RchiOBHm_Chr6g0283591

Protein of unknown function (DUF760)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0030339
Physical Location & Seq
Forward (+)
46831951 .. 46833424
1474 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25429

Sequence Viewer

Length: 468 bp
ATGTTCATGACCCTAATCTCCTCCTGTACCCACTCAGCCCTATCCACCTTTTCCTCTTCTTCACCACCTTTTCTCTTCACTCTGCAACCAAATTTCAACAGAAGCCAAAATCACATGGAACATTGTCTCTCCCACCACAAGCTCCTCGCTCTTCCGTCCCCGCTCTCCACCTTGAAGCCGAGATTAGCGCTCAATTTCGCGCCCAAATCCCAGGCGTTGACCAGGCGGTTGACTGTGGTAGCCGGCGCCGGGGCGTCGAGCCACTGCGAGTTCAGCAGCCTCAACTCGCCGCTCGACCCGAGGACCCGATCCGGCAAGGACCTCAGCTCCGTTTTGCAGAACCACCCGCAGCTGTTTCACTTGGCCGTCGCTCAGGAGCTCAAGCAGTTGGCCGATCAGCGACAGGACGCGCGATGTCGTATGTATCTCAGCGCTTCGTCTCATGAGGCCTGCCTTCATAGGCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF760

Protein Analysis

155

Amino Acids

17.21

Weight (kDa)

9.86

Isoelectric Point (pI)

