RchiOBHm_Chr6g0272501

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
32851296 .. 32852262
967 bp
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UTR
Exon/CDS
Intron
PRQ24446

Sequence Viewer

Length: 354 bp
ATGGTTTTGCAATCTGGTATGTACTCGTTTAGGCTAATTAAGAATGAGAATCTGACTATGTTGTGGAACGATAGTATTGTGTATTGGAATCAAGGTTTGAACTCATCCGTTACTAACAATACCCCCAATTTAACTTCACCCACTTTAGGAGTGCAACCTATTGGTATTTTGACCATTTCTGATCCAAAGTTGGCCACTGTGGCTATTGTTTCTCATAGTAATGATTATGCTGAGGCTGGTGATATTTTGAGGTTCTTCAAGCTAGAGGGTGATGAGAATGTGAGGATTTATAGCTCTACTAAAGGTAGTGGGAGTACAATTGAGAGTTGGGCAGTTGTTACTGATCAGTGTTAG

Protein Analysis

117

Amino Acids

12.86

Weight (kDa)

4.68

Isoelectric Point (pI)

31.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029267)

Species Orthologous Gene IDs
pyrus_communis pycom05g03210
rosa_chinensis RchiOBHm_Chr6g0272501

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 176
AcoI YGGCCR 1 cut(s) 192
AfaI GTAC 2 cut(s) 23, 316
AfiI CCNNNNNNNGG 1 cut(s) 146
AgsI TTSAA 2 cut(s) 100, 259
AluBI AGCT 2 cut(s) 262, 294
AluI AGCT 2 cut(s) 262, 294
AlwI GGATC 1 cut(s) 176
AoxI GGCC 1 cut(s) 192
AsuHPI GGTGA 3 cut(s) 129, 251, 281
BalI TGGCCA 1 cut(s) 194
BbvCI CCTCAGC 1 cut(s) 231
BclI TGATCA 1 cut(s) 343
BfaI CTAG 1 cut(s) 263
BglI GCCNNNNNGGC 1 cut(s) 200
Bpu10I CCTNAGC 1 cut(s) 231
Bsc4I CCNNNNNNNGG 1 cut(s) 146
BseGI GGATG 1 cut(s) 104
BseLI CCNNNNNNNGG 1 cut(s) 146
BseMII CTCAG 1 cut(s) 222
BshFI GGCC 1 cut(s) 194
BslI CCNNNNNNNGG 1 cut(s) 146
BsnI GGCC 1 cut(s) 194
Bsp143I GATC 2 cut(s) 181, 343
BspANI GGCC 1 cut(s) 194
BspCNI CTCAG 1 cut(s) 223
BspPI GGATC 1 cut(s) 176
BssMI GATC 2 cut(s) 181, 343
Bst4CI ACNGT 1 cut(s) 199
BstDEI CTNAG 1 cut(s) 231
BstF5I GGATG 1 cut(s) 104
BstKTI GATC 2 cut(s) 184, 346
BstMBI GATC 2 cut(s) 181, 343
BstMWI GCNNNNNNNGC 1 cut(s) 200
BsuRI GGCC 1 cut(s) 194
BtsCI GGATG 1 cut(s) 104
BtsIMutI CAGTG 2 cut(s) 195, 353
Csp6I GTAC 2 cut(s) 22, 315
CviJI RGCY 6 cut(s) 34, 194, 203, 236, 262, 294
CviKI_1 RGCY 6 cut(s) 34, 194, 203, 236, 262, 294
CviQI GTAC 2 cut(s) 22, 315
DdeI CTNAG 1 cut(s) 231
DpnI GATC 2 cut(s) 183, 345
DpnII GATC 2 cut(s) 181, 343
EaeI YGGCCR 1 cut(s) 192
FaiI YATR 5 cut(s) 20, 59, 216, 228, 291
FbaI TGATCA 1 cut(s) 343
FokI GGATG 1 cut(s) 91
FspBI CTAG 1 cut(s) 263
HaeIII GGCC 1 cut(s) 194
HinfI GANTC 2 cut(s) 49, 88
HphI GGTGA 3 cut(s) 129, 251, 281
Hpy188I TCNGA 2 cut(s) 54, 181
HpyCH4III ACNGT 1 cut(s) 199
HpyCH4V TGCA 2 cut(s) 10, 154
HpyF10VI GCNNNNNNNGC 1 cut(s) 200
HpyF3I CTNAG 1 cut(s) 231
Ksp22I TGATCA 1 cut(s) 343
Kzo9I GATC 2 cut(s) 181, 343
LpnPI CCDG 1 cut(s) 222
MaeI CTAG 1 cut(s) 263
MaeIII GTNAC 2 cut(s) 109, 337
MalI GATC 2 cut(s) 183, 345
MboI GATC 2 cut(s) 181, 343
MboII GAAGA 1 cut(s) 247
MfeI CAATTG 1 cut(s) 318
MlsI TGGCCA 1 cut(s) 194
MluCI AATT 3 cut(s) 36, 127, 318
MluNI TGGCCA 1 cut(s) 194
MnlI CCTC 4 cut(s) 226, 243, 259, 276
Mox20I TGGCCA 1 cut(s) 194
MscI TGGCCA 1 cut(s) 194
MseI TTAA 2 cut(s) 39, 131
MslI CAYNNNNRTG 1 cut(s) 219
Msp20I TGGCCA 1 cut(s) 194
MunI CAATTG 1 cut(s) 318
MwoI GCNNNNNNNGC 1 cut(s) 200
NdeII GATC 2 cut(s) 181, 343
PfeI GAWTC 2 cut(s) 49, 88
RsaI GTAC 2 cut(s) 23, 316
RsaNI GTAC 2 cut(s) 22, 315
RseI CAYNNNNRTG 1 cut(s) 219
SaqAI TTAA 2 cut(s) 39, 131
Sau3AI GATC 2 cut(s) 181, 343
SetI ASST 6 cut(s) 97, 160, 254, 264, 296, 307
SgeI CNNG 6 cut(s) 27, 37, 104, 249, 271, 275
SmiMI CAYNNNNRTG 1 cut(s) 219
Sse9I AATT 3 cut(s) 36, 127, 318
SspMI CTAG 1 cut(s) 263
TaaI ACNGT 1 cut(s) 199
TasI AATT 3 cut(s) 36, 127, 318
TatI WGTACW 2 cut(s) 21, 314
TfiI GAWTC 2 cut(s) 49, 88
Tru1I TTAA 2 cut(s) 39, 131
Tru9I TTAA 2 cut(s) 39, 131
TscAI CASTG 2 cut(s) 202, 353
TspGWI ACGGA 1 cut(s) 97
TspRI CASTG 2 cut(s) 202, 353
XspI CTAG 1 cut(s) 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.