Rmu_co8177510.1_g000001

Protein of unknown function (DUF760)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8177510.1
OG0030339
Physical Location & Seq
Forward (+)
69 .. 455
387 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8177510.1_g000001.1.cds

Sequence Viewer

Length: 387 bp
atggaacattgtctctcccaccacaagctcctcgctcttccgtccccgctctccaccttgaagccgagattagcgctcaatttcgcgcccaaatcccaggcgttgaccaggcggttgactgtggtagccggcttcggggcgtcgagccactgcgagttcagtagcctcaactcgccgctcgacccgaggacccgatccggcaaggagctcagctccgttttgcagaaccatccgcagctgtttcacttggccgtcgctcaggagctgaagcagttggccgatcagcgacaggacgcgcgatgtcgtatgtatctcagcgcttcgtctcatgaggcctgccttcataggttggtttttgccctaatccacacttcgtttttggtttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF760

Protein Analysis

128

Amino Acids

14.23

Weight (kDa)

9.61

Isoelectric Point (pI)

49.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0030339)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0283591
rosa_multiflora Rmu_co8177510.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 49, 178
AccII CGCG 3 cut(s) 86, 296, 298
AciI CCGC 4 cut(s) 47, 112, 176, 233
AclWI GGATC 1 cut(s) 189
AcoI YGGCCR 2 cut(s) 249, 276
AcuI CTGAAG 1 cut(s) 287
AcyI GRCGYC 1 cut(s) 140
AfeI AGCGCT 2 cut(s) 75, 319
AfiI CCNNNNNNNGG 1 cut(s) 135
AgsI TTSAA 1 cut(s) 61
AjnI CCWGG 2 cut(s) 96, 107
AluBI AGCT 5 cut(s) 28, 208, 213, 238, 265
AluI AGCT 5 cut(s) 28, 208, 213, 238, 265
Alw21I GWGCWC 1 cut(s) 210
Alw26I GTCTC 2 cut(s) 17, 330
AlwI GGATC 1 cut(s) 189
AlwNI CAGNNNCTG 1 cut(s) 265
Ama87I CYCGRG 1 cut(s) 184
Aor51HI AGCGCT 2 cut(s) 75, 319
AoxI GGCC 3 cut(s) 249, 276, 333
ApeKI GCWGC 1 cut(s) 235
AspLEI GCGC 4 cut(s) 76, 88, 298, 320
AspS9I GGNCC 1 cut(s) 189
AvaI CYCGRG 1 cut(s) 184
AvaII GGWCC 1 cut(s) 189
BanII GRGCYC 1 cut(s) 210
Bbv12I GWGCWC 1 cut(s) 210
BbvI GCAGC 1 cut(s) 247
BccI CCATC 1 cut(s) 237
BceAI ACGGC 1 cut(s) 236
BciT130I CCWGG 2 cut(s) 98, 109
BcoDI GTCTC 2 cut(s) 17, 330
BfoI RGCGCY 2 cut(s) 77, 321
BisI GCNGC 2 cut(s) 176, 236
BlpI GCTNAGC 1 cut(s) 209
BlsI GCNGC 2 cut(s) 177, 237
Bme1390I CCNGG 2 cut(s) 98, 109
Bme18I GGWCC 1 cut(s) 189
BmeT110I CYCGRG 1 cut(s) 184
BmgT120I GGNCC 1 cut(s) 189
BmiI GGNNCC 1 cut(s) 191
BmrFI CCNGG 2 cut(s) 98, 109
BplI GAGNNNNNCTC 2 cut(s) 197, 229
Bpu10I CCTNAGC 1 cut(s) 258
Bpu1102I GCTNAGC 1 cut(s) 209
BsaHI GRCGYC 1 cut(s) 140
BsaJI CCNNGG 2 cut(s) 96, 185
Bsc4I CCNNNNNNNGG 1 cut(s) 135
Bse118I RCCGGY 1 cut(s) 128
BseBI CCWGG 2 cut(s) 98, 109
BseDI CCNNGG 2 cut(s) 96, 185
BseGI GGATG 1 cut(s) 229
BseLI CCNNNNNNNGG 1 cut(s) 135
BseMII CTCAG 3 cut(s) 223, 272, 328
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 1 cut(s) 247