67.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0030339)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0283591
rosa_multiflora Rmu_co8177510.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 245
AccBSI CCGCTC 2 cut(s) 163, 292
AccII CGCG 3 cut(s) 200, 410, 412
AciI CCGC 5 cut(s) 161, 226, 290, 347, 463
AclWI GGATC 1 cut(s) 303
AcoI YGGCCR 2 cut(s) 363, 390
AcsI RAATTY 1 cut(s) 91
AcyI GRCGYC 2 cut(s) 246, 254
AfaI GTAC 1 cut(s) 28
AfeI AGCGCT 2 cut(s) 189, 433
AfiI CCNNNNNNNGG 1 cut(s) 249
AgsI TTSAA 2 cut(s) 97, 175
AjnI CCWGG 2 cut(s) 210, 221
AluBI AGCT 4 cut(s) 142, 327, 352, 379
AluI AGCT 4 cut(s) 142, 327, 352, 379
Alw21I GWGCWC 1 cut(s) 381
Alw26I GTCTC 2 cut(s) 131, 444
AlwI GGATC 1 cut(s) 303
Ama87I CYCGRG 1 cut(s) 298
Aor51HI AGCGCT 2 cut(s) 189, 433
AoxI GGCC 3 cut(s) 363, 390, 447
ApeKI GCWGC 2 cut(s) 276, 349
ApoI RAATTY 1 cut(s) 91
AspLEI GCGC 5 cut(s) 190, 202, 248, 412, 434
AspS9I GGNCC 2 cut(s) 303, 319
AsuC2I CCSGG 1 cut(s) 250
AsuHPI GGTGA 1 cut(s) 54
AvaI CYCGRG 1 cut(s) 298
AvaII GGWCC 2 cut(s) 303, 319
BanI GGYRCC 1 cut(s) 245
BanII GRGCYC 1 cut(s) 381
Bbv12I GWGCWC 1 cut(s) 381
BbvCI CCTCAGC 1 cut(s) 323
BbvI GCAGC 2 cut(s) 288, 361
BceAI ACGGC 1 cut(s) 350
BciT130I CCWGG 2 cut(s) 212, 223
BcnI CCSGG 1 cut(s) 250
BcoDI GTCTC 2 cut(s) 131, 444
BfoI RGCGCY 3 cut(s) 191, 249, 435
BisI GCNGC 3 cut(s) 277, 290, 350
BlsI GCNGC 3 cut(s) 278, 291, 351
Bme1390I CCNGG 3 cut(s) 212, 223, 250
Bme18I GGWCC 2 cut(s) 303, 319
BmeT110I CYCGRG 1 cut(s) 298
BmgT120I GGNCC 2 cut(s) 303, 319
BmiI GGNNCC 2 cut(s) 247, 305
BmrFI CCNGG 3 cut(s) 212, 223, 250
Bpu10I CCTNAGC 2 cut(s) 323, 372
BpuEI CTTGAG 1 cut(s) 365
BpuMI CCSGG 1 cut(s) 250
BsaHI GRCGYC 2 cut(s) 246, 254
BsaJI CCNNGG 3 cut(s) 210, 249, 299
BsaXI ACNNNNNCTCC 2 cut(s) 311, 341
Bsc4I CCNNNNNNNGG 1 cut(s) 249
Bse118I RCCGGY 1 cut(s) 242
BseBI CCWGG 2 cut(s) 212, 223
BseDI CCNNGG 3 cut(s) 210, 249, 299
BseLI CCNNNNNNNGG 1 cut(s) 249
BseMII CTCAG 4 cut(s) 48, 337, 386, 442
BseRI GAGGAG 2 cut(s) 10, 134
BseXI GCAGC 2 cut(s) 288, 361
Bsh1236I CGCG 3 cut(s) 200, 410, 412
BshFI GGCC 3 cut(s) 365, 392, 449
BshNI GGYRCC 1 cut(s) 245
BsiHKAI GWGCWC 1 cut(s) 381
BsiHKCI CYCGRG 1 cut(s) 298
BsiSI CCGG 3 cut(s) 243, 249, 312
BslFI GGGAC 1 cut(s) 142
BslI CCNNNNNNNGG 1 cut(s) 249
BsmAI GTCTC 2 cut(s) 131, 444
BsmBI CGTCTC 1 cut(s) 444
BsmFI GGGAC 1 cut(s) 142
BsnI GGCC 3 cut(s) 365, 392, 449
BsoBI CYCGRG 1 cut(s) 298
Bsp1286I GDGCHC 1 cut(s) 381
Bsp143I GATC 2 cut(s) 308, 394
BspACI CCGC 5 cut(s) 161, 226, 290, 347, 463
BspANI GGCC 3 cut(s) 365, 392, 449
BspCNI CTCAG 4 cut(s) 47, 336, 385, 441
BspFNI CGCG 3 cut(s) 200, 410, 412
BspHI TCATGA 2 cut(s) 6, 442
