RchiOBHm_Chr6g0257171

palmitoyl-(protein) hydrolase activity

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
12441388 .. 12443247
1860 bp
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UTR
Exon/CDS
Intron
PRQ23067

Sequence Viewer

Length: 207 bp
ATGCAGATTTTTACGGGTTTTTGGTGGTTTAGGGCTCACGGGTTGTTCTACTATTTGAAAGGTGGGCAGGTTGATTATGGTGAAGAACGCAGCATAGCCTATAGGCATTCCCAAGTTTGGTTCTCTTTTTCCTCATGTTTTAATGTTCTCTTGTTTGATAAAAGAGCAAGAAATGAGATTGCTTTCATAATAGACCTCATATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

68

Amino Acids

8.18

Weight (kDa)

7.93

Isoelectric Point (pI)

35.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0025086)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0257171
rosa_rugosa Rorug05G0574400
rosa_samantha Rh6AG092300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 58
AfiI CCNNNNNNNGG 1 cut(s) 117
AgsI TTSAA 1 cut(s) 58
ApeKI GCWGC 1 cut(s) 90
AsuHPI GGTGA 1 cut(s) 92
BanII GRGCYC 1 cut(s) 37
BbvI GCAGC 1 cut(s) 102
BfmI CTRYAG 1 cut(s) 100
BfuAI ACCTGC 1 cut(s) 58
BisI GCNGC 1 cut(s) 91
BlsI GCNGC 1 cut(s) 92
Bsc4I CCNNNNNNNGG 1 cut(s) 117
BseLI CCNNNNNNNGG 1 cut(s) 117
BseXI GCAGC 1 cut(s) 102
BslI CCNNNNNNNGG 1 cut(s) 117
BsmI GAATGC 1 cut(s) 106
Bsp1286I GDGCHC 1 cut(s) 37
BspMI ACCTGC 1 cut(s) 58
BstSFI CTRYAG 1 cut(s) 100
BstV1I GCAGC 1 cut(s) 102
BveI ACCTGC 1 cut(s) 58
CviAII CATG 1 cut(s) 135
CviJI RGCY 2 cut(s) 35, 98
CviKI_1 RGCY 2 cut(s) 35, 98
Eco24I GRGCYC 1 cut(s) 37
EcoT38I GRGCYC 1 cut(s) 37
FaeI CATG 1 cut(s) 138
FaiI YATR 7 cut(s) 78, 95, 102, 136, 188, 200, 205
FatI CATG 1 cut(s) 134
Fnu4HI GCNGC 1 cut(s) 91
FriOI GRGCYC 1 cut(s) 37
Fsp4HI GCNGC 1 cut(s) 91
GluI GCNGC 1 cut(s) 91
Hin1II CATG 1 cut(s) 138
HphI GGTGA 1 cut(s) 92
HpyCH4V TGCA 1 cut(s) 4
Hsp92II CATG 1 cut(s) 138
LpnPI CCDG 1 cut(s) 53
Lsp1109I GCAGC 1 cut(s) 102
MboII GAAGA 1 cut(s) 95
MhlI GDGCHC 1 cut(s) 37
MnlI CCTC 2 cut(s) 142, 206
MseI TTAA 1 cut(s) 141
Mva1269I GAATGC 1 cut(s) 106
NlaIII CATG 1 cut(s) 138
PctI GAATGC 1 cut(s) 106
PkrI GCNGC 1 cut(s) 92
SaqAI TTAA 1 cut(s) 141
SatI GCNGC 1 cut(s) 91
SduI GDGCHC 1 cut(s) 37
SetI ASST 3 cut(s) 64, 72, 198
SfcI CTRYAG 1 cut(s) 100
SgeI CNNG 8 cut(s) 27, 50, 52, 80, 125, 147, 163, 180
Tru1I TTAA 1 cut(s) 141
Tru9I TTAA 1 cut(s) 141
TseI GCWGC 1 cut(s) 90
TspDTI ATGAA 1 cut(s) 175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.