Bsh1236I CGCG 3 cut(s) 86, 296, 298
BshFI GGCC 3 cut(s) 251, 278, 335
BsiHKAI GWGCWC 1 cut(s) 210
BsiHKCI CYCGRG 1 cut(s) 184
BsiSI CCGG 2 cut(s) 129, 198
BslFI GGGAC 1 cut(s) 28
BslI CCNNNNNNNGG 1 cut(s) 135
BsmAI GTCTC 2 cut(s) 17, 330
BsmBI CGTCTC 1 cut(s) 330
BsmFI GGGAC 1 cut(s) 28
BsnI GGCC 3 cut(s) 251, 278, 335
BsoBI CYCGRG 1 cut(s) 184
Bsp1286I GDGCHC 1 cut(s) 210
Bsp143I GATC 2 cut(s) 194, 280
Bsp1720I GCTNAGC 1 cut(s) 209
BspACI CCGC 4 cut(s) 47, 112, 176, 233
BspANI GGCC 3 cut(s) 251, 278, 335
BspCNI CTCAG 3 cut(s) 222, 271, 327
BspFNI CGCG 3 cut(s) 86, 296, 298
BspHI TCATGA 1 cut(s) 328
BspLI GGNNCC 1 cut(s) 191
BspPI GGATC 1 cut(s) 189
BspQI GCTCTTC 1 cut(s) 42
BsrBI CCGCTC 2 cut(s) 49, 178
BsrFI RCCGGY 1 cut(s) 128
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 2 cut(s) 96, 185
BssMI GATC 2 cut(s) 194, 280
BssNI GRCGYC 1 cut(s) 140
Bst2UI CCWGG 2 cut(s) 98, 109
Bst4CI ACNGT 1 cut(s) 121
Bst6I CTCTTC 1 cut(s) 42
BstACI GRCGYC 1 cut(s) 140
BstC8I GCNNGC 2 cut(s) 130, 337
BstDEI CTNAG 3 cut(s) 209, 258, 314
BstF5I GGATG 1 cut(s) 229
BstFNI CGCG 3 cut(s) 86, 296, 298
BstH2I RGCGCY 2 cut(s) 77, 321
BstHHI GCGC 4 cut(s) 76, 88, 298, 320
BstKTI GATC 2 cut(s) 197, 283
BstMAI GTCTC 2 cut(s) 17, 330
BstMBI GATC 2 cut(s) 194, 280
BstNI CCWGG 2 cut(s) 98, 109
BstSCI CCNGG 2 cut(s) 96, 107
BstUI CGCG 3 cut(s) 86, 296, 298
BstV1I GCAGC 1 cut(s) 247
BsuRI GGCC 3 cut(s) 251, 278, 335
BtgZI GCGATG 1 cut(s) 313
BtsCI GGATG 1 cut(s) 229
BtsI GCAGTG 1 cut(s) 148
BtsIMutI CAGTG 1 cut(s) 148
Cac8I GCNNGC 2 cut(s) 130, 337
CaiI CAGNNNCTG 1 cut(s) 265
CciI TCATGA 1 cut(s) 328
CfoI GCGC 4 cut(s) 76, 88, 298, 320
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 1 cut(s) 189
CseI GACGC 2 cut(s) 129, 302
CviAII CATG 1 cut(s) 329
DdeI CTNAG 3 cut(s) 209, 258, 314
DpnI GATC 2 cut(s) 196, 282
DpnII GATC 2 cut(s) 194, 280
EaeI YGGCCR 2 cut(s) 249, 276
Eam1104I CTCTTC 1 cut(s) 42
EarI CTCTTC 1 cut(s) 42
Ecl136II GAGCTC 1 cut(s) 208
Eco147I AGGCCT 1 cut(s) 335
Eco24I GRGCYC 1 cut(s) 210
Eco47I GGWCC 1 cut(s) 189
Eco47III AGCGCT 2 cut(s) 75, 319
Eco53kI GAGCTC 1 cut(s) 208
Eco57I CTGAAG 1 cut(s) 287
Eco88I CYCGRG 1 cut(s) 184
EcoICRI GAGCTC 1 cut(s) 208
EcoO109I RGGNCCY 1 cut(s) 189
EcoRII CCWGG 2 cut(s) 96, 107
EcoT38I GRGCYC 1 cut(s) 210
Esp3I CGTCTC 1 cut(s) 330
FaeI CATG 1 cut(s) 332
FaiI YATR 3 cut(s) 308, 330, 345
FaqI GGGAC 1 cut(s) 28
FatI CATG 1 cut(s) 328
FauI CCCGC 1 cut(s) 54
Fnu4HI GCNGC 2 cut(s) 176, 236
FokI GGATG 1 cut(s) 216
FriOI GRGCYC 1 cut(s) 210
Fsp4HI GCNGC 2 cut(s) 176, 236
GlaI GCGC 4 cut(s) 75, 87, 297, 319
GluI GCNGC 2 cut(s) 176, 236
HaeII RGCGCY 2 cut(s) 77, 321
HaeIII GGCC 3 cut(s) 251, 278, 335
