Pfam:UBN2_2
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr0c22g0500421 RchiOBHm_Chr7g0206941 RchiOBHm_Chr7g0207211 RchiOBHm_Chr7g0207221 |
| rosa_samantha | Rh7DG237700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 159 |
| AccB1I | GGYRCC | 1 cut(s) | 159 |
| AccI | GTMKAC | 1 cut(s) | 238 |
| AclWI | GGATC | 1 cut(s) | 104 |
| AcsI | RAATTY | 1 cut(s) | 287 |
| AfaI | GTAC | 2 cut(s) | 161, 677 |
| AflII | CTTAAG | 1 cut(s) | 101 |
| AflIII | ACRYGT | 2 cut(s) | 618, 795 |
| AgsI | TTSAA | 7 cut(s) | 25, 292, 434, 473, 562, 730, 737 |
| AluBI | AGCT | 5 cut(s) | 67, 119, 224, 308, 401 |
| AluI | AGCT | 5 cut(s) | 67, 119, 224, 308, 401 |
| Alw26I | GTCTC | 1 cut(s) | 771 |
| AlwI | GGATC | 1 cut(s) | 104 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 224 |
| ApeKI | GCWGC | 2 cut(s) | 67, 401 |
| ApoI | RAATTY | 1 cut(s) | 287 |
| Asp718I | GGTACC | 1 cut(s) | 159 |
| AspS9I | GGNCC | 2 cut(s) | 415, 665 |
| AvaII | GGWCC | 2 cut(s) | 415, 665 |
| BanI | GGYRCC | 1 cut(s) | 159 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 143, 175 |
| BbsI | GAAGAC | 1 cut(s) | 441 |
| BbvI | GCAGC | 2 cut(s) | 54, 388 |
| BccI | CCATC | 5 cut(s) | 10, 171, 347, 547, 762 |
| BcoDI | GTCTC | 1 cut(s) | 771 |
| BfaI | CTAG | 2 cut(s) | 194, 258 |
| BfrI | CTTAAG | 1 cut(s) | 101 |
| BisI | GCNGC | 2 cut(s) | 68, 402 |
| BlsI | GCNGC | 2 cut(s) | 69, 403 |
| Bme18I | GGWCC | 2 cut(s) | 415, 665 |
| BmgT120I | GGNCC | 2 cut(s) | 415, 665 |
| BmiI | GGNNCC | 1 cut(s) | 161 |
| BmsI | GCATC | 1 cut(s) | 625 |
| BpiI | GAAGAC | 1 cut(s) | 441 |
| BpuEI | CTTGAG | 2 cut(s) | 395, 442 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 36, 66, 573, 603, 756, 786 |
| Bse3DI | GCAATG | 1 cut(s) | 543 |
| BseGI | GGATG | 3 cut(s) | 61, 151, 640 |
| BseMI | GCAATG | 1 cut(s) | 543 |
| BseMII | CTCAG | 2 cut(s) | 234, 240 |
| BseRI | GAGGAG | 1 cut(s) | 619 |
| BseXI | GCAGC | 2 cut(s) | 54, 388 |
| BshNI | GGYRCC | 1 cut(s) | 159 |
| BsmAI | GTCTC | 1 cut(s) | 771 |
| BsmI | GAATGC | 4 cut(s) | 10, 34, 547, 571 |
| Bsp143I | GATC | 2 cut(s) | 109, 611 |
| BspCNI | CTCAG | 2 cut(s) | 235, 241 |
| BspHI | TCATGA | 1 cut(s) | 444 |
| BspLI | GGNNCC | 1 cut(s) | 161 |
| BspPI | GGATC | 1 cut(s) | 104 |
| BspT107I | GGYRCC | 1 cut(s) | 159 |
| BspTI | CTTAAG | 1 cut(s) | 101 |
| BsrDI | GCAATG | 1 cut(s) | 543 |
| BssMI | GATC | 2 cut(s) | 109, 611 |
| BssNAI | GTATAC | 1 cut(s) | 239 |
| Bst1107I | GTATAC | 1 cut(s) | 239 |
| BstAFI | CTTAAG | 1 cut(s) | 101 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 542 |
| BstDEI | CTNAG | 2 cut(s) | 243, 249 |
| BstF5I | GGATG | 3 cut(s) | 61, 151, 640 |
| BstKTI | GATC | 2 cut(s) | 112, 614 |
| BstMAI | GTCTC | 1 cut(s) | 771 |
| BstMBI | GATC | 2 cut(s) | 109, 611 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 514, 542 |
| BstNSI | RCATGY | 3 cut(s) | 622, 704, 799 |
| BstV1I | GCAGC | 2 cut(s) | 54, 388 |
| BstV2I | GAAGAC | 1 cut(s) | 441 |
| BstX2I | RGATCY | 1 cut(s) | 109 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 722, 761 |
| BstYI | RGATCY | 1 cut(s) | 109 |
| BstZ17I | GTATAC | 1 cut(s) | 239 |
| BtsCI | GGATG | 3 cut(s) | 61, 151, 640 |
| BtsIMutI | CAGTG | 1 cut(s) | 636 |
| CaiI | CAGNNNCTG | 1 cut(s) | 224 |
| CciI | TCATGA | 1 cut(s) | 444 |
| Cfr13I | GGNCC | 2 cut(s) | 415, 665 |
| CseI | GACGC | 1 cut(s) | 514 |
| Csp6I | GTAC | 2 cut(s) | 160, 676 |
| CviJI | RGCY | 9 cut(s) | 20, 67, 119, 224, 308, 401, 529, 557, 726 |
| CviKI_1 | RGCY | 9 cut(s) | 20, 67, 119, 224, 308, 401, 529, 557, 726 |
| CviQI | GTAC | 2 cut(s) | 160, 676 |
| DdeI | CTNAG | 2 cut(s) | 243, 249 |
| DpnI | GATC | 2 cut(s) | 111, 613 |
| DpnII | GATC | 2 cut(s) | 109, 611 |
| DraI | TTTAAA | 3 cut(s) | 271, 522, 802 |
| Eco47I | GGWCC | 2 cut(s) | 415, 665 |
| EcoO109I | RGGNCCY | 1 cut(s) | 415 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 710, 742 |
| FblI | GTMKAC | 1 cut(s) | 238 |
| Fnu4HI | GCNGC | 2 cut(s) | 68, 402 |
| FokI | GGATG | 3 cut(s) | 68, 158, 647 |
| Fsp4HI | GCNGC | 2 cut(s) | 68, 402 |
| FspBI | CTAG | 2 cut(s) | 194, 258 |
| GluI | GCNGC | 2 cut(s) | 68, 402 |
| HgaI | GACGC | 1 cut(s) | 514 |
| HinfI | GANTC | 4 cut(s) | 245, 455, 733, 779 |
| Hpy166II | GTNNAC | 2 cut(s) | 239, 706 |
| Hpy188I | TCNGA | 4 cