Rroxscaffold_3G00271450

Belongs to the formin-like family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
63785366 .. 63796260
10895 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00271450.1

Sequence Viewer

Length: 4953 bp
ATGGCGCTGTTCCGAAGGTTCTTTTATCGGAAGCCGCCGGATCGGCTTCTAGAGATTTCTGAACGGGTCTACGCGTCTTTTTGCCTAATTCAGCTGAAGCTTTGCTTCAATGGTAATGATGAGACTGAATATGATGAAACCAGTTGGGGCAGAGCTGTAGAGTTGCAAGAAAAGTTGAAGGAATTGAATTTCAGTGCTTATGTAGTGAAAAACTCTGAAGCCAAATTATACCGTATTGTTTTTGACTGCTGCTTCTCCACCGATGTGTTGGAAGAAGATGAGTACAAAGTGTACTTGGGTGGCATTGTAGCCCAGCTACAGGACTACTTCCCTGATGCTTCTTTCATGGTGTTTAACTTTAGAGAAGGGGAGAGACGGAGCCAAATTTCAGACGTACTGTCCCAGTATGACATGACAGTTATGGATTACCCTCGGCAATATGAGAGTTGCCCATTGCTGCCACTGGAGATGATTCATCACTTTCTTCGATCAAGTGAAAGTTGGTTGTCATTGGAGGGGCAACAGAATGTACTGCTGATGCATTGTGAAAGAGGAGGATGGCCTGTGCTTGCCTTTATGCTTGCAGGTCTTTTGCTATACCGTAAAAATTACACCGGGGAGCAGAAGACTCTTGATATGGTTTACAAGCAGGCTCCTAAACAGCTTCTCCATCTGTTGACTCCTTTAAACCCACAGCCCTCGCAGCTTAGATATCTTCAGTACATTTCACGAAGAAATCTGGGTGCTGATTGGCCTCCATCAGATACACCTCTATTTTTGGATTGTCTGATACTTAGAAACCTTCCACTTTTTGATGACGGAAAAGGTTGCAGGCCCTTCATACGAGTTTATGGTCAAGACCCTTCAACACCGGCTAACAGAAGTTCTAAGCTTCTCTTTTCAAATTTAAAGACTAAAAACAATACTCACCACTATGTACAGGCAGAGTGTATGCTGGTGAAAATGGATATCCGTTGTCGTGTTCGAGGGGATGTGGTAGTCGAGTGTATCCACCTGGATGAAGATCTGGTTCATGAGGAGATGATGTTCAGGGTTATGTTTCACACAGCATTTGTACGGTCAAATATATTGATGCTCAACCGTGACGATATTGATATTCTTTGGGATGCCAAGGAACAGTTCTCAAAGGACTTCAGATCGGAGGTACTTTTTTTGGACGCTGATGCTGTTGTGCCTAATCTCACCACAGTTGTGGCAAGTGATGATGGAAATGAGACAGGGACTGCTTCACCTGAGGAATTTTATGAGGTGGAAGAAATCTTCAGCAATGCCATAGATGGACAGGAACTGAAGTTGGCATTTGATACTGCACTGGTTCACAACAATGCACCTGAAAATATAGATCCGAAAGAAGTCTGGAAGGAGGATTTAGAGCCTCACTCATTCCAAGACTGTGCGTCAGATGATGGGAACCACAAAAAGGACAGAAATGTGGATTCTACAACTGATGCGGTGAAGGACATTGCTGTGGATGATGTGAAATACAAGCTGGAAGAGGTGGATTCCAATCTGGACGCAGTGAAAGACATTGCTGTGGATGATGGGGATACAAACTCGAATTTCATCTTAATTTCTGCTGATATTCCAAGTCATGAAGGAACTAAGGAAGTGGCAGAAGAGGTATGTGAAAATTTGGAAGAGATGATAGATATAACTGATGGAGAAGACACTTCTACTCAGAAGCTAGAGACCAAGCTCAGACAAGAAAAACTGAATGAGGTCTCTAGACAAAAATCTGAGAAATTGCAGCCGCCTACTTCTAAGCCTGTATTGAACACAAAAACAGGTTCAGAAACAACGCTTACAAAACAGAAGGCTAAACAGCAAGAGACTCAGGGCCCTTCAGCAAGAGTAGCAAAACCAAATGCTGTATCTAGGTGGATTCCTCCTAACAAAGGCTCACATACTAATTCAATGCACGTTTCATATCCACCGTCAAGATATAACAGTGCACCAGCTGCTTTTGCCAATAATACTTCTTCAAAAGATACAAATGCAAACCCCAAATTGAAGGCTTCTGCTGTTAATACTGCATCCGGAACTGCACCAAGGGATGCGGCAAGTAAACTGAAAAATAGCAATGTTGATCCTTTAAAGCATTCAGAATCAGCACCAGACACACTTGTATCCTGCCTGCCATCAGCAGTTCCTCCAAATCAAGAGACACATGCTTCCTCTGTTTCTACGCCACATATTAGCCCACAGCAAGTAGTGGCTATTCCACCTCCTCCTCCTCCTCCACCTCATGAGTCTTTCTCACCAGCTACCCCATCTTTGCAGGTAGCTGCACCAGCAACTACTCCATCACCTCCTCCTCCTCCTCCACCACCACCTCCTTTACTAAGTAGTAATGTAGTGTCGTTAAAGCCCCCTTCTTCTCCCCCACCACCTCCGCCTCCACCTACTAGTGGGCAGGATACTGTTATACCTGTGCCCCCTATAATTCCACCTCCTCCTCCTCCCTCTGTTAAAGCTAGTGGCAAAAATGGTGGCCCCATATTGCCTTCACAACTTCCATCATCCCTTTGGAAGGTTGGGTACTCTACAGCCTCCCGGGGTTTGGTGGGAAGTACTCAACCATCTCCCCCACCTCCTGCACCTCTTTCTGTTCAGGATGCTTTAAGTGCATTGAAACTTAGTGTTGGGATCCCTACACCACCACCACCACCACCACCTCCCACACATGGAGCTCCACCACCGCCGCCACCACCCCCACCTCTTTCACGTGGAGCTCCATCTCCACCACCACCGCCACCACCGCCTCCAATGCAAGGAACTATACCTCCACCACCTCCACCTCCCTTACATGGAGCTCCGCCTCCCCCACCCCCTCCTCCTCCGTATGCAGCTCCACCACCATGTTTAGTGCAAGGTGCTCCATCTCCACCTCCTCCACCACCACTTCCAGGAGCTCCACCTCCGCCACCACCTCCTCCTTCTTATGGGGCTCAGCCACCACGTGTAGTGCAAGGTGCACCATCTCCACCTCCTCCGCCACCACCTCCAATGCATGGATCCCCACCTCCGCCGCCACCACCTCCAATGTACGGTGCCCCACCCCTCCGCCACCTCCAATGTACGGTGCCCCACCCCCTCCACCCTCCAATGTACGGTGCCCCACCCTCCACCCCCTCCAATGTATGGTGCCTCACCTCCTCCACCCCCGCAATGCGTGGGGCGCCACCCCCACCTCCCCCACCTCCTAGTGGAGGTCGGGCACCCCCACCTCCCCCACCACCTGGTGGAAGTCAAGCACCCCCACCTCCCCCGCCACCTGGAGCTCGTGGTCCTGGGCCTCCTGCTCCACCTGGACCTCCAGGTGGTGGTCCACCACCACCACCTCCATTGGGTGCCAAAGTTAATGATGCAAGAGGCCTTTCTTCTGGAAGAGGGCGTGGATTTCCACGTCCAGGGATGGGCCCCTCTGCTACAGCGCCTCGAAGATCCTCATTAAAACCACTACATTGGAGCAAGGTGACAAGGGCATTGCAAGGAAGCTTATGGGAAGAACTGCAAAGACATGGAGGAAATCAAATACTTCCTCTTTACTGCTTGCAGTCAATAATTGGAATCATCCACGTTTTAGGTCCTACAAGGATGATCATTGCCAATAATCAGCCAAATCTTAGATATTCTGTTTATCTGCACAATATGGATGACCAAATGGCTTCCAATAGGCTGATTATTTGCAATGCACCTGAATTTGATGTGTCAGAGATAGAGAGCCTTTTCTCTGCAACAGTTCCAAAACCTGCTAACAAATCTGGAGACCGACGCAAGTCTGCTGGATCCAAACCTGACAAAGTCCACTTGATCGACCTGAGAAGGGCAAACAACACTGAAATTATGCTCACAAAAGTTAAGATGCCGCTTCCTGATATGATGGCTGCTGTCTTAGCAATGGATGAGTCGGTATTAGATTCTGACCAGGTGGAAAATCTAATTAAGTTTTGTCCTACTAAAGAGGAAATGGAACTTCTCAAGAACTATACTGGTGACAAGGAGACCCTGGGGAAGTGTGAACAGTATTTTTTGGAGTTGATGAAAGTGCCTCGGGTGGAGTCAAAACTAAGAGTATTTTCTTTCAAGATTCAGTTCAGCTCACAGGCCTCAGAATTCAAAAAAAGTTTGAACACAGTAAACTCTGCATGCGAGGAGGTTCGAACTTCTGAAAAGTTCAAGGAAATTATGAAGAAAATTCTTTTTCTGGGGAATACATTGAACCAAGGAACTGCAAGGGGTTCTGCTGTTGGGTTCAAGTTGGACAGTCTTCTGAAGCTCTCTGATACTCGTGCTTCAACTAGTAAGATGACACTCATGCATTATCTCTGTAAGGGTCTTGCTTCCAGATCTCCTGAACTTCTTGGTTTTCATCAGGACCTTGTCAACCTGGAACCTGCAACAAAGATACAATTGAAGTCTTTAGCAGAAGAAATGCAAGCTTTAATCAAGGGGTTAGAAAAGCTCAAGCAGGAGCTTGTGGCATCAGAAAGTGATGGCCCTGTTTCAGAGGTTTTTCGTAAGACATTGAAGGAGTTCATTACTGTTGCTGAGACTGAAGTGGCATCTGTGACGAACCTATATTCTGTGGTGGGTAGAGCAGCTGATCAACTGGCATTATATTTTGGTGAGGATCCTGCACGTTGCCCATTTGAGCAAGTTACTGTGACTCTCTTAAACTTTGTGAGGTTGTTTAAGAAAGCACACGAAGAGAATTGCAAACAGGCTGAATTGGATAAGAAGAAAGCTGAGAAGGAAGCGGAAATGGAAAAGGCCAAGGACCGGACTTTGGCACTGCTTTCATTCGACAGCTCTCAATCATTAATTGAGAAGCAACAGTTTCCCTACAGCCTTGGCAATATGGTTCCGGCTTTGATCACTCGAGCTGCTCAGATTCTATGGCACCAGGGAAAGATGCCATCGGGATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1650

Amino Acids

180.07

Weight (kDa)

6.28

Isoelectric Point (pI)

60.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTEN_C2 PF10409 254 - 391 3e-36 C2 domain of PTEN tumour-suppressor protein
FH2 PF02181 1153 - 1573 1.5e-112 Formin Homology 2 Domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 4 cut(s) 575, 2290, 3781, 4426
AccB1I GGYRCC 8 cut(s) 3071, 3103, 3134, 3165, 3199, 3238, 3371, 4923
AccB7I CCANNNNNTGG 5 cut(s) 3032, 3162, 3260, 3263, 3344
AccI GTMKAC 1 cut(s) 69
AccII CGCG 1 cut(s) 74
AccIII TCCGGA 1 cut(s) 2057
AcsI RAATTY 9 cut(s) 187, 384, 904, 1259, 1579, 1651, 3722, 4136, 4218
AcuI CTGAAG 9 cut(s) 116, 237, 701, 1138, 1267, 1331, 1848, 4316, 4599
AcvI CACGTG 2 cut(s) 2747, 2981
AcyI GRCGYC 1 cut(s) 3200
AdeI CACNNNGTG 2 cut(s) 2981, 3263
AflIII ACRYGT 2 cut(s) 72, 2980
AhdI GACNNNNNGTC 2 cut(s) 397, 1417
AhlI ACTAGT 2 cut(s) 2426, 4322
AjiI CACGTC 1 cut(s) 3428
AjuI GAANNNNNNNTTGG 2 cut(s) 1124, 1156
AleI CACNNNNGTG 2 cut(s) 263, 1211
AloI GAACNNNNNNTCC 4 cut(s) 1031, 1063, 2788, 2820
Alw21I GWGCWC 8 cut(s) 1975, 2713, 2755, 2836, 2899, 2935, 2998, 3304
Alw44I GTGCAC 2 cut(s) 1971, 2994
AlwNI CAGNNNCTG 2 cut(s) 1244, 1309
Ama87I CYCGRG 3 cut(s) 2574, 4074, 4902
Aor13HI TCCGGA 1 cut(s) 2057
ApaI GGGCCC 2 cut(s) 1862, 3443
ApaLI GTGCAC 2 cut(s) 1971, 2994
ApoI RAATTY 9 cut(s) 187, 384, 904, 1259, 1579, 1651, 3722, 4136, 4218
AseI ATTAAT 1 cut(s) 4844
Asp700I GAANNNNTTC 1 cut(s) 4556
AspLEI GCGC 3 cut(s) 7, 3202, 3457
AsuC2I CCSGG 3 cut(s) 616, 2575, 2576
AsuII TTCGAA 1 cut(s) 4183
AvaI CYCGRG 3 cut(s) 2574, 4074, 4902
AvaII GGWCC 6 cut(s) 3308, 3332, 3347, 3608, 4399, 4801
AxyI CCTNAGG 1 cut(s) 1254
BaeGI GKGCMC 9 cut(s) 1862, 1975, 2457, 2998, 3076, 3108, 3139, 3241, 3443
BaeI ACNNNNGTAYC 2 cut(s) 2130, 2163
