RchiOBHm_Chr5g0043981

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0015247
Physical Location & Seq
Reverse (-)
39071009 .. 39072811
1803 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32221

Sequence Viewer

Length: 1494 bp
ATGGCTGGTTTGGAATCCATTTCCACCGTTTTCTGCTTCCTCTTCTTCTCCTTCACCGCTTTGTTCTCTCTCTTCTCCCTGCTTGTATTTATTCTCCGGCTCCGGCCCTGGTGCAACTGCCACGTCTGCCGGAACTTCCTGACCTCGAGCTGGACCAAAGACTTCGACAACTTCTGTGACTGGTACACCCATCTGCTGAGGAAGTCTCCGACGGGGACTATCCACCTCCACGTCCTCGGCAACATCGTCACTTCCAACCCGGAAAACGTGGAGCACATCCTCAAAACCAGGTTCGACAACTACCCCAAAGGCAAGCCGTTCACTGTGATCCTCGGCGATCTTTTGGGCCGCGGGATCTTCAACGTCGACGGCGACACGTGGCGGTTCCAGCGCAAGATGGCCAGTCTGGAGCTCGGCAGCCTCTCCGTTCGGTCCCACGCGCTCGAGGTCGTCGCCGCCGAGATTCACTCCAGGCTGATTCCGCTGCTCGCCTCGGTTTCCGGGAAGGAGTCAAACGGCGGCGTTTTGGATCTGCAAGACGTGTTTCGGCGATTCTCGTTCGACAACATATGTAAGTTCTCTTTCGGATTGGACCCGGGATGTCTCGAGCCGTCTCTGCCCGCTTCGAAATTCGCGGATGCGTTTGACCTGGCGTCGAAGCTGTCGGCCGAGCGTGCGATGACGTCATCGCCGGTGCTTTGGAAAATCAAGCGGTTTTTCAACGCCGGCTCCGAAAAGCAGCTCAAGGAAGCAGTTACAATGATCGATGATTTGGCCAAAGAGATGATACGACAGCGTCGGGAAATGGGCTTTGGCGCCAAAAACGACCTCTTGTCGCGATTCATGGCCACCGTCGACGACGATAAGTACCTGAGAGACATAGTCGTCAGCTTTCTCCTTGCGGGCCGTGACACCATCTCGTCCGGGTTGACCAGCCTGTTCTATTTACTGTCCCAACACCCGGAAGTGACGCAGGCCATAAGGGAGGAGTCCGATCGGGTCATGGGTCGGGCCGGAGCAACCCCGAGCTTTGAACAGATGCGGGAAATGCATTACTTGCATGCAGTGCTTTACGAGACAATGAGGCTGTTCCCGCCGGTGCAATTCGATTCCAAGTTTTGTCAGGAAGACGATGTGTTACCTGATGGTACTTTTGTCAAGAGTGGCACTAGAGTTACCTACCATCCCTACGCAATGGGCAGGATGGAGAGCATTTGGGGACCCGATTGCCTCGATTTCAAGCCGGAGAGGTGGTTGAAGAACGGGATTTACTCACCGGAGAGCTCCTACAGGTACCCGGTTTTTCAGGCCGGGGAGAGGGTGTGCTTGGGCAAGGAGTTGGCTCTGGTGGAGATGAAATGCGTCGCCGTTGCCCTTATTAGGAGGTTCGATATTCAGGTTTCACAACCCGGTCAGGCCCCCCGGTTCGCGCCGGGTCTCACGGCCACCGTAAGAGGCGGGCTACCAGTTCGAGTTGAAGAAAGGGAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

497

Amino Acids

56.21

Weight (kDa)

7.57

Isoelectric Point (pI)

41.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 70 - 475 3e-67 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015247)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G27690
fragaria_vesca FvH4_3g24520
malus_domestica MD03G1140700.v1.1 MD11G1171100.v1.1
prunus_persica Prupe.6G126400_v2.0.a1
pyrus_communis pycom03g09580
rosa_chinensis RchiOBHm_Chr5g0043981
rosa_laevigata RLG00000034230
