RchiOBHm_Chr7g0182171

Belongs to the formin-like family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
3522822 .. 3533256
10435 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16250

Sequence Viewer

Length: 4686 bp
ATGGCGCTGTTCCGAAGGTTCTTTTATCGGAAGCCGCCGGATCGGCTTCTAGAGATTTCTGAACGGGTCTACGTTTTTGACTGCTGCTTCTCCACCGATGTGTTGGAAGAAGATGAGTACAAACTGTACTTGGGTGGCATTGTAGCCCAGCTACAGGACTACTTCCCTGATGCTTCTTTCATGGTGTTTAACTTTAGAGAAGGGGAGAGACGGAGCCAAATTTCAGACGTATTGTCCCAGTATGACATGACAGTTATGGATTACCCTCGGCAGTATGAGAGTTGCCCATTGCTGCCACTGGAGATGATTCATCACTTTCTTCGATCAAGTGAAAGTTGGTTGTCATTGGAGGGGCAACAGAATGTACTGCTGATGCATTGTGAAAGAGGAGGATGGCCTGTGCTTGCCTTTATGCTTGCAGGTCTTTTGCTATACCGTAAAAATTACACCGGGGAGCAGAAGACTCTTGATATGGTTTACAGGCAGGCTCCTAAACAGCTTCTCCATCTGTTGACTCCTTTAAACCCACAGCCCTCGCAGCTTAGATATCTTCAGTACATTTCACGAAGAAATCTGGGTGCTGATTGGCCTCCATCAGATACACCTCTATTTTTGGATTGTCTGATACTTAGAAACCTTCCACTTTTTGATGACGGAAAAGGTTGCAGGCCCTTCATACGAGTTTATGGTCAAGACCCTTCAACACCGGCCAACAGAAGTTCTAAGCTTCTCTTTTCAAATTTAAAGACTAAAAACAATACTCACCACTATGTACAGGCAGAGTGTATGCTGGTGAAAATGGATATCCGTTGTCGTGTTCGAGGGGATGTGGTAGTCGAGTGTATCCACCTGGATGAAGATCTGGTTCATGAGGAGATGATGTTCAGGGTTATGTTTCACACAACATTTGTACGGTCAAATATATTGATGCTCAACCGCGACGATATTGATATTCTTTGGGATGCCAAGGAACAGTTCTCAAAGGACTTCAGATCGGAGGTACTTTTTTTGGACGCTGATGCTGTTGTGCCTAATCTCACCACAGTTGTGGCAAGTGATGATGGAAATGAGACAGGGACTGCTTCACCTGAGGAATTTTATGAGGTGGAAGAAATCTTCAGCAATGCCATAGATGGACAGGAACTGAAGTTGGCATTTGATACTGCACTGGTTCACAGCAATGCACCTGAAAATATAGATCAGAAAGAAGTCTGGAGGGAGGATTTAGAGCCTCACTCATTCCAAGACTGTGCGTCAGATGATGGGAACCACAAAAAGGACAGAAATGTGGATTCTACAACTGATGCAGTGAAGGACATTGCTGTGGATGATGTGAAATACAAGCTGGAAGAGGTGGATTCCAATCTGGACGCAGTGAAAGACATTGCTGTGGATGATGGGGATACAAACTCGAATTTCATCTTAATTTCTGCTGATATCCCAAGTCATGAAGGAACTAAGGAAGTGGCAGAAGAGGTATGTGAAAATTTGGAAGAGATGAAGGATATAACTGATGGAGAAGACACTTCTAAGCTAGAGACCAAGCTCAGACAAGAAAAACTGAATGCCGAGGTCTCTAGACAAAAATCTGAGAAATTGCAGCCGCCTACTTCTAAGCCTGTATTGAACACAAAAACAGGTTCAGAAACAACGCTTACAAAACAGAAGGCTAAACAGCAAGAAACTCAGGGCCCTTCAGCAAGAGTAGCAAAACCAAATGCTGTATCTAGGTGGATTCCTCCTAACAAAGGCTCACATACTAATTCAATGCACGTTTCATATCCACCGTCAAGATATAACAGTGCACCAGCTGCTTTTGCCAATAATACTTCTTCAAAAGATACAAATGCAAACCCCAAATTGAAGGCTTCTGCTGTTAATACAGCATCTGGAACTGCACCAAGGGATGCGGCAAGTAAACTGAAAAATAGTAATGTTGATCCTTTAAAGCATTCAGAATCAGCACCAGACACACTTGCATCCTGCCTGCCATCAACAGTTCCTCCAAATCAAGAGACACATGCTTCCTCTGTTTCTACGCCACATATTAGCCCACAGCAAGTAGTGACCGTTCCACCTCCTCCTCCTCCTCCACCTCATGAGTCTTTCTCACCAGCTACCCCATCTTTGCAGGTAGCTGCACCAGCAACTACTCCATCACCTCCTCCTCCTCCTCCTCCTCCACCACCACCTCCTTTCCTAAGTAGTAATGTGGTGTCGTTAAAGCCCCCTTCTCCTCCCCCACCACCTCCGCCTCCACCTACTAGTGGGCAGGATACTGTTATACCTGTGCCCCCTATAATTCCACCTCCTCCTCCTCCCTCTGTTAAAGCTAGTGGCAAAAATGGTGGCCCCATATTGCCTTCACAACTTCCATCATCCCTTTGGAAGGTTGGGTACTCTACAGCCTCCCGGGGTTTGGTGGGAAGATGCTTTAAGTGCATTGAAACTAAGTGTTGGGATCCCTACACCACCACCACCTCCCACACATGGAGCTCCACCACCACCTCCTCCACCCCCACCTCTTTCATGTGGAGCTCCATCTCCACCACCACCGCCACCACCGCCTCCAATGCAAGGAACTATACCTCCACCACCTCCACCTCCCTTACATGGAGCTCCGCCTCCCCCACCCCATCGTCCTCTGTATGCAGCTCCACCACCATGTTTAGTGCAAGGTGCTCCATCTCCACCTCCTCCACCACCACTTCCAGGAGCTCCACCTCCGCCACCACCTCCTCCTTCTTATGGGGCTCAGCCACCACGTGTAGTGCAAGGTGCACCATGTCCACCTCCTCCGCCACCACCACCTCCAATGCATGGATCCCACCTCCGCCACCACCACCTCCAATGCATGGTGCCCCACCTCCGCCACCACCACCTCCAATGCATGGTGCCCCACCTCCGCCGCCACCACCTCCAATGCACGGTGCCCCACCTCCGCCGCCACCACCTCCAATGCACGGTGCCCCACCTCCGCCACCACCTCCAATGCACGGTGCCCCACCTCCTCCACCCCCTCCAATGTACGGTGCCCCACCTCCTCCACCCCCTCCAATGTACGGTGCCCCACCCCCTCCACCCCCTCCAATGTGTGGTGCCCCACCTCCTCCTCCTCCACCTCCTAGTGGAGGTCGGGCACCCTCACCTCCTCCTCCACCTGGTGGAGGTCGGGCACCCTCACCTCCCCCACCACCTGGTGGAAGTCGAGCACCCCCACCTCCCCCGCCACCTGGTGGAAGTCGAGCTCCCCCACCTCCCCCACCACCTGGTGGAGGTCGAGCGCCCCCACCTCCACCACCTCCAGGAGCTCGTGGTCCTGGGCCTCCTGCTCCACCTGGACCTCCAGGTGGTGGTCCACCACCACCACCTCCATTGGGTGCCAAAGTTAATGATGCAAGAGGCCTTTCTTCTGGAAGAGGGCGTGGATTTCCACGTCCAGGGATGGGCCCCTCTGCTACAGCGCCTCGAAGATCCTCATTAAAACCACTACATTGGAGCAAGGTGACAAGGGCATTGCAAGGAAGCTTATGGGAAGAACTGCAAAGACATGGAGGAAATCAAATTGCGCCTGAATTTGATGTGTCAGAGATAGAGAGCCTTTTCTCTGCAACAGTTCCAAAACCTGCTAACAAATCTGGAGACCGACGCAAGTCTGCTGGATCCAAACCTGACAAAGTCCACTTGGTCGACCTGAGAAGGGCAAACAACACTGAAATTATGCTCACAAAAGTTAAGATGCCGCTTCCTGATATGATGGCTGCTGTTTTAGCAATGGATGAGTCGGTATTAGATTCTGACCAGGTGGAAAATCTAATTAAGTTTTGTCCTACTAAAGAGGAAATGGAACTTCTCAAGAACTATACTGGCGACAAGGAGACCCTGGGGAAGTGTGAACAGTATTTTTTGGAGTTGATGAAAGTGCCTCGGGTGGAGTCAAAACTAAGAGTATTTTCTTTCAAGATTCAGTTCAGCTCACAGGCCTCAGAATTCAAAAAAAGTTTAAACACAGTAAACTCTGCATGCGAGGAGGTTCGAACTTCTGAAAAGTTCAAGGAAATTATGAAGAAAATTCTTTTTCTGGGGAATACATTGAACCAAGGAACTGCAAGGGGTTCTGCTGTTGGGTTCAAGTTGGACAGTCTTCTGAAGCTCTCTGATACTCGTGCTTCAACTAGTAAGATGACACTGATGCATTATCTCTGTAAGGGTCTTGCTTCCAGATCTCCTGAACTTCTTGGTTTTCATCAGGACCTTGTCAACCTGGAACCTGCAACAAAGATACAATTGAAGTCTTTAGCAGAAGAAATGCAAGCTTTAATCAAGGGGTTAGAAAAGCTCAAGCAGGAGCTGGTGGCATCAGAAAATGATGGCCCTGTTTCAGAGGTTTTTCGTAAGACATTGAAGGAGTTCATTACTGTTGCTGAGACAGAAGTGGCATCTGTGACGAACCTATATTCTGTGGTGGGTAGAGCAGCTGATCAACTTGCATTATATTTTGGTGAGGATCCTGCACGTTGCCCATTTGAGCAAGTTACTGTGACTCTCTTAAACTTTGTGAGGTTGTTTAAGAAAGCACACGAAGAGAATTGCAAACAGGCTGAATTGGATAAGAAGAAAGCTGAGAAGGAAGCGGAAATGGAAAAGGCCAAGGGTGTTAACCTTACAAAAAAAGCAACAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1561

Amino Acids

169.46

Weight (kDa)

6.8

Isoelectric Point (pI)

60.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTEN_C2 PF10409 199 - 336 8.4e-36 C2 domain of PTEN tumour-suppressor protein
FH2 PF02181 1156 - 1524 3.3e-119 Formin Homology 2 Domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 4 cut(s) 410, 2122, 3634, 4279
AccI GTMKAC 2 cut(s) 69, 3690
AccII CGCG 1 cut(s) 939
AcoI YGGCCR 1 cut(s) 708
AcsI RAATTY 8 cut(s) 219, 739, 1094, 1414, 1486, 3575, 3989, 4071
AcuI CTGAAG 6 cut(s) 536, 973, 1102, 1166, 1680, 4169
AcvI CACGTG 1 cut(s) 2766
AdeI CACNNNGTG 5 cut(s) 2766, 3164, 3200, 3236, 3272
AflIII ACRYGT 1 cut(s) 2765
AhdI GACNNNNNGTC 2 cut(s) 232, 1252
AhlI ACTAGT 2 cut(s) 2264, 4175
AjiI CACGTC 1 cut(s) 3437
AjuI GAANNNNNNNTTGG 2 cut(s) 959, 991
AleI CACNNNNGTG 2 cut(s) 98, 1046
AloI GAACNNNNNNTCC 4 cut(s) 866, 898, 2573, 2605
Alw26I GTCTC 8 cut(s) 202, 1064, 1532, 1579, 2009, 3636, 3872, 4421
Alw44I GTGCAC 2 cut(s) 1803, 2779
AlwNI CAGNNNCTG 4 cut(s) 1079, 1144, 1889, 4351
Ama87I CYCGRG 2 cut(s) 2412, 3927
ApaI GGGCCC 2 cut(s) 1694, 3452
ApaLI GTGCAC 2 cut(s) 1803, 2779
ApeKI GCWGC 9 cut(s) 84, 292, 538, 1600, 1811, 2138, 2652, 3761, 4475
ApoI RAATTY 8 cut(s) 219, 739, 1094, 1414, 1486, 3575, 3989, 4071
Asp700I GAANNNNTTC 1 cut(s) 4409
AspLEI GCGC 4 cut(s) 7, 3286, 3466, 3571
AsuC2I CCSGG 3 cut(s) 451, 2413, 2414
AsuII TTCGAA 1 cut(s) 4036
AvaI CYCGRG 2 cut(s) 2412, 3927
AvaII GGWCC 4 cut(s) 3317, 3341, 3356, 4252
AxyI CCTNAGG 1 cut(s) 1089
BamHI GGATCC 4 cut(s) 2461, 2823, 3662, 4507
BanII GRGCYC 9 cut(s) 1694, 2498, 2540, 2621, 2720, 2756, 3250, 3313, 3452