BamHI GGATCC 4 cut(s) 2667, 3035, 3809, 4654
BanI GGYRCC 8 cut(s) 3071, 3103, 3134, 3165, 3199, 3238, 3371, 4923
BanII GRGCYC 8 cut(s) 1862, 2713, 2755, 2836, 2935, 2971, 3304, 3443
BarI GAAGNNNNNNTAC 2 cut(s) 2543, 2575
BauI CACGAG 2 cut(s) 3303, 4311
BbrPI CACGTG 2 cut(s) 2747, 2981
BbsI GAAGAC 3 cut(s) 632, 1692, 4283
Bbv12I GWGCWC 8 cut(s) 1975, 2713, 2755, 2836, 2899, 2935, 2998, 3304
BciVI GTATCC 4 cut(s) 1019, 1561, 2158, 2431
BclI TGATCA 3 cut(s) 3621, 4627, 4896
BcnI CCSGG 3 cut(s) 616, 2575, 2576
BcuI ACTAGT 2 cut(s) 2426, 4322
BfaI CTAG 8 cut(s) 50, 1706, 1746, 1896, 2427, 2496, 3225, 4323
BfmI CTRYAG 5 cut(s) 156, 317, 2565, 3450, 4867
BfoI RGCGCY 3 cut(s) 8, 3203, 3458
BfuAI ACCTGC 4 cut(s) 575, 2290, 3781, 4426
BfuI GTATCC 4 cut(s) 1019, 1561, 2158, 2431
BglI GCCNNNNNGGC 1 cut(s) 43
BglII AGATCT 2 cut(s) 1024, 4370
BlpI GCTNAGC 1 cut(s) 2970
BmcAI AGTACT 1 cut(s) 2593
Bme18I GGWCC 6 cut(s) 3308, 3332, 3347, 3608, 4399, 4801
BmeRI GACNNNNNGTC 2 cut(s) 397, 1417
BmeT110I CYCGRG 3 cut(s) 2574, 4074, 4902
BmgBI CACGTC 1 cut(s) 3428
BmrI ACTGGG 1 cut(s) 397
BmuI ACTGGG 1 cut(s) 397
BoxI GACNNNNGTC 1 cut(s) 3799
BpiI GAAGAC 3 cut(s) 632, 1692, 4283
BplI GAGNNNNNCTC 4 cut(s) 1385, 1417, 2261, 2293
BpmI CTGGAG 4 cut(s) 485, 3318, 3321, 3807
Bpu1102I GCTNAGC 1 cut(s) 2970
Bpu14I TTCGAA 1 cut(s) 4183
BpuEI CTTGAG 2 cut(s) 3986, 4472
BpuMI CCSGG 3 cut(s) 616, 2575, 2576
BsaAI YACGTR 2 cut(s) 2747, 2981
BsaBI GATNNNNATC 2 cut(s) 1023, 1527
BsaHI GRCGYC 1 cut(s) 3200
BsaI GGTCTC 4 cut(s) 1703, 1747, 3783, 4019
BsaWI WCCGGW 2 cut(s) 2057, 4803
BsaXI ACNNNNNCTCC 6 cut(s) 651, 681, 1031, 1061, 2788, 2818
Bse118I RCCGGY 1 cut(s) 871
Bse1I ACTGG 6 cut(s) 141, 403, 468, 1338, 4018, 4638
Bse21I CCTNAGG 1 cut(s) 1254
Bse8I GATNNNNATC 2 cut(s) 1023, 1527
BseAI TCCGGA 1 cut(s) 2057
BseJI GATNNNNATC 2 cut(s) 1023, 1527
BseNI ACTGG 6 cut(s) 141, 403, 468, 1338, 4018, 4638
BseSI GKGCMC 9 cut(s) 1862, 1975, 2457, 2998, 3076, 3108, 3139, 3241, 3443
BseYI CCCAGC 1 cut(s) 312
BsgI GTGCAG 6 cut(s) 1314, 2049, 2292, 2601, 3650, 4644
Bsh1236I CGCG 1 cut(s) 74
BshNI GGYRCC 8 cut(s) 3071, 3103, 3134, 3165, 3199, 3238, 3371, 4923
BsiHKAI GWGCWC 8 cut(s) 1975, 2713, 2755, 2836, 2899, 2935, 2998, 3304
BsiHKCI CYCGRG 3 cut(s) 2574, 4074, 4902
BsiSI CCGG 7 cut(s) 38, 615, 872, 2058, 2575, 4804, 4889
BslFI GGGAC 2 cut(s) 385, 1255
BsmBI CGTCTC 1 cut(s) 367
BsmFI GGGAC 2 cut(s) 385, 1255
BsmI GAATGC 1 cut(s) 2119
Bso31I GGTCTC 4 cut(s) 1703, 1747, 3783, 4019
BsoBI CYCGRG 3 cut(s) 2574, 4074, 4902
Bsp119I TTCGAA 1 cut(s) 4183
Bsp120I GGGCCC 2 cut(s) 1858, 3439
Bsp13I TCCGGA 1 cut(s) 2057
Bsp1407I TGTACA 1 cut(s) 937
Bsp1720I GCTNAGC 1 cut(s) 2970
BspEI TCCGGA 1 cut(s) 2057
BspFNI CGCG 1 cut(s) 74
BspHI TCATGA 3 cut(s) 1033, 1612, 2266
BspMI ACCTGC 4 cut(s) 575, 2290, 3781, 4426
BspT104I TTCGAA 1 cut(s) 4183
BspT107I GGYRCC 8 cut(s) 3071, 3103, 3134, 3165, 3199, 3238, 3371, 4923
BspTNI GGTCTC 4 cut(s) 1703, 1747, 3783, 4019
BsrFI RCCGGY 1 cut(s) 871
BsrGI TGTACA 1 cut(s) 937
BsrI ACTGG 6 cut(s) 141, 403, 468, 1338, 4018, 4638
BssAI RCCGGY 1 cut(s) 871
BssNI GRCGYC 1 cut(s) 3200
BssSI CACGAG 2 cut(s) 3303, 4311
BssT1I CCWWGG 5 cut(s) 1131, 2069, 4246, 4797, 4873
Bst2BI CACGAG 2 cut(s) 3303, 4311
Bst6I CTCTTC 5 cut(s) 1509, 1632, 1653, 3403, 4725
BstACI GRCGYC 1 cut(s) 3200
BstAPI GCANNNNNTGC 1 cut(s) 1979
BstAUI TGTACA 1 cut(s) 937
BstBAI YACGTR 2 cut(s) 2747, 2981
BstBI TTCGAA 1 cut(s) 4183
BstC8I GCNNGC 8 cut(s) 570, 582, 651, 833, 2156, 3575, 4171, 4461
BstENI CCTNNNNNAGG 3 cut(s) 1914, 2549, 3228
BstFNI CGCG 1 cut(s) 74
BstH2I RGCGCY 3 cut(s) 8, 3203, 3458
BstHHI GCGC 3 cut(s) 7, 3202, 3457
BstNSI RCATGY 2 cut(s) 2192, 4173
BstPAI GACNNNNGTC 1 cut(s) 3799
BstSFI CTRYAG 5 cut(s) 156, 317, 2565, 3450, 4867
BstSLI GKGCMC 9 cut(s) 1862, 1975, 2457, 2998, 3076, 3108, 3139, 3241, 3443
BstUI CGCG 1 cut(s) 74
BstV2I GAAGAC 3 cut(s) 632, 1692, 4283
BstX2I RGATCY 8 cut(s) 1024, 1363, 2667, 3035, 3464, 3809, 4370, 4654
BstXI CCANNNNNNTGG 2 cut(s) 1213, 3486
BstYI RGATCY 8 cut(s) 1024, 1363, 2667, 3035, 3464, 3809, 4370, 4654
Bsu36I CCTNAGG 1 cut(s) 1254
BsuI GTATCC 4 cut(s) 1019, 1561, 2158, 2431
BtrI CACGTC 1 cut(s) 3428
BtsI GCAGTG 2 cut(s) 1545, 4814
BtsIMutI CAGTG 7 cut(s) 199, 461, 1331, 1545, 1975, 3858, 4814
BveI ACCTGC 4 cut(s) 575, 2290, 3781, 4426
Cac8I GCNNGC 8 cut(s) 570, 582, 651, 833, 2156, 3575, 4171, 4461
CaiI CAGNNNCTG 2 cut(s) 1244, 1309
CciI TCATGA 3 cut(s) 1033, 1612, 2266
CfoI GCGC 3 cut(s) 7, 3202, 3457
Cfr10I RCCGGY 1 cut(s) 871
Cfr9I CCCGGG 1 cut(s) 2574
CseI GACGC 5 cut(s) 63, 1187, 1407, 1544, 3804
CsiI ACCWGGT 2 cut(s) 3259, 3948
CspCI CAANNNNNGTGG 4 cut(s) 2491, 2526, 3348, 3383
DinI GGCGCC 1 cut(s) 3201