rosa_multiflora Rmu_sc0001157.1_g000001
rosa_roxburghii Rroxscaffold_1G00037050
rosa_rugosa Rorug05G0209600
rosa_samantha Rh5AG294000 Rh5BG302100 Rh5CG329400 Rh5DG311000
rosa_wichuraiana Rw5G027250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 884
AatII GACGTC 1 cut(s) 686
Acc65I GGTACC 1 cut(s) 1293
AccB1I GGYRCC 2 cut(s) 815, 1293
AccI GTMKAC 2 cut(s) 366, 855
AccII CGCG 5 cut(s) 351, 440, 635, 838, 1430
AclWI GGATC 3 cut(s) 322, 362, 537
AcoI YGGCCR 5 cut(s) 399, 666, 774, 846, 1443
AcsI RAATTY 1 cut(s) 629
AcvI CACGTG 1 cut(s) 378
AcyI GRCGYC 3 cut(s) 653, 683, 816
AfaI GTAC 4 cut(s) 185, 869, 1150, 1295
AfiI CCNNNNNNNGG 4 cut(s) 150, 961, 1317, 1380
AflIII ACRYGT 2 cut(s) 375, 540
AgsI TTSAA 6 cut(s) 361, 721, 1034, 1240, 1258, 1478
AhdI GACNNNNNGTC 2 cut(s) 652, 832
AjiI CACGTC 3 cut(s) 124, 232, 541
AjnI CCWGG 4 cut(s) 107, 287, 470, 648
AjuI GAANNNNNNNTTGG 2 cut(s) 795, 827
AluBI AGCT 7 cut(s) 150, 412, 661, 742, 891, 1029, 1284
AluI AGCT 7 cut(s) 150, 412, 661, 742, 891, 1029, 1284
Alw21I GWGCWC 3 cut(s) 276, 414, 1286
Alw26I GTCTC 6 cut(s) 210, 608, 618, 870, 1070, 1442
AlwI GGATC 3 cut(s) 322, 362, 537
Ama87I CYCGRG 5 cut(s) 145, 443, 595, 605, 1024
ApeKI GCWGC 3 cut(s) 417, 484, 739
ApoI RAATTY 1 cut(s) 629
Asp718I GGTACC 1 cut(s) 1293
AspLEI GCGC 4 cut(s) 393, 442, 818, 1432
AspS9I GGNCC 9 cut(s) 105, 153, 346, 432, 592, 904, 1011, 1220, 1417
AsuHPI GGTGA 2 cut(s) 46, 1266
AsuII TTCGAA 1 cut(s) 626
AvaI CYCGRG 5 cut(s) 145, 443, 595, 605, 1024
AvaII GGWCC 4 cut(s) 153, 432, 592, 1220
BaeI ACNNNNGTAYC 2 cut(s) 1140, 1173
BalI TGGCCA 3 cut(s) 401, 776, 848
BanI GGYRCC 2 cut(s) 815, 1293
BanII GRGCYC 2 cut(s) 414, 1286
BbrPI CACGTG 1 cut(s) 378
BbsI GAAGAC 1 cut(s) 1134
Bbv12I GWGCWC 3 cut(s) 276, 414, 1286
BbvCI CCTCAGC 1 cut(s) 197
BbvI GCAGC 3 cut(s) 429, 471, 751
BccI CCATC 6 cut(s) 198, 391, 923, 1139, 1191, 1198
BceAI ACGGC 7 cut(s) 301, 385, 532, 595, 891, 1352, 1458
BciT130I CCWGG 4 cut(s) 109, 289, 472, 650
BcoDI GTCTC 6 cut(s) 210, 608, 618, 870, 1070, 1442
BfaI CTAG 2 cut(s) 1170, 1492
BfmI CTRYAG 1 cut(s) 1288
BfoI RGCGCY 1 cut(s) 819
BisI GCNGC 6 cut(s) 349, 418, 456, 485, 520, 740
BlsI GCNGC 6 cut(s) 350, 419, 457, 486, 521, 741
Bme18I GGWCC 4 cut(s) 153, 432, 592, 1220
BmeRI GACNNNNNGTC 2 cut(s) 652, 832