BarI GAAGNNNNNNTAC 2 cut(s) 2381, 2413
BauI CACGAG 2 cut(s) 3312, 4164
BbrPI CACGTG 1 cut(s) 2766
BbsI GAAGAC 3 cut(s) 467, 1527, 4136
BbvI GCAGC 9 cut(s) 71, 279, 550, 1612, 1798, 2125, 2664, 3748, 4487
BciVI GTATCC 3 cut(s) 854, 1396, 2269
BclI TGATCA 1 cut(s) 4480
BcnI CCSGG 3 cut(s) 451, 2413, 2414
BcoDI GTCTC 8 cut(s) 202, 1064, 1532, 1579, 2009, 3636, 3872, 4421
BcuI ACTAGT 2 cut(s) 2264, 4175
BfaI CTAG 8 cut(s) 50, 1535, 1578, 1728, 2265, 2334, 3126, 4176
BfmI CTRYAG 3 cut(s) 152, 2403, 3459
BfoI RGCGCY 3 cut(s) 8, 3287, 3467
BfuAI ACCTGC 4 cut(s) 410, 2122, 3634, 4279
BfuI GTATCC 3 cut(s) 854, 1396, 2269
BglI GCCNNNNNGGC 1 cut(s) 43
BglII AGATCT 2 cut(s) 859, 4223
BlpI GCTNAGC 1 cut(s) 2755
Bme18I GGWCC 4 cut(s) 3317, 3341, 3356, 4252
BmeRI GACNNNNNGTC 2 cut(s) 232, 1252
BmeT110I CYCGRG 2 cut(s) 2412, 3927
BmgBI CACGTC 1 cut(s) 3437
BmrI ACTGGG 1 cut(s) 232
BmuI ACTGGG 1 cut(s) 232
BoxI GACNNNNGTC 1 cut(s) 3652
BpiI GAAGAC 3 cut(s) 467, 1527, 4136
BplI GAGNNNNNCTC 4 cut(s) 1220, 1252, 2093, 2125
BpmI CTGGAG 5 cut(s) 320, 1234, 3288, 3330, 3660
Bpu1102I GCTNAGC 1 cut(s) 2755
Bpu14I TTCGAA 1 cut(s) 4036
BpuEI CTTGAG 2 cut(s) 3839, 4325
BpuMI CCSGG 3 cut(s) 451, 2413, 2414
BsaAI YACGTR 1 cut(s) 2766
BsaBI GATNNNNATC 2 cut(s) 858, 1362
BsaI GGTCTC 4 cut(s) 1532, 1579, 3636, 3872
BsaXI ACNNNNNCTCC 8 cut(s) 486, 516, 866, 896, 1987, 2017, 2573, 2603
Bse118I RCCGGY 1 cut(s) 706
Bse1I ACTGG 4 cut(s) 238, 303, 1173, 3871
Bse21I CCTNAGG 1 cut(s) 1089
Bse3DI GCAATG 7 cut(s) 287, 1129, 1186, 1317, 1383, 3515, 3780
Bse8I GATNNNNATC 2 cut(s) 858, 1362
BseJI GATNNNNATC 2 cut(s) 858, 1362
BseMI GCAATG 7 cut(s) 287, 1129, 1186, 1317, 1383, 3515, 3780
BseMII CTCAG 9 cut(s) 1080, 1561, 1581, 1700, 2769, 3686, 3999, 4416, 4614
BseNI ACTGG 4 cut(s) 238, 303, 1173, 3871
BseXI GCAGC 9 cut(s) 71, 279, 550, 1612, 1798, 2125, 2664, 3748, 4487
BseYI CCCAGC 1 cut(s) 147
BsgI GTGCAG 4 cut(s) 1149, 1881, 2124, 4497
Bsh1236I CGCG 1 cut(s) 939
BsiHKCI CYCGRG 2 cut(s) 2412, 3927
BsiSI CCGG 4 cut(s) 38, 450, 707, 2413
BslFI GGGAC 2 cut(s) 220, 1090
BsmAI GTCTC 8 cut(s) 202, 1064, 1532, 1579, 2009, 3636, 3872, 4421
BsmBI CGTCTC 1 cut(s) 202
BsmFI GGGAC 2 cut(s) 220, 1090