DraI TTTAAA 3 cut(s) 687, 909, 2115
DraIII CACNNNGTG 2 cut(s) 2981, 3263
DriI GACNNNNNGTC 2 cut(s) 397, 1417
Eam1104I CTCTTC 5 cut(s) 1509, 1632, 1653, 3403, 4725
Eam1105I GACNNNNNGTC 2 cut(s) 397, 1417
EarI CTCTTC 5 cut(s) 1509, 1632, 1653, 3403, 4725
EciI GGCGGA 6 cut(s) 2403, 2826, 2931, 3003, 3036, 3074
Ecl136II GAGCTC 5 cut(s) 2711, 2753, 2834, 2933, 3302
Eco130I CCWWGG 5 cut(s) 1131, 2069, 4246, 4797, 4873
Eco147I AGGCCT 2 cut(s) 3396, 4130
Eco24I GRGCYC 8 cut(s) 1862, 2713, 2755, 2836, 2935, 2971, 3304, 3443
Eco31I GGTCTC 4 cut(s) 1703, 1747, 3783, 4019
Eco32I GATATC 2 cut(s) 713, 970
Eco47I GGWCC 6 cut(s) 3308, 3332, 3347, 3608, 4399, 4801
Eco53kI GAGCTC 5 cut(s) 2711, 2753, 2834, 2933, 3302
Eco57I CTGAAG 9 cut(s) 116, 237, 701, 1138, 1267, 1331, 1848, 4316, 4599
Eco72I CACGTG 2 cut(s) 2747, 2981
Eco81I CCTNAGG 1 cut(s) 1254
Eco88I CYCGRG 3 cut(s) 2574, 4074, 4902
EcoICRI GAGCTC 5 cut(s) 2711, 2753, 2834, 2933, 3302
EcoNI CCTNNNNNAGG 3 cut(s) 1914, 2549, 3228
EcoO109I RGGNCCY 6 cut(s) 834, 1858, 1859, 3440, 3608, 4399
EcoRI GAATTC 1 cut(s) 4136
EcoRV GATATC 2 cut(s) 713, 970
EcoT14I CCWWGG 5 cut(s) 1131, 2069, 4246, 4797, 4873
EcoT22I ATGCAT 3 cut(s) 543, 3033, 4344
EcoT38I GRGCYC 8 cut(s) 1862, 2713, 2755, 2836, 2935, 2971, 3304, 3443
EgeI GGCGCC 1 cut(s) 3201
EheI GGCGCC 1 cut(s) 3201
ErhI CCWWGG 5 cut(s) 1131, 2069, 4246, 4797, 4873
Esp3I CGTCTC 1 cut(s) 367
FalI AAGNNNNNCTT 4 cut(s) 89, 121, 881, 913
FaqI GGGAC 2 cut(s) 385, 1255
FauI CCCGC 2 cut(s) 3193, 3297
FbaI TGATCA 3 cut(s) 3621, 4627, 4896
FblI GTMKAC 1 cut(s) 69
FriOI GRGCYC 8 cut(s) 1862, 2713, 2755, 2836, 2935, 2971, 3304, 3443
FspBI CTAG 8 cut(s) 50, 1706, 1746, 1896, 2427, 2496, 3225, 4323
GlaI GCGC 3 cut(s) 6, 3201, 3456
GsaI CCCAGC 1 cut(s) 316
GsuI CTGGAG 4 cut(s) 485, 3318, 3321, 3807
HaeII RGCGCY 3 cut(s) 8, 3203, 3458
HapII CCGG 7 cut(s) 38, 615, 872, 2058, 2575, 4804, 4889
HgaI GACGC 5 cut(s) 63, 1187, 1407, 1544, 3804
HhaI GCGC 3 cut(s) 7, 3202, 3457
Hin1I GRCGYC 1 cut(s) 3200
Hin6I GCGC 3 cut(s) 5, 3200, 3455
HinP1I GCGC 3 cut(s) 5, 3200, 3455
HincII GTYRAC 2 cut(s) 678, 4408
HindII GTYRAC 2 cut(s) 678, 4408
HindIII AAGCTT 4 cut(s) 98, 890, 3517, 4461
HpaII CCGG 7 cut(s) 38, 615, 872, 2058, 2575, 4804, 4889
Hpy99I CGWCG 1 cut(s) 3798
HpyCH4IV ACGT 7 cut(s) 393, 1941, 2746, 2980, 3427, 3600, 4663