BmeT110I CYCGRG 5 cut(s) 145, 443, 595, 605, 1024
BmgBI CACGTC 3 cut(s) 124, 232, 541
BmgT120I GGNCC 9 cut(s) 105, 153, 346, 432, 592, 904, 1011, 1220, 1417
BmsI GCATC 2 cut(s) 628, 1029
BpiI GAAGAC 1 cut(s) 1134
BplI GAGNNNNNCTC 4 cut(s) 190, 222, 452, 484
BpmI CTGGAG 2 cut(s) 428, 454
Bpu10I CCTNAGC 1 cut(s) 197
Bpu14I TTCGAA 1 cut(s) 626
BpuEI CTTGAG 1 cut(s) 728
Bsa29I ATCGAT 1 cut(s) 765
BsaAI YACGTR 1 cut(s) 378
BsaHI GRCGYC 3 cut(s) 653, 683, 816
BsaI GGTCTC 1 cut(s) 1442
BsaJI CCNNGG 8 cut(s) 107, 235, 331, 349, 492, 595, 1311, 1421
BsaWI WCCGGW 1 cut(s) 1276
BsaXI ACNNNNNCTCC 6 cut(s) 713, 743, 1238, 1268, 1307, 1337
Bsc4I CCNNNNNNNGG 4 cut(s) 150, 961, 1317, 1380
Bse118I RCCGGY 3 cut(s) 691, 725, 1096
Bse1I ACTGG 3 cut(s) 185, 402, 1466
Bse3DI GCAATG 1 cut(s) 1200
BseBI CCWGG 4 cut(s) 109, 289, 472, 650
BseCI ATCGAT 1 cut(s) 765
BseDI CCNNGG 8 cut(s) 107, 235, 331, 349, 492, 595, 1311, 1421
BseGI GGATG 5 cut(s) 276, 605, 643, 1183, 1209
BseLI CCNNNNNNNGG 4 cut(s) 150, 961, 1317, 1380
BseMI GCAATG 1 cut(s) 1200
BseMII CTCAG 2 cut(s) 188, 863
BseNI ACTGG 3 cut(s) 185, 402, 1466
BseRI GAGGAG 1 cut(s) 1001
BseX3I CGGCCG 1 cut(s) 666
BseXI GCAGC 3 cut(s) 429, 471, 751
Bsh1236I CGCG 5 cut(s) 351, 440, 635, 838, 1430
Bsh1285I CGRYCG 2 cut(s) 669, 997
BshNI GGYRCC 2 cut(s) 815, 1293
BshVI ATCGAT 1 cut(s) 765
BsiEI CGRYCG 2 cut(s) 669, 997
BsiHKAI GWGCWC 3 cut(s) 276, 414, 1286
BsiHKCI CYCGRG 5 cut(s) 145, 443, 595, 605, 1024
BslFI GGGAC 4 cut(s) 229, 418, 937, 1233
BslI CCNNNNNNNGG 4 cut(s) 150, 961, 1317, 1380
BsmAI GTCTC 6 cut(s) 210, 608, 618, 870, 1070, 1442
BsmBI CGTCTC 1 cut(s) 618
BsmFI GGGAC 4 cut(s) 229, 418, 937, 1233
Bso31I GGTCTC 1 cut(s) 1442
BsoBI CYCGRG 5 cut(s) 145, 443, 595, 605, 1024
Bsp119I TTCGAA 1 cut(s) 626
Bsp1286I GDGCHC 3 cut(s) 276, 414, 1286
Bsp143I GATC 6 cut(s) 327, 337, 354, 529, 762, 994
Bsp68I TCGCGA 1 cut(s) 838
BspCNI CTCAG 2 cut(s) 189, 864
BspDI ATCGAT 1 cut(s) 765
BspFNI CGCG 5 cut(s) 351, 440, 635, 838, 1430
BspPI GGATC 3 cut(s) 322, 362, 537
BspT104I TTCGAA 1 cut(s) 626
BspT107I GGYRCC 2 cut(s) 815, 1293
BspTNI GGTCTC 1 cut(s) 1442
BsrDI GCAATG 1 cut(s) 1200
BsrFI RCCGGY 3 cut(s) 691, 725, 1096
BsrI ACTGG 3 cut(s) 185, 402, 1466
BssAI RCCGGY 3 cut(s) 691, 725, 1096
BssECI CCNNGG 8 cut(s) 107, 235, 331, 349, 492, 595, 1311, 1421
