, 76
DdeI CTNAG 1 cut(s) 14
EcoRI GAATTC 1 cut(s) 108
Fnu4HI GCNGC 2 cut(s) 51, 74
Fsp4HI GCNGC 2 cut(s) 51, 74
GluI GCNGC 2 cut(s) 51, 74
HphI GGTGA 1 cut(s) 113
Hpy166II GTNNAC 1 cut(s) 25
Hpy188III TCNNGA 1 cut(s) 122
Hpy8I GTNNAC 1 cut(s) 25
HpyF3I CTNAG 1 cut(s) 14
LpnPI CCDG 2 cut(s) 21, 107
Lsp1109I GCAGC 2 cut(s) 62, 85
MluCI AATT 2 cut(s) 35, 108
MnlI CCTC 2 cut(s) 40, 59
MseI TTAA 1 cut(s) 87
MspA1I CMGCKG 2 cut(s) 53, 76
NlaIV GGNNCC 1 cut(s) 6
PkrI GCNGC 2 cut(s) 52, 75
PspN4I GGNNCC 1 cut(s) 6
PvuII CAGCTG 2 cut(s) 53, 76
SaqAI TTAA 1 cut(s) 87
SatI GCNGC 2 cut(s) 51, 74
SetI ASST 3 cut(s) 13, 55, 78
SgeI CNNG 2 cut(s) 20, 125
Sse9I AATT 2 cut(s) 35, 108
TasI AATT 2 cut(s) 35, 108
Tru1I TTAA 1 cut(s) 87
Tru9I TTAA 1 cut(s) 87
TseI GCWGC 2 cut(s) 50, 73
TspDTI ATGAA 1 cut(s) 72
XapI RAATTY 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.