RchiOBHm_Chr4g0418411

Thiol-disulfide oxidoreductase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
43861748 .. 43867258
5511 bp
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UTR
Exon/CDS
Intron
PRQ38840

Sequence Viewer

Length: 234 bp
ATGCTTGCACATGGATTAGTTGCCACACACAGTGTACAATTGTTGACTGCAAAGAGTTTACCTTATGGATTTGGGAATTCTGATGCTAGTGTGGTTTTACTTGGGACTACAACCTCCATGGCAGCTGGTAGTGCTTGTTTCTTATACATTCTTAGCACACAGTTTTCAGGAACTTCGTGCTTCGTATTGTTTGTAATCAGCTTTCCTTTCCTTCAGCTTATTTCATCACTTTAA

Protein Analysis

77

Amino Acids

8.05

Weight (kDa)

6.68

Isoelectric Point (pI)

29.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022747)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr4g0418411 RchiOBHm_Chr7g0224811
rosa_samantha Rh2BG517900 Rh2DG529600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 76
AcuI CTGAAG 1 cut(s) 197
AdeI CACNNNGTG 1 cut(s) 32
AfaI GTAC 1 cut(s) 36
AluBI AGCT 3 cut(s) 125, 201, 217
AluI AGCT 3 cut(s) 125, 201, 217
ApeKI GCWGC 1 cut(s) 122
ApoI RAATTY 1 cut(s) 76
BbvI GCAGC 1 cut(s) 134
BfaI CTAG 1 cut(s) 87
BisI GCNGC 1 cut(s) 123
BlsI GCNGC 1 cut(s) 124
BmsI GCATC 1 cut(s) 73
BsaJI CCNNGG 1 cut(s) 117
BseDI CCNNGG 1 cut(s) 117
BseXI GCAGC 1 cut(s) 134
BslFI GGGAC 1 cut(s) 118
BsmFI GGGAC 1 cut(s) 118
Bsp1407I TGTACA 1 cut(s) 34
Bsp19I CCATGG 1 cut(s) 117
BsrGI TGTACA 1 cut(s) 34
BssECI CCNNGG 1 cut(s) 117
BssT1I CCWWGG 1 cut(s) 117
Bst4CI ACNGT 2 cut(s) 32, 162
BstAUI TGTACA 1 cut(s) 34
BstC8I GCNNGC 1 cut(s) 6
BstDEI CTNAG 1 cut(s) 152
BstDSI CCRYGG 1 cut(s) 117
BstMWI GCNNNNNNNGC 1 cut(s) 131
BstV1I GCAGC 1 cut(s) 134
BtgI CCRYGG 1 cut(s) 117
BtsIMutI CAGTG 1 cut(s) 37
Cac8I GCNNGC 1 cut(s) 6
Csp6I GTAC 1 cut(s) 35
CviAII CATG 2 cut(s) 11, 118
CviJI RGCY 3 cut(s) 125, 201, 217
CviKI_1 RGCY 3 cut(s) 125, 201, 217
CviQI GTAC 1 cut(s) 35
DdeI CTNAG 1 cut(s) 152
DraIII CACNNNGTG 1 cut(s) 32
Eco130I CCWWGG 1 cut(s) 117
Eco57I CTGAAG 1 cut(s) 197
EcoRI GAATTC 1 cut(s) 76
EcoT14I CCWWGG 1 cut(s) 117
ErhI CCWWGG 1 cut(s) 117
FaeI CATG 2 cut(s) 14, 121
FaiI YATR 4 cut(s) 12, 66, 119, 145
FaqI GGGAC 1 cut(s) 118
FatI CATG 2 cut(s) 10, 117
Fnu4HI GCNGC 1 cut(s) 123
Fsp4HI GCNGC 1 cut(s) 123
FspBI CTAG 1 cut(s) 87
GluI GCNGC 1 cut(s) 123
Hin1II CATG 2 cut(s) 14, 121
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
Hpy166II GTNNAC 3 cut(s) 35, 45, 59
Hpy188I TCNGA 1 cut(s) 82
Hpy188III TCNNGA 1 cut(s) 168
Hpy8I GTNNAC 3 cut(s) 35, 45, 59
HpyAV CCTTC 1 cut(s) 221
HpyCH4III ACNGT 2 cut(s) 32, 162
HpyCH4V TGCA 2 cut(s) 8, 50
HpyF10VI GCNNNNNNNGC 1 cut(s) 131
HpyF3I CTNAG 1 cut(s) 152
Hsp92II CATG 2 cut(s) 14, 121
LpnPI CCDG 2 cut(s) 111, 153
Lsp1109I GCAGC 1 cut(s) 134
LweI GCATC 1 cut(s) 73
MaeI CTAG 1 cut(s) 87
MfeI CAATTG 1 cut(s) 38
MluCI AATT 2 cut(s) 38, 76
MnlI CCTC 1 cut(s) 124
MseI TTAA 1 cut(s) 232
MspA1I CMGCKG 1 cut(s) 125
MunI CAATTG 1 cut(s) 38
MwoI GCNNNNNNNGC 1 cut(s) 131
NcoI CCATGG 1 cut(s) 117
NlaIII CATG 2 cut(s) 14, 121
PkrI GCNGC 1 cut(s) 124
PvuII CAGCTG 1 cut(s) 125
RsaI GTAC 1 cut(s) 36
RsaNI GTAC 1 cut(s) 35
SaqAI TTAA 1 cut(s) 232
SatI GCNGC 1 cut(s) 123
SetI ASST 5 cut(s) 64, 116, 127, 203, 219
SfaNI GCATC 1 cut(s) 73
SgeI CNNG 9 cut(s) 17, 23, 99, 113, 130, 138, 147, 180, 189
Sse9I AATT 2 cut(s) 38, 76
SspMI CTAG 1 cut(s) 87
StyI CCWWGG 1 cut(s) 117
TaaI ACNGT 2 cut(s) 32, 162
TasI AATT 2 cut(s) 38, 76
TatI WGTACW 1 cut(s) 34
Tru1I TTAA 1 cut(s) 232
Tru9I TTAA 1 cut(s) 232
TscAI CASTG 1 cut(s) 37
TseI GCWGC 1 cut(s) 122
TspDTI ATGAA 1 cut(s) 213
TspRI CASTG 1 cut(s) 37
XapI RAATTY 1 cut(s) 76
XspI CTAG 1 cut(s) 87
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.