BssMI GATC 6 cut(s) 327, 337, 354, 529, 762, 994
BssNI GRCGYC 3 cut(s) 653, 683, 816
Bst2UI CCWGG 4 cut(s) 109, 289, 472, 650
Bst4CI ACNGT 5 cut(s) 28, 325, 853, 951, 1450
Bst6I CTCTTC 2 cut(s) 47, 77
BstACI GRCGYC 3 cut(s) 653, 683, 816
BstAPI GCANNNNNTGC 2 cut(s) 1057, 1066
BstBAI YACGTR 1 cut(s) 378
BstBI TTCGAA 1 cut(s) 626
BstC8I GCNNGC 9 cut(s) 314, 489, 621, 675, 727, 904, 975, 1062, 1460
BstDEI CTNAG 2 cut(s) 197, 872
BstDSI CCRYGG 1 cut(s) 349
BstF5I GGATG 5 cut(s) 276, 605, 643, 1183, 1209
BstFNI CGCG 5 cut(s) 351, 440, 635, 838, 1430
BstH2I RGCGCY 1 cut(s) 819
BstHHI GCGC 4 cut(s) 393, 442, 818, 1432
BstKTI GATC 6 cut(s) 330, 340, 357, 532, 765, 997
BstMAI GTCTC 6 cut(s) 210, 608, 618, 870, 1070, 1442
BstMBI GATC 6 cut(s) 327, 337, 354, 529, 762, 994
BstMCI CGRYCG 2 cut(s) 669, 997
BstMWI GCNNNNNNNGC 9 cut(s) 126, 388, 481, 616, 674, 1048, 1057, 1066, 1093
BstNI CCWGG 4 cut(s) 109, 289, 472, 650
BstNSI RCATGY 1 cut(s) 1064
BstSFI CTRYAG 1 cut(s) 1288
BstUI CGCG 5 cut(s) 351, 440, 635, 838, 1430
BstV1I GCAGC 3 cut(s) 429, 471, 751
BstV2I GAAGAC 1 cut(s) 1134
BstX2I RGATCY 2 cut(s) 354, 529
BstYI RGATCY 2 cut(s) 354, 529
BstZI CGGCCG 1 cut(s) 666
Bsu15I ATCGAT 1 cut(s) 765
BsuTUI ATCGAT 1 cut(s) 765
BtgI CCRYGG 1 cut(s) 349
BtgZI GCGATG 2 cut(s) 672, 692
BtrI CACGTC 3 cut(s) 124, 232, 541
BtsCI GGATG 5 cut(s) 276, 605, 643, 1183, 1209
BtsI GCAGTG 1 cut(s) 1071
BtsIMutI CAGTG 2 cut(s) 321, 1071
BtuMI TCGCGA 1 cut(s) 838
Cac8I GCNNGC 9 cut(s) 314, 489, 621, 675, 727, 904, 975, 1062, 1460
CfoI GCGC 4 cut(s) 393, 442, 818, 1432
Cfr10I RCCGGY 3 cut(s) 691, 725, 1096
Cfr13I GGNCC 9 cut(s) 105, 153, 346, 432, 592, 904, 1011, 1220, 1417
Cfr42I CCGCGG 1 cut(s) 352
Cfr9I CCCGGG 1 cut(s) 595
ClaI ATCGAT 1 cut(s) 765
CseI GACGC 4 cut(s) 642, 785, 979, 1351
CsiI ACCWGGT 1 cut(s) 287
Csp6I GTAC 4 cut(s) 184, 868, 1149, 1294
CviAII CATG 3 cut(s) 844, 1003, 1061
CviQI GTAC 4 cut(s) 184, 868, 1149, 1294
DdeI CTNAG 2 cut(s) 197, 872
DinI GGCGCC 1 cut(s) 817
DpnI GATC 6 cut(s) 329, 339, 356, 531, 764, 996
DpnII GATC 6 cut(s) 327, 337, 354, 529, 762, 994
DrdI GACNNNNNNGTC 1 cut(s) 884
DriI GACNNNNNGTC 2 cut(s) 652, 832
DseDI GACNNNNNNGTC 1 cut(s) 884
EaeI YGGCCR 5 cut(s) 399, 666, 774, 846, 1443
EagI CGGCCG 1 cut(s) 666