BsmI GAATGC 2 cut(s) 1570, 1951
Bso31I GGTCTC 4 cut(s) 1532, 1579, 3636, 3872
BsoBI CYCGRG 2 cut(s) 2412, 3927
Bsp119I TTCGAA 1 cut(s) 4036
Bsp120I GGGCCC 2 cut(s) 1690, 3448
Bsp1407I TGTACA 1 cut(s) 772
Bsp1720I GCTNAGC 1 cut(s) 2755
BspCNI CTCAG 9 cut(s) 1081, 1560, 1582, 1699, 2768, 3687, 3998, 4417, 4615
BspFNI CGCG 1 cut(s) 939
BspHI TCATGA 3 cut(s) 868, 1447, 2098
BspMI ACCTGC 4 cut(s) 410, 2122, 3634, 4279
BspT104I TTCGAA 1 cut(s) 4036
BspTNI GGTCTC 4 cut(s) 1532, 1579, 3636, 3872
BsrDI GCAATG 7 cut(s) 287, 1129, 1186, 1317, 1383, 3515, 3780
BsrFI RCCGGY 1 cut(s) 706
BsrGI TGTACA 1 cut(s) 772
BsrI ACTGG 4 cut(s) 238, 303, 1173, 3871
BssAI RCCGGY 1 cut(s) 706
BssSI CACGAG 2 cut(s) 3312, 4164
BssT1I CCWWGG 4 cut(s) 966, 1901, 4099, 4650
Bst2BI CACGAG 2 cut(s) 3312, 4164
Bst6I CTCTTC 5 cut(s) 1344, 1467, 1488, 3412, 4578
BstAPI GCANNNNNTGC 1 cut(s) 1811
BstAUI TGTACA 1 cut(s) 772
BstBAI YACGTR 1 cut(s) 2766
BstBI TTCGAA 1 cut(s) 4036
BstC8I GCNNGC 7 cut(s) 405, 417, 486, 668, 1988, 4024, 4314
BstENI CCTNNNNNAGG 5 cut(s) 1746, 2387, 3129, 3165, 3273
BstFNI CGCG 1 cut(s) 939
BstH2I RGCGCY 3 cut(s) 8, 3287, 3467
BstHHI GCGC 4 cut(s) 7, 3286, 3466, 3571
BstMAI GTCTC 8 cut(s) 202, 1064, 1532, 1579, 2009, 3636, 3872, 4421
BstNSI RCATGY 2 cut(s) 2024, 4026
BstPAI GACNNNNGTC 1 cut(s) 3652
BstSFI CTRYAG 3 cut(s) 152, 2403, 3459
BstUI CGCG 1 cut(s) 939
BstV1I GCAGC 9 cut(s) 71, 279, 550, 1612, 1798, 2125, 2664, 3748, 4487
BstV2I GAAGAC 3 cut(s) 467, 1527, 4136
BstX2I RGATCY 7 cut(s) 859, 2461, 2823, 3473, 3662, 4223, 4507
BstXI CCANNNNNNTGG 2 cut(s) 1048, 3495
BstYI RGATCY 7 cut(s) 859, 2461, 2823, 3473, 3662, 4223, 4507
Bsu36I CCTNAGG 1 cut(s) 1089
BsuI GTATCC 3 cut(s) 854, 1396, 2269
BtrI CACGTC 1 cut(s) 3437
BtsI GCAGTG 2 cut(s) 1314, 1380
BtsIMutI CAGTG 7 cut(s) 296, 1166, 1314, 1380, 1807, 3711, 4187
BveI ACCTGC 4 cut(s) 410, 2122, 3634, 4279
Cac8I GCNNGC 7 cut(s) 405, 417, 486, 668, 1988, 4024, 4314
CaiI CAGNNNCTG 4 cut(s) 1079, 1144, 1889, 4351
CciI TCATGA 3 cut(s) 868, 1447, 2098
CfoI GCGC 4 cut(s) 7, 3286, 3466, 3571
Cfr10I RCCGGY 1 cut(s) 706
Cfr9I CCCGGG 1 cut(s) 2412
CseI GACGC 4 cut(s) 1022, 1242, 1379, 3657
CsiI ACCWGGT 5 cut(s) 3160, 3196, 3232, 3268, 3801
