RchiOBHm_Chr5g0051521

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
52783698 .. 52785036
1339 bp
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UTR
Exon/CDS
Intron
PRQ32899

Sequence Viewer

Length: 135 bp
ATGTTTGATAATTATTTGTTTATGTACAGGGCTTCCGCAGTTTTTGTTGGAGTTTATGAACCTACAAAGCAGAAATTGTTAGAGATGTTTCCTGAAAATCTAAGCGCTTTAGCTCATTTTTTTGAAGGTCTTTGA

Protein Analysis

44

Amino Acids

5.17

Weight (kDa)

4.96

Isoelectric Point (pI)

20.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030296)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0051521
rosa_samantha Rh2BG279600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 36
AfaI GTAC 1 cut(s) 26
AfeI AGCGCT 1 cut(s) 106
AgsI TTSAA 1 cut(s) 125
AluBI AGCT 1 cut(s) 113
AluI AGCT 1 cut(s) 113
Aor51HI AGCGCT 1 cut(s) 106
AspLEI GCGC 1 cut(s) 107
BfoI RGCGCY 1 cut(s) 108
Bsp1407I TGTACA 1 cut(s) 24
BspACI CCGC 1 cut(s) 36
BsrGI TGTACA 1 cut(s) 24
BstAUI TGTACA 1 cut(s) 24
BstDEI CTNAG 1 cut(s) 101
BstH2I RGCGCY 1 cut(s) 108
BstHHI GCGC 1 cut(s) 107
CfoI GCGC 1 cut(s) 107
Csp6I GTAC 1 cut(s) 25
CviJI RGCY 2 cut(s) 32, 113
CviKI_1 RGCY 2 cut(s) 32, 113
CviQI GTAC 1 cut(s) 25
DdeI CTNAG 1 cut(s) 101
Eco47III AGCGCT 1 cut(s) 106
FaiI YATR 2 cut(s) 23, 57
FspEI CC 7 cut(s) 13, 14, 33, 49, 75, 105, 111
GlaI GCGC 1 cut(s) 106
HaeII RGCGCY 1 cut(s) 108
HhaI GCGC 1 cut(s) 107
Hin6I GCGC 1 cut(s) 105
HinP1I GCGC 1 cut(s) 105
Hpy188III TCNNGA 1 cut(s) 92
HpyAV CCTTC 1 cut(s) 119
HpyF3I CTNAG 1 cut(s) 101
HspAI GCGC 1 cut(s) 105
LpnPI CCDG 2 cut(s) 13, 105
MluCI AATT 2 cut(s) 10, 74
MmeI TCCRAC 1 cut(s) 28
RsaI GTAC 1 cut(s) 26
RsaNI GTAC 1 cut(s) 25
SetI ASST 3 cut(s) 64, 115, 130
SgeI CNNG 2 cut(s) 40, 104
Sse9I AATT 2 cut(s) 10, 74
SsiI CCGC 1 cut(s) 36
TasI AATT 2 cut(s) 10, 74
TatI WGTACW 1 cut(s) 24
TspDTI ATGAA 1 cut(s) 72
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.