Eam1104I CTCTTC 2 cut(s) 47, 77
Eam1105I GACNNNNNGTC 2 cut(s) 652, 832
EarI CTCTTC 2 cut(s) 47, 77
Ecl136II GAGCTC 2 cut(s) 412, 1284
EclXI CGGCCG 1 cut(s) 666
Eco24I GRGCYC 2 cut(s) 414, 1286
Eco31I GGTCTC 1 cut(s) 1442
Eco47I GGWCC 4 cut(s) 153, 432, 592, 1220
Eco52I CGGCCG 1 cut(s) 666
Eco53kI GAGCTC 2 cut(s) 412, 1284
Eco72I CACGTG 1 cut(s) 378
Eco88I CYCGRG 5 cut(s) 145, 443, 595, 605, 1024
EcoICRI GAGCTC 2 cut(s) 412, 1284
EcoO109I RGGNCCY 2 cut(s) 1220, 1417
EcoRII CCWGG 4 cut(s) 107, 287, 470, 648
EcoT22I ATGCAT 1 cut(s) 1053
EcoT38I GRGCYC 2 cut(s) 414, 1286
EgeI GGCGCC 1 cut(s) 817
EheI GGCGCC 1 cut(s) 817
Esp3I CGTCTC 1 cut(s) 618
FaeI CATG 3 cut(s) 847, 1006, 1064
FaiI YATR 7 cut(s) 569, 571, 845, 881, 980, 1004, 1062
FaqI GGGAC 4 cut(s) 229, 418, 937, 1233
FatI CATG 3 cut(s) 843, 1002, 1060
FauI CCCGC 6 cut(s) 344, 628, 895, 1035, 1101, 1451
FauNDI CATATG 1 cut(s) 569
FblI GTMKAC 2 cut(s) 366, 855
Fnu4HI GCNGC 6 cut(s) 349, 418, 456, 485, 520, 740
FokI GGATG 5 cut(s) 263, 612, 650, 1170, 1216
FriOI GRGCYC 2 cut(s) 414, 1286
Fsp4HI GCNGC 6 cut(s) 349, 418, 456, 485, 520, 740
FspBI CTAG 2 cut(s) 1170, 1492
GlaI GCGC 4 cut(s) 392, 441, 817, 1431
GluI GCNGC 6 cut(s) 349, 418, 456, 485, 520, 740
GsuI CTGGAG 2 cut(s) 428, 454
HaeII RGCGCY 1 cut(s) 819
HgaI GACGC 4 cut(s) 642, 785, 979, 1351
HhaI GCGC 4 cut(s) 393, 442, 818, 1432
Hin1I GRCGYC 3 cut(s) 653, 683, 816
Hin1II CATG 3 cut(s) 847, 1006, 1064
Hin6I GCGC 4 cut(s) 391, 440, 816, 1430
HinP1I GCGC 4 cut(s) 391, 440, 816, 1430
HincII GTYRAC 3 cut(s) 367, 856, 930
HindII GTYRAC 3 cut(s) 367, 856, 930
HinfI GANTC 8 cut(s) 14, 463, 478, 509, 552, 840, 989, 1109
HphI GGTGA 2 cut(s) 46, 1266
Hpy166II GTNNAC 5 cut(s) 186, 321, 367, 856, 930
Hpy188I TCNGA 4 cut(s) 210, 587, 733, 994
Hpy188III TCNNGA 7 cut(s) 139, 407, 605, 800, 837, 1124, 1159
Hpy8I GTNNAC 5 cut(s) 186, 321, 367, 856, 930
HpyAV CCTTC 3 cut(s) 61, 499, 1481
HpyCH4III ACNGT 5 cut(s) 28, 325, 853, 951, 1450
HpyCH4IV ACGT 7 cut(s) 123, 231, 267, 363, 377, 540, 683
HpyCH4V TGCA 6 cut(s) 114, 535, 1051, 1060, 1064, 1102
HpyF10VI GCNNNNNNNGC 9 cut(s) 126, 388, 481, 616, 674, 1048, 1057, 1066, 1093
HpyF3I CTNAG 2 cut(s) 197, 872
HpySE526I ACGT 7 cut(s) 123, 231, 267, 363, 377, 540, 683
Hsp92I GRCGYC 3 cut(s) 653, 683, 816
