RchiOBHm_Chr5g0025501

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
19402978 .. 19403217
240 bp
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UTR
Exon/CDS
Intron
PRQ30514

Sequence Viewer

Length: 150 bp
ATGTTGATATACGAGTACATGCCAAACAAAAGCTTGGACTACTTTTTATTTGATTCAACTAGATGCCAGCAATTAGACTGGAACAACCGTTTCAGCATAATTGAAGGAATTGCTCAAGGTTTACTTTATTTGCACAGATATTTTTTTTAA

Protein Analysis

49

Amino Acids

6.07

Weight (kDa)

5.5

Isoelectric Point (pI)

48.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0021416)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 17
AgsI TTSAA 2 cut(s) 57, 104
AluBI AGCT 1 cut(s) 33
AluI AGCT 1 cut(s) 33
BfaI CTAG 1 cut(s) 60
BmsI GCATC 1 cut(s) 53
BpuEI CTTGAG 1 cut(s) 99
Bse1I ACTGG 1 cut(s) 83
BseNI ACTGG 1 cut(s) 83
BsrI ACTGG 1 cut(s) 83
Bst4CI ACNGT 1 cut(s) 89
BstC8I GCNNGC 1 cut(s) 68
BstNSI RCATGY 1 cut(s) 22
Cac8I GCNNGC 1 cut(s) 68
Csp6I GTAC 1 cut(s) 16
CviAII CATG 1 cut(s) 19
CviJI RGCY 1 cut(s) 33
CviKI_1 RGCY 1 cut(s) 33
CviQI GTAC 1 cut(s) 16
FaeI CATG 1 cut(s) 22
FaiI YATR 3 cut(s) 10, 20, 98
FalI AAGNNNNNCTT 2 cut(s) 108, 140
FatI CATG 1 cut(s) 18
FspBI CTAG 1 cut(s) 60
FspEI CC 7 cut(s) 20, 36, 64, 80, 90, 101, 102
Hin1II CATG 1 cut(s) 22
HindIII AAGCTT 1 cut(s) 31
HinfI GANTC 1 cut(s) 53
Hpy166II GTNNAC 1 cut(s) 122
Hpy8I GTNNAC 1 cut(s) 122
HpyAV CCTTC 1 cut(s) 98
HpyCH4III ACNGT 1 cut(s) 89
HpyCH4V TGCA 1 cut(s) 133
Hsp92II CATG 1 cut(s) 22
LpnPI CCDG 2 cut(s) 64, 80
LweI GCATC 1 cut(s) 53
MaeI CTAG 1 cut(s) 60
MluCI AATT 3 cut(s) 71, 99, 108
MseI TTAA 1 cut(s) 148
NlaIII CATG 1 cut(s) 22
NspI RCATGY 1 cut(s) 22
PfeI GAWTC 1 cut(s) 53
RsaI GTAC 1 cut(s) 17
RsaNI GTAC 1 cut(s) 16
SaqAI TTAA 1 cut(s) 148
SetI ASST 2 cut(s) 35, 121
SfaNI GCATC 1 cut(s) 53
SgeI CNNG 7 cut(s) 25, 31, 46, 72, 79, 91, 128
SmlI CTYRAG 1 cut(s) 114
SmoI CTYRAG 1 cut(s) 114
Sse9I AATT 3 cut(s) 71, 99, 108
SspMI CTAG 1 cut(s) 60
TaaI ACNGT 1 cut(s) 89
TasI AATT 3 cut(s) 71, 99, 108
TatI WGTACW 1 cut(s) 15
TfiI GAWTC 1 cut(s) 53
Tru1I TTAA 1 cut(s) 148
Tru9I TTAA 1 cut(s) 148
XceI RCATGY 1 cut(s) 22
XspI CTAG 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.