CspCI CAANNNNNGTGG 4 cut(s) 2329, 2364, 3357, 3392
DraI TTTAAA 4 cut(s) 522, 744, 1947, 4005
DraIII CACNNNGTG 5 cut(s) 2766, 3164, 3200, 3236, 3272
DriI GACNNNNNGTC 2 cut(s) 232, 1252
EaeI YGGCCR 1 cut(s) 708
Eam1104I CTCTTC 5 cut(s) 1344, 1467, 1488, 3412, 4578
Eam1105I GACNNNNNGTC 2 cut(s) 232, 1252
EarI CTCTTC 5 cut(s) 1344, 1467, 1488, 3412, 4578
EciI GGCGGA 9 cut(s) 2241, 2611, 2716, 2788, 2823, 2859, 2895, 2931, 2967
Ecl136II GAGCTC 6 cut(s) 2496, 2538, 2619, 2718, 3248, 3311
Eco130I CCWWGG 4 cut(s) 966, 1901, 4099, 4650
Eco147I AGGCCT 2 cut(s) 3405, 3983
Eco24I GRGCYC 9 cut(s) 1694, 2498, 2540, 2621, 2720, 2756, 3250, 3313, 3452
Eco31I GGTCTC 4 cut(s) 1532, 1579, 3636, 3872
Eco32I GATATC 3 cut(s) 548, 805, 1438
Eco47I GGWCC 4 cut(s) 3317, 3341, 3356, 4252
Eco53kI GAGCTC 6 cut(s) 2496, 2538, 2619, 2718, 3248, 3311
Eco57I CTGAAG 6 cut(s) 536, 973, 1102, 1166, 1680, 4169
Eco72I CACGTG 1 cut(s) 2766
Eco81I CCTNAGG 1 cut(s) 1089
Eco88I CYCGRG 2 cut(s) 2412, 3927
EcoICRI GAGCTC 6 cut(s) 2496, 2538, 2619, 2718, 3248, 3311
EcoNI CCTNNNNNAGG 5 cut(s) 1746, 2387, 3129, 3165, 3273
EcoO109I RGGNCCY 5 cut(s) 669, 1690, 1691, 3449, 4252
EcoRI GAATTC 1 cut(s) 3989
EcoRV GATATC 3 cut(s) 548, 805, 1438
EcoT14I CCWWGG 4 cut(s) 966, 1901, 4099, 4650
EcoT22I ATGCAT 5 cut(s) 378, 2821, 2856, 2892, 4197
EcoT38I GRGCYC 9 cut(s) 1694, 2498, 2540, 2621, 2720, 2756, 3250, 3313, 3452
ErhI CCWWGG 4 cut(s) 966, 1901, 4099, 4650
Esp3I CGTCTC 1 cut(s) 202
FalI AAGNNNNNCTT 2 cut(s) 716, 748
FaqI GGGAC 2 cut(s) 220, 1090
FauI CCCGC 1 cut(s) 3234
FbaI TGATCA 1 cut(s) 4480
FblI GTMKAC 2 cut(s) 69, 3690
FriOI GRGCYC 9 cut(s) 1694, 2498, 2540, 2621, 2720, 2756, 3250, 3313, 3452
FspBI CTAG 8 cut(s) 50, 1535, 1578, 1728, 2265, 2334, 3126, 4176
GlaI GCGC 4 cut(s) 6, 3285, 3465, 3570
GsaI CCCAGC 1 cut(s) 151
GsuI CTGGAG 5 cut(s) 320, 1234, 3288, 3330, 3660
HaeII RGCGCY 3 cut(s) 8, 3287, 3467
HapII CCGG 4 cut(s) 38, 450, 707, 2413
HgaI GACGC 4 cut(s) 1022, 1242, 1379, 3657
HhaI GCGC 4 cut(s) 7, 3286, 3466, 3571
Hin6I GCGC 4 cut(s) 5, 3284, 3464, 3569
HinP1I GCGC 4 cut(s) 5, 3284, 3464, 3569
HincII GTYRAC 4 cut(s) 513, 3691, 4261, 4660
HindII GTYRAC 4 cut(s) 513, 3691, 4261, 4660