Hsp92II CATG 3 cut(s) 847, 1006, 1064
HspAI GCGC 4 cut(s) 391, 440, 816, 1430
KasI GGCGCC 1 cut(s) 815
KflI GGGWCCC 1 cut(s) 1220
KpnI GGTACC 1 cut(s) 1297
KroI GCCGGC 1 cut(s) 725
KroNI GCCGGC 1 cut(s) 727
KspI CCGCGG 1 cut(s) 352
Kzo9I GATC 6 cut(s) 327, 337, 354, 529, 762, 994
LmnI GCTCC 6 cut(s) 105, 271, 409, 734, 1016, 1289
Lsp1109I GCAGC 3 cut(s) 429, 471, 751
LweI GCATC 2 cut(s) 628, 1029
MabI ACCWGGT 1 cut(s) 287
MaeI CTAG 2 cut(s) 1170, 1492
MaeII ACGT 7 cut(s) 123, 231, 267, 363, 377, 540, 683
MaeIII GTNAC 7 cut(s) 176, 247, 754, 908, 967, 1137, 1174
MalI GATC 6 cut(s) 329, 339, 356, 531, 764, 996
MboI GATC 6 cut(s) 327, 337, 354, 529, 762, 994
MboII GAAGA 7 cut(s) 34, 37, 64, 349, 1139, 1270, 1490
MflI RGATCY 2 cut(s) 354, 529
MhlI GDGCHC 3 cut(s) 276, 414, 1286
MlsI TGGCCA 3 cut(s) 401, 776, 848
MluCI AATT 2 cut(s) 629, 1103
MluNI TGGCCA 3 cut(s) 401, 776, 848
Mly113I GGCGCC 1 cut(s) 816
MlyI GAGTC 2 cut(s) 518, 998
MmeI TCCRAC 2 cut(s) 233, 279
Mox20I TGGCCA 3 cut(s) 401, 776, 848
Mph1103I ATGCAT 1 cut(s) 1053
MroNI GCCGGC 1 cut(s) 725
MscI TGGCCA 3 cut(s) 401, 776, 848
Msp20I TGGCCA 3 cut(s) 401, 776, 848
MspA1I CMGCKG 2 cut(s) 351, 484
MvaI CCWGG 4 cut(s) 109, 289, 472, 650
MvnI CGCG 5 cut(s) 351, 440, 635, 838, 1430
MwoI GCNNNNNNNGC 9 cut(s) 126, 388, 481, 616, 674, 1048, 1057, 1066, 1093
NaeI GCCGGC 1 cut(s) 727
NarI GGCGCC 1 cut(s) 816
NdeI CATATG 1 cut(s) 569
NdeII GATC 6 cut(s) 327, 337, 354, 529, 762, 994
NgoMIV GCCGGC 1 cut(s) 725
NlaIII CATG 3 cut(s) 847, 1006, 1064
NmeAIII GCCGAG 5 cut(s) 216, 312, 393, 484, 694
NmuCI GTSAC 4 cut(s) 176, 247, 908, 967
NruI TCGCGA 1 cut(s) 838
NsiI ATGCAT 1 cut(s) 1053
NspI RCATGY 1 cut(s) 1064
NspV TTCGAA 1 cut(s) 626
PaeI GCATGC 1 cut(s) 1064
PaeR7I CTCGAG 3 cut(s) 145, 443, 605
PcsI WCGNNNNNNNCGW 4 cut(s) 243, 369, 456, 729
PdiI GCCGGC 1 cut(s) 727
PfeI GAWTC 6 cut(s) 14, 463, 478, 552, 840, 1109
PflFI GACNNNGTC 2 cut(s) 795, 881
PfoI TCCNGGA 1 cut(s) 500
PkrI GCNGC 6 cut(s) 350, 419, 457, 486, 521, 741
Ple19I CGATCG 1 cut(s) 997
PleI GAGTC 2 cut(s) 517, 997
PluTI GGCGCC 1 cut(s) 819
PmaCI CACGTG 1 cut(s) 378
PmlI CACGTG 1 cut(s) 378
PpsI GAGTC 2 cut(s) 517, 997
Ppu21I YACGTR 1 cut(s) 378
PpuMI RGGWCCY 1 cut(s) 1220
Psp124BI GAGCTC 2 cut(s) 414, 1286
Psp5II RGGWCCY 1 cut(s) 1220