HapII CCGG 2 cut(s) 129, 198
HgaI GACGC 2 cut(s) 129, 302
HhaI GCGC 4 cut(s) 76, 88, 298, 320
Hin1I GRCGYC 1 cut(s) 140
Hin1II CATG 1 cut(s) 332
Hin6I GCGC 4 cut(s) 74, 86, 296, 318
HinP1I GCGC 4 cut(s) 74, 86, 296, 318
HincII GTYRAC 2 cut(s) 105, 117
HindII GTYRAC 2 cut(s) 105, 117
HpaII CCGG 2 cut(s) 129, 198
Hpy166II GTNNAC 2 cut(s) 105, 117
Hpy188III TCNNGA 2 cut(s) 260, 329
Hpy8I GTNNAC 2 cut(s) 105, 117
Hpy99I CGWCG 2 cut(s) 145, 257
HpyAV CCTTC 1 cut(s) 350
HpyCH4III ACNGT 1 cut(s) 121
HpyCH4V TGCA 1 cut(s) 223
HpyF3I CTNAG 3 cut(s) 209, 258, 314
Hsp92I GRCGYC 1 cut(s) 140
Hsp92II CATG 1 cut(s) 332
HspAI GCGC 4 cut(s) 74, 86, 296, 318
KroI GCCGGC 1 cut(s) 128
KroNI GCCGGC 1 cut(s) 130
Kzo9I GATC 2 cut(s) 194, 280
LguI GCTCTTC 1 cut(s) 42
LmnI GCTCC 4 cut(s) 33, 205, 218, 262
LpnPI CCDG 9 cut(s) 83, 94, 110, 121, 142, 211, 245, 275, 349
Lsp1109I GCAGC 1 cut(s) 247
MalI GATC 2 cut(s) 196, 282
MbiI CCGCTC 2 cut(s) 49, 178
MboI GATC 2 cut(s) 194, 280
MboII GAAGA 1 cut(s) 29
MhlI GDGCHC 1 cut(s) 210
MluCI AATT 1 cut(s) 79
MnlI CCTC 4 cut(s) 41, 176, 180, 325
MroNI GCCGGC 1 cut(s) 128
MseI TTAA 1 cut(s) 385
MspA1I CMGCKG 1 cut(s) 238
MspI CCGG 2 cut(s) 129, 198
MspR9I CCNGG 2 cut(s) 98, 109
MvaI CCWGG 2 cut(s) 98, 109
MvnI CGCG 3 cut(s) 86, 296, 298
NaeI GCCGGC 1 cut(s) 130
NdeII GATC 2 cut(s) 194, 280
NgoMIV GCCGGC 1 cut(s) 128
NlaIII CATG 1 cut(s) 332
NlaIV GGNNCC 1 cut(s) 191
NmeAIII GCCGAG 1 cut(s) 90
PagI TCATGA 1 cut(s) 328
PceI AGGCCT 1 cut(s) 335
PciSI GCTCTTC 1 cut(s) 42
PdiI GCCGGC 1 cut(s) 130
PkrI GCNGC 2 cut(s) 177, 237
PpuMI RGGWCCY 1 cut(s) 189
Psp124BI GAGCTC 1 cut(s) 210
Psp5II RGGWCCY 1 cut(s) 189
Psp6I CCWGG 2 cut(s) 96, 107
PspGI CCWGG 2 cut(s) 96, 107
PspN4I GGNNCC 1 cut(s) 191
PspPI GGNCC 1 cut(s) 189
PspPPI RGGWCCY 1 cut(s) 189
PstNI CAGNNNCTG 1 cut(s) 265
PvuII CAGCTG 1 cut(s) 238
SacI GAGCTC 1 cut(s) 210
SapI GCTCTTC 1 cut(s) 42
SaqAI TTAA 1 cut(s) 385
SatI GCNGC 2 cut(s) 176, 236
Sau3AI GATC 2 cut(s) 194, 280
Sau96I GGNCC 1 cut(s) 189
ScrFI CCNGG 2 cut(s) 98, 109
SduI GDGCHC 1 cut(s) 210
SetI ASST 7 cut(s) 30, 59, 210, 215, 240, 267, 350
SinI GGWCC 1 cut(s) 189
Sse9I AATT 1 cut(s) 79
SseBI AGGCCT 1 cut(s) 335
SsiI CCGC 4 cut(s) 47, 112, 176, 233
SstI GAGCTC 1 cut(s) 210
StuI AGGCCT 1 cut(s) 335
StyD4I CCNGG 2 cut(s) 96, 107
TaaI ACNGT 1 cut(s) 121
TaqI TCGA 2 cut(s) 143, 180
TasI AATT 1 cut(s) 79
TauI GCSGC 1 cut(s) 178
Tru1I TTAA 1 cut(s) 385
Tru9I TTAA 1 cut(s) 385
TscAI CASTG 1 cut(s) 155
TseI GCWGC 1 cut(s) 235
TspDTI ATGAA 1 cut(s) 332
TspGWI ACGGA 2 cut(s) 30, 205
TspRI CASTG 1 cut(s) 155
VpaK11BI GGWCC 1 cut(s) 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.