HpySE526I ACGT 7 cut(s) 393, 1941, 2746, 2980, 3427, 3600, 4663
Hsp92I GRCGYC 1 cut(s) 3200
HspAI GCGC 3 cut(s) 5, 3200, 3455
KasI GGCGCC 1 cut(s) 3199
Kpn2I TCCGGA 1 cut(s) 2057
Ksp22I TGATCA 3 cut(s) 3621, 4627, 4896
MabI ACCWGGT 2 cut(s) 3259, 3948
MaeI CTAG 8 cut(s) 50, 1706, 1746, 1896, 2427, 2496, 3225, 4323
MaeII ACGT 7 cut(s) 393, 1941, 2746, 2980, 3427, 3600, 4663
MaeIII GTNAC 6 cut(s) 1103, 3496, 4016, 4591, 4681, 4687
MfeI CAATTG 1 cut(s) 4433
MflI RGATCY 8 cut(s) 1024, 1363, 2667, 3035, 3464, 3809, 4370, 4654
MluI ACGCGT 1 cut(s) 72
Mly113I GGCGCC 1 cut(s) 3200
MlyI GAGTC 7 cut(s) 622, 673, 1846, 2279, 3938, 4091, 4684
MmeI TCCRAC 2 cut(s) 249, 4263
Mph1103I ATGCAT 3 cut(s) 543, 3033, 4344
MroI TCCGGA 1 cut(s) 2057
MroXI GAANNNNTTC 1 cut(s) 4556
MslI CAYNNNNRTG 8 cut(s) 263, 933, 1017, 1211, 1344, 1487, 1553, 2878
MspA1I CMGCKG 3 cut(s) 94, 1979, 4625
MspI CCGG 7 cut(s) 38, 615, 872, 2058, 2575, 4804, 4889
MunI CAATTG 1 cut(s) 4433
Mva1269I GAATGC 1 cut(s) 2119
MvnI CGCG 1 cut(s) 74
NarI GGCGCC 1 cut(s) 3200
NciI CCSGG 3 cut(s) 616, 2575, 2576
NmeAIII GCCGAG 1 cut(s) 412
NmuCI GTSAC 5 cut(s) 1103, 3496, 4016, 4591, 4687
NsiI ATGCAT 3 cut(s) 543, 3033, 4344
NspI RCATGY 2 cut(s) 2192, 4173
NspV TTCGAA 1 cut(s) 4183
OliI CACNNNNGTG 2 cut(s) 263, 1211
PaeI GCATGC 1 cut(s) 4173
PaeR7I CTCGAG 1 cut(s) 4902
PagI TCATGA 3 cut(s) 1033, 1612, 2266
PasI CCCWGGG 1 cut(s) 4030
PceI AGGCCT 2 cut(s) 3396, 4130
PctI GAATGC 1 cut(s) 2119
PdmI GAANNNNTTC 1 cut(s) 4556
PfeI GAWTC 9 cut(s) 472, 1457, 1523, 1903, 2126, 3591, 3941, 4111, 4915
PflFI GACNNNGTC 2 cut(s) 3824, 4403
PflMI CCANNNNNTGG 5 cut(s) 3032, 3162, 3260, 3263, 3344
PfoI TCCNGGA 1 cut(s) 2926
PleI GAGTC 7 cut(s) 622, 673, 1846, 2278, 3937, 4090, 4684
PluTI GGCGCC 1 cut(s) 3203
PmaCI CACGTG 2 cut(s) 2747, 2981
PmlI CACGTG 2 cut(s) 2747, 2981
PpsI GAGTC 7 cut(s) 622, 673, 1846, 2278, 3937, 4090, 4684
Ppu21I YACGTR 2 cut(s) 2747, 2981
PpuMI RGGWCCY 2 cut(s) 3608, 4399
PshAI GACNNNNGTC 1 cut(s) 3799
PshBI ATTAAT 1 cut(s) 4844
Psp124BI GAGCTC 5 cut(s) 2713, 2755, 2836, 2935, 3304
Psp5II RGGWCCY 2 cut(s) 3608, 4399
PspCI CACGTG 2 cut(s) 2747, 2981
PspFI CCCAGC 1 cut(s) 312
PspOMI GGGCCC 2 cut(s) 1858, 3439
PspPPI RGGWCCY 2 cut(s) 3608, 4399
PspXI VCTCGAGB 1 cut(s) 4902
PstNI CAGNNNCTG 2 cut(s) 1244, 1309
PsuI RGATCY 8 cut(s) 1024, 1363, 2667, 3035, 3464, 3809, 4370, 4654