HindIII AAGCTT 3 cut(s) 725, 3526, 4314
HpaI GTTAAC 1 cut(s) 4660
HpaII CCGG 4 cut(s) 38, 450, 707, 2413
Hpy99I CGWCG 2 cut(s) 944, 3651
HpyCH4IV ACGT 6 cut(s) 72, 228, 1773, 2765, 3436, 4516
HpySE526I ACGT 6 cut(s) 72, 228, 1773, 2765, 3436, 4516
HspAI GCGC 4 cut(s) 5, 3284, 3464, 3569
Ksp22I TGATCA 1 cut(s) 4480
KspAI GTTAAC 1 cut(s) 4660
Lsp1109I GCAGC 9 cut(s) 71, 279, 550, 1612, 1798, 2125, 2664, 3748, 4487
MabI ACCWGGT 5 cut(s) 3160, 3196, 3232, 3268, 3801
MaeI CTAG 8 cut(s) 50, 1535, 1578, 1728, 2265, 2334, 3126, 4176
MaeII ACGT 6 cut(s) 72, 228, 1773, 2765, 3436, 4516
MaeIII GTNAC 5 cut(s) 2065, 3505, 4444, 4534, 4540
MfeI CAATTG 1 cut(s) 4286
MflI RGATCY 7 cut(s) 859, 2461, 2823, 3473, 3662, 4223, 4507
MlyI GAGTC 6 cut(s) 457, 508, 2111, 3791, 3944, 4537
MmeI TCCRAC 2 cut(s) 84, 4116
Mph1103I ATGCAT 5 cut(s) 378, 2821, 2856, 2892, 4197
MroXI GAANNNNTTC 1 cut(s) 4409
MslI CAYNNNNRTG 8 cut(s) 98, 768, 852, 1046, 1179, 1322, 1388, 2663
MspA1I CMGCKG 2 cut(s) 1811, 4478
MspI CCGG 4 cut(s) 38, 450, 707, 2413
MssI GTTTAAAC 1 cut(s) 4005
MunI CAATTG 1 cut(s) 4286
Mva1269I GAATGC 2 cut(s) 1570, 1951
MvnI CGCG 1 cut(s) 939
NciI CCSGG 3 cut(s) 451, 2413, 2414
NmeAIII GCCGAG 2 cut(s) 247, 1594
NmuCI GTSAC 4 cut(s) 2065, 3505, 4444, 4540
NsiI ATGCAT 5 cut(s) 378, 2821, 2856, 2892, 4197
NspI RCATGY 2 cut(s) 2024, 4026
NspV TTCGAA 1 cut(s) 4036
OliI CACNNNNGTG 2 cut(s) 98, 1046
PaeI GCATGC 1 cut(s) 4026
PagI TCATGA 3 cut(s) 868, 1447, 2098
PasI CCCWGGG 1 cut(s) 3883
PceI AGGCCT 2 cut(s) 3405, 3983
PctI GAATGC 2 cut(s) 1570, 1951
PdmI GAANNNNTTC 1 cut(s) 4409
PfeI GAWTC 7 cut(s) 307, 1292, 1358, 1735, 1958, 3794, 3964
PflFI GACNNNGTC 2 cut(s) 3677, 4256
PfoI TCCNGGA 2 cut(s) 2711, 3304
PleI GAGTC 6 cut(s) 457, 508, 2110, 3790, 3943, 4537
PmaCI CACGTG 1 cut(s) 2766
PmeI GTTTAAAC 1 cut(s) 4005
PmlI CACGTG 1 cut(s) 2766
PpsI GAGTC 6 cut(s) 457, 508, 2110, 3790, 3943, 4537
Ppu21I YACGTR 1 cut(s) 2766
PpuMI RGGWCCY 1 cut(s) 4252
PshAI GACNNNNGTC 1 cut(s) 3652
Psp124BI GAGCTC 6 cut(s) 2498, 2540, 2621, 2720, 3250, 3313
Psp5II RGGWCCY 1 cut(s) 4252
PspCI CACGTG 1 cut(s) 2766
PspFI CCCAGC 1 cut(s) 147
PspOMI GGGCCC 2 cut(s) 1690, 3448
PspPPI RGGWCCY 1 cut(s) 4252