Psp6I CCWGG 4 cut(s) 107, 287, 470, 648
PspCI CACGTG 1 cut(s) 378
PspGI CCWGG 4 cut(s) 107, 287, 470, 648
PspPI GGNCC 9 cut(s) 105, 153, 346, 432, 592, 904, 1011, 1220, 1417
PspPPI RGGWCCY 1 cut(s) 1220
PspXI VCTCGAGB 2 cut(s) 145, 443
PsrI GAACNNNNNNTAC 2 cut(s) 1253, 1285
PsuI RGATCY 2 cut(s) 354, 529
PsyI GACNNNGTC 2 cut(s) 795, 881
PvuI CGATCG 1 cut(s) 997
RruI TCGCGA 1 cut(s) 838
RsaI GTAC 4 cut(s) 185, 869, 1150, 1295
RsaNI GTAC 4 cut(s) 184, 868, 1149, 1294
SacI GAGCTC 2 cut(s) 414, 1286
SacII CCGCGG 1 cut(s) 352
SalI GTCGAC 2 cut(s) 365, 854
SatI GCNGC 6 cut(s) 349, 418, 456, 485, 520, 740
Sau3AI GATC 6 cut(s) 327, 337, 354, 529, 762, 994
Sau96I GGNCC 9 cut(s) 105, 153, 346, 432, 592, 904, 1011, 1220, 1417
SchI GAGTC 2 cut(s) 518, 998
SduI GDGCHC 3 cut(s) 276, 414, 1286
SexAI ACCWGGT 1 cut(s) 287
SfaNI GCATC 2 cut(s) 628, 1029
SfcI CTRYAG 1 cut(s) 1288
SfoI GGCGCC 1 cut(s) 817
Sfr274I CTCGAG 3 cut(s) 145, 443, 605
Sfr303I CCGCGG 1 cut(s) 352
SfuI TTCGAA 1 cut(s) 626
SgrAI CRCCGGYG 2 cut(s) 691, 1096
SgrBI CCGCGG 1 cut(s) 352
SgrDI CGTCGACG 2 cut(s) 365, 854
SinI GGWCC 4 cut(s) 153, 432, 592, 1220
SlaI CTCGAG 3 cut(s) 145, 443, 605
SmaI CCCGGG 1 cut(s) 597
SmlI CTYRAG 4 cut(s) 145, 443, 605, 743
SmoI CTYRAG 4 cut(s) 145, 443, 605, 743
SphI GCATGC 1 cut(s) 1064
Sse9I AATT 2 cut(s) 629, 1103
SspDI GGCGCC 1 cut(s) 815
SspMI CTAG 2 cut(s) 1170, 1492
SstI GAGCTC 2 cut(s) 414, 1286
TaaI ACNGT 5 cut(s) 28, 325, 853, 951, 1450
TaiI ACGT 7 cut(s) 126, 234, 270, 366, 380, 543, 686
TaqII GACCGA 1 cut(s) 420
TasI AATT 2 cut(s) 629, 1103
TauI GCSGC 3 cut(s) 351, 458, 522
TfiI GAWTC 6 cut(s) 14, 463, 478, 552, 840, 1109
TscAI CASTG 2 cut(s) 328, 1071
TseFI GTSAC 4 cut(s) 176, 247, 908, 967
TseI GCWGC 3 cut(s) 417, 484, 739
Tsp45I GTSAC 4 cut(s) 176, 247, 908, 967
TspDTI ATGAA 2 cut(s) 832, 1370
TspGWI ACGGA 1 cut(s) 415
TspMI CCCGGG 1 cut(s) 595
TspRI CASTG 2 cut(s) 328, 1071
Tth111I GACNNNGTC 2 cut(s) 795, 881
VpaK11BI GGWCC 4 cut(s) 153, 432, 592, 1220
XapI RAATTY 1 cut(s) 629
XceI RCATGY 1 cut(s) 1064
XhoI CTCGAG 3 cut(s) 145, 443, 605
XmaI CCCGGG 1 cut(s) 595
XmiI GTMKAC 2 cut(s) 366, 855
XspI CTAG 2 cut(s) 1170, 1492
ZraI GACGTC 1 cut(s) 684
Zsp2I ATGCAT 1 cut(s) 1053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.