BspLI GGNNCC 2 cut(s) 247, 305
BspPI GGATC 1 cut(s) 303
BspQI GCTCTTC 1 cut(s) 156
BspT107I GGYRCC 1 cut(s) 245
BsrBI CCGCTC 2 cut(s) 163, 292
BsrFI RCCGGY 1 cut(s) 242
BssAI RCCGGY 1 cut(s) 242
BssECI CCNNGG 3 cut(s) 210, 249, 299
BssMI GATC 2 cut(s) 308, 394
BssNI GRCGYC 2 cut(s) 246, 254
Bst2UI CCWGG 2 cut(s) 212, 223
Bst4CI ACNGT 1 cut(s) 235
Bst6I CTCTTC 3 cut(s) 61, 80, 156
BstACI GRCGYC 2 cut(s) 246, 254
BstC8I GCNNGC 2 cut(s) 244, 451
BstDEI CTNAG 4 cut(s) 34, 323, 372, 428
BstFNI CGCG 3 cut(s) 200, 410, 412
BstH2I RGCGCY 3 cut(s) 191, 249, 435
BstHHI GCGC 5 cut(s) 190, 202, 248, 412, 434
BstKTI GATC 2 cut(s) 311, 397
BstMAI GTCTC 2 cut(s) 131, 444
BstMBI GATC 2 cut(s) 308, 394
BstMWI GCNNNNNNNGC 1 cut(s) 273
BstNI CCWGG 2 cut(s) 212, 223
BstSCI CCNGG 3 cut(s) 210, 221, 248
BstUI CGCG 3 cut(s) 200, 410, 412
BstV1I GCAGC 2 cut(s) 288, 361
BsuRI GGCC 3 cut(s) 365, 392, 449
BtgZI GCGATG 1 cut(s) 427
BtsI GCAGTG 1 cut(s) 262
BtsIMutI CAGTG 1 cut(s) 262
Cac8I GCNNGC 2 cut(s) 244, 451
CciI TCATGA 2 cut(s) 6, 442
CfoI GCGC 5 cut(s) 190, 202, 248, 412, 434
Cfr10I RCCGGY 1 cut(s) 242
Cfr13I GGNCC 2 cut(s) 303, 319
CseI GACGC 2 cut(s) 243, 416
Csp6I GTAC 1 cut(s) 27
CviAII CATG 3 cut(s) 7, 115, 443
CviQI GTAC 1 cut(s) 27
DdeI CTNAG 4 cut(s) 34, 323, 372, 428
DinI GGCGCC 1 cut(s) 247
DpnI GATC 2 cut(s) 310, 396
DpnII GATC 2 cut(s) 308, 394
EaeI YGGCCR 2 cut(s) 363, 390
Eam1104I CTCTTC 3 cut(s) 61, 80, 156
EarI CTCTTC 3 cut(s) 61, 80, 156
Ecl136II GAGCTC 1 cut(s) 379
Eco147I AGGCCT 1 cut(s) 449
Eco24I GRGCYC 1 cut(s) 381
Eco47I GGWCC 2 cut(s) 303, 319
Eco47III AGCGCT 2 cut(s) 189, 433
Eco53kI GAGCTC 1 cut(s) 379
Eco88I CYCGRG 1 cut(s) 298
EcoICRI GAGCTC 1 cut(s) 379
EcoO109I RGGNCCY 2 cut(s) 303, 319
EcoRII CCWGG 2 cut(s) 210, 221
EcoT38I GRGCYC 1 cut(s) 381
EgeI GGCGCC 1 cut(s) 247
EheI GGCGCC 1 cut(s) 247
Esp3I CGTCTC 1 cut(s) 444
FaeI CATG 3 cut(s) 10, 118, 446
FaiI YATR 5 cut(s) 8, 116, 422, 444, 459
FaqI GGGAC 1 cut(s) 142
FatI CATG 3 cut(s) 6, 114, 442
FauI CCCGC 2 cut(s) 168, 354
Fnu4HI GCNGC 3 cut(s) 277, 290, 350
FriOI GRGCYC 1 cut(s) 381
Fsp4HI GCNGC 3 cut(s) 277, 290, 350
GlaI GCGC 5 cut(s) 189, 201, 247, 411, 433
GluI GCNGC 3 cut(s) 277, 290, 350
HaeII RGCGCY 3 cut(s) 191, 249, 435
HaeIII GGCC 3 cut(s) 365, 392, 449
HapII CCGG 3 cut(s) 243, 249, 312
HgaI GACGC 2 cut(s) 243, 416
HhaI GCGC 5 cut(s) 190, 202, 248, 412, 434
Hin1I GRCGYC 2 cut(s) 246, 254
Hin1II CATG 3 cut(s) 10, 118, 446
Hin6I GCGC 5 cut(s) 188, 200, 246, 410, 432
HinP1I GCGC 5 cut(s) 188, 200, 246, 410, 432
HincII GTYRAC 2 cut(s) 219, 231
HindII GTYRAC 2 cut(s) 219, 231
HpaII CCGG 3 cut(s) 243, 249, 312
HphI GGTGA 1 cut(s) 54
Hpy166II GTNNAC 2 cut(s) 219, 231