PsrI GAACNNNNNNTAC 2 cut(s) 2055, 2087
PstNI CAGNNNCTG 4 cut(s) 1079, 1144, 1889, 4351
PsuI RGATCY 7 cut(s) 859, 2461, 2823, 3473, 3662, 4223, 4507
PsyI GACNNNGTC 2 cut(s) 3677, 4256
PvuII CAGCTG 2 cut(s) 1811, 4478
RseI CAYNNNNRTG 8 cut(s) 98, 768, 852, 1046, 1179, 1322, 1388, 2663
SacI GAGCTC 6 cut(s) 2498, 2540, 2621, 2720, 3250, 3313
SalI GTCGAC 1 cut(s) 3689
SchI GAGTC 6 cut(s) 457, 508, 2111, 3791, 3944, 4537
SexAI ACCWGGT 5 cut(s) 3160, 3196, 3232, 3268, 3801
SfcI CTRYAG 3 cut(s) 152, 2403, 3459
SfuI TTCGAA 1 cut(s) 4036
SinI GGWCC 4 cut(s) 3317, 3341, 3356, 4252
SmaI CCCGGG 1 cut(s) 2414
SmiMI CAYNNNNRTG 8 cut(s) 98, 768, 852, 1046, 1179, 1322, 1388, 2663
SmlI CTYRAG 2 cut(s) 3854, 4340
SmoI CTYRAG 2 cut(s) 3854, 4340
SpeI ACTAGT 2 cut(s) 2264, 4175
SphI GCATGC 1 cut(s) 4026
SseBI AGGCCT 2 cut(s) 3405, 3983
SspMI CTAG 8 cut(s) 50, 1535, 1578, 1728, 2265, 2334, 3126, 4176
SstI GAGCTC 6 cut(s) 2498, 2540, 2621, 2720, 3250, 3313
StuI AGGCCT 2 cut(s) 3405, 3983
StyI CCWWGG 4 cut(s) 966, 1901, 4099, 4650
TaiI ACGT 6 cut(s) 75, 231, 1776, 2768, 3439, 4519
TaqII GACCGA 1 cut(s) 3660
TatI WGTACW 5 cut(s) 117, 126, 364, 555, 772
TauI GCSGC 6 cut(s) 37, 1606, 1913, 2911, 2947, 3745
TfiI GAWTC 7 cut(s) 307, 1292, 1358, 1735, 1958, 3794, 3964
TscAI CASTG 7 cut(s) 303, 1173, 1314, 1380, 1807, 3718, 4194
TseFI GTSAC 4 cut(s) 2065, 3505, 4444, 4540
TseI GCWGC 9 cut(s) 84, 292, 538, 1600, 1811, 2138, 2652, 3761, 4475
Tsp45I GTSAC 4 cut(s) 2065, 3505, 4444, 4540
TspGWI ACGGA 3 cut(s) 226, 669, 797
TspMI CCCGGG 1 cut(s) 2412
TspRI CASTG 7 cut(s) 303, 1173, 1314, 1380, 1807, 3718, 4194
Tth111I GACNNNGTC 2 cut(s) 3677, 4256
VneI GTGCAC 2 cut(s) 1803, 2779
VpaK11BI GGWCC 4 cut(s) 3317, 3341, 3356, 4252
XagI CCTNNNNNAGG 5 cut(s) 1746, 2387, 3129, 3165, 3273
XapI RAATTY 8 cut(s) 219, 739, 1094, 1414, 1486, 3575, 3989, 4071
XbaI TCTAGA 2 cut(s) 49, 1577
XceI RCATGY 2 cut(s) 2024, 4026
XcmI CCANNNNNNNNNTGG 2 cut(s) 100, 2382
XmaI CCCGGG 1 cut(s) 2412
XmiI GTMKAC 2 cut(s) 69, 3690
XmnI GAANNNNTTC 1 cut(s) 4409
XspI CTAG 8 cut(s) 50, 1535, 1578, 1728, 2265, 2334, 3126, 4176
Zsp2I ATGCAT 5 cut(s) 378, 2821, 2856, 2892, 4197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.