PsyI GACNNNGTC 2 cut(s) 3824, 4403
PvuII CAGCTG 3 cut(s) 94, 1979, 4625
RseI CAYNNNNRTG 8 cut(s) 263, 933, 1017, 1211, 1344, 1487, 1553, 2878
SacI GAGCTC 5 cut(s) 2713, 2755, 2836, 2935, 3304
ScaI AGTACT 1 cut(s) 2593
SchI GAGTC 7 cut(s) 622, 673, 1846, 2279, 3938, 4091, 4684
SexAI ACCWGGT 2 cut(s) 3259, 3948
SfcI CTRYAG 5 cut(s) 156, 317, 2565, 3450, 4867
SfoI GGCGCC 1 cut(s) 3201
Sfr274I CTCGAG 1 cut(s) 4902
SfuI TTCGAA 1 cut(s) 4183
SinI GGWCC 6 cut(s) 3308, 3332, 3347, 3608, 4399, 4801
SlaI CTCGAG 1 cut(s) 4902
SmaI CCCGGG 1 cut(s) 2576
SmiMI CAYNNNNRTG 8 cut(s) 263, 933, 1017, 1211, 1344, 1487, 1553, 2878
SmlI CTYRAG 3 cut(s) 4001, 4487, 4902
SmoI CTYRAG 3 cut(s) 4001, 4487, 4902
SpeI ACTAGT 2 cut(s) 2426, 4322
SphI GCATGC 1 cut(s) 4173
SseBI AGGCCT 2 cut(s) 3396, 4130
SspDI GGCGCC 1 cut(s) 3199
SspMI CTAG 8 cut(s) 50, 1706, 1746, 1896, 2427, 2496, 3225, 4323
SstI GAGCTC 5 cut(s) 2713, 2755, 2836, 2935, 3304
StuI AGGCCT 2 cut(s) 3396, 4130
StyI CCWWGG 5 cut(s) 1131, 2069, 4246, 4797, 4873
TaiI ACGT 7 cut(s) 396, 1944, 2749, 2983, 3430, 3603, 4666
TaqI TCGA 9 cut(s) 487, 985, 1002, 1577, 3460, 3837, 4183, 4827, 4903
TaqII GACCGA 1 cut(s) 3807
TatI WGTACW 6 cut(s) 282, 291, 529, 720, 937, 2591
TauI GCSGC 6 cut(s) 37, 1774, 2081, 2725, 3052, 3892
TfiI GAWTC 9 cut(s) 472, 1457, 1523, 1903, 2126, 3591, 3941, 4111, 4915
TscAI CASTG 7 cut(s) 199, 468, 1338, 1545, 1975, 3865, 4821
TseFI GTSAC 5 cut(s) 1103, 3496, 4016, 4591, 4687
Tsp45I GTSAC 5 cut(s) 1103, 3496, 4016, 4591, 4687
TspGWI ACGGA 4 cut(s) 391, 834, 962, 2850
TspMI CCCGGG 1 cut(s) 2574
TspRI CASTG 7 cut(s) 199, 468, 1338, 1545, 1975, 3865, 4821
Tth111I GACNNNGTC 2 cut(s) 3824, 4403
Van91I CCANNNNNTGG 5 cut(s) 3032, 3162, 3260, 3263, 3344
VneI GTGCAC 2 cut(s) 1971, 2994
VpaK11BI GGWCC 6 cut(s) 3308, 3332, 3347, 3608, 4399, 4801
VspI ATTAAT 1 cut(s) 4844
XagI CCTNNNNNAGG 3 cut(s) 1914, 2549, 3228
XapI RAATTY 9 cut(s) 187, 384, 904, 1259, 1579, 1651, 3722, 4136, 4218
XbaI TCTAGA 2 cut(s) 49, 1745
XceI RCATGY 2 cut(s) 2192, 4173
XcmI CCANNNNNNNNNTGG 2 cut(s) 265, 2544
XhoI CTCGAG 1 cut(s) 4902
XmaI CCCGGG 1 cut(s) 2574
XmiI GTMKAC 1 cut(s) 69
XmnI GAANNNNTTC 1 cut(s) 4556
XspI CTAG 8 cut(s) 50, 1706, 1746, 1896, 2427, 2496, 3225, 4323
ZrmI AGTACT 1 cut(s) 2593
Zsp2I ATGCAT 3 cut(s) 543, 3033, 4344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.