Hpy188III TCNNGA 3 cut(s) 7, 374, 443
Hpy8I GTNNAC 2 cut(s) 219, 231
Hpy99I CGWCG 2 cut(s) 259, 371
HpyAV CCTTC 1 cut(s) 464
HpyCH4III ACNGT 1 cut(s) 235
HpyCH4V TGCA 2 cut(s) 85, 337
HpyF10VI GCNNNNNNNGC 1 cut(s) 273
HpyF3I CTNAG 4 cut(s) 34, 323, 372, 428
Hsp92I GRCGYC 2 cut(s) 246, 254
Hsp92II CATG 3 cut(s) 10, 118, 446
HspAI GCGC 5 cut(s) 188, 200, 246, 410, 432
KasI GGCGCC 1 cut(s) 245
KroI GCCGGC 1 cut(s) 242
KroNI GCCGGC 1 cut(s) 244
Kzo9I GATC 2 cut(s) 308, 394
LguI GCTCTTC 1 cut(s) 156
LmnI GCTCC 3 cut(s) 147, 332, 376
Lsp1109I GCAGC 2 cut(s) 288, 361
MalI GATC 2 cut(s) 310, 396
MbiI CCGCTC 2 cut(s) 163, 292
MboI GATC 2 cut(s) 308, 394
MboII GAAGA 4 cut(s) 48, 51, 67, 143
MhlI GDGCHC 1 cut(s) 381
MluCI AATT 2 cut(s) 91, 193
Mly113I GGCGCC 1 cut(s) 246
MnlI CCTC 7 cut(s) 31, 64, 155, 290, 294, 332, 439
MroNI GCCGGC 1 cut(s) 242
MspA1I CMGCKG 1 cut(s) 352
MspI CCGG 3 cut(s) 243, 249, 312
MspR9I CCNGG 3 cut(s) 212, 223, 250
MvaI CCWGG 2 cut(s) 212, 223
MvnI CGCG 3 cut(s) 200, 410, 412
MwoI GCNNNNNNNGC 1 cut(s) 273
NaeI GCCGGC 1 cut(s) 244
NarI GGCGCC 1 cut(s) 246
NciI CCSGG 1 cut(s) 250
NdeII GATC 2 cut(s) 308, 394
NgoMIV GCCGGC 1 cut(s) 242
NlaIII CATG 3 cut(s) 10, 118, 446
NlaIV GGNNCC 2 cut(s) 247, 305
NmeAIII GCCGAG 1 cut(s) 204
PagI TCATGA 2 cut(s) 6, 442
PceI AGGCCT 1 cut(s) 449
PciSI GCTCTTC 1 cut(s) 156
PdiI GCCGGC 1 cut(s) 244
PkrI GCNGC 3 cut(s) 278, 291, 351
PluTI GGCGCC 1 cut(s) 249
PpuMI RGGWCCY 2 cut(s) 303, 319
Psp124BI GAGCTC 1 cut(s) 381
Psp5II RGGWCCY 2 cut(s) 303, 319
Psp6I CCWGG 2 cut(s) 210, 221
PspGI CCWGG 2 cut(s) 210, 221
PspN4I GGNNCC 2 cut(s) 247, 305
PspPI GGNCC 2 cut(s) 303, 319
PspPPI RGGWCCY 2 cut(s) 303, 319
PvuII CAGCTG 1 cut(s) 352
RsaI GTAC 1 cut(s) 28
RsaNI GTAC 1 cut(s) 27
SacI GAGCTC 1 cut(s) 381
SapI GCTCTTC 1 cut(s) 156
SatI GCNGC 3 cut(s) 277, 290, 350
Sau3AI GATC 2 cut(s) 308, 394
Sau96I GGNCC 2 cut(s) 303, 319
ScrFI CCNGG 3 cut(s) 212, 223, 250
SduI GDGCHC 1 cut(s) 381
SetI ASST 8 cut(s) 50, 70, 144, 173, 324, 329, 354, 381
SfoI GGCGCC 1 cut(s) 247
SinI GGWCC 2 cut(s) 303, 319
SmlI CTYRAG 1 cut(s) 380
SmoI CTYRAG 1 cut(s) 380
Sse9I AATT 2 cut(s) 91, 193
SseBI AGGCCT 1 cut(s) 449
SsiI CCGC 5 cut(s) 161, 226, 290, 347, 463
SspDI GGCGCC 1 cut(s) 245
SstI GAGCTC 1 cut(s) 381
StuI AGGCCT 1 cut(s) 449
StyD4I CCNGG 3 cut(s) 210, 221, 248
TaaI ACNGT 1 cut(s) 235
TaqI TCGA 2 cut(s) 257, 294
TasI AATT 2 cut(s) 91, 193
TauI GCSGC 1 cut(s) 292
TscAI CASTG 1 cut(s) 269
TseI GCWGC 2 cut(s) 276, 349
TspDTI ATGAA 1 cut(s) 446
TspGWI ACGGA 2 cut(s) 144, 319
TspRI CASTG 1 cut(s) 269
VpaK11BI GGWCC 2 cut(s) 303, 319
XapI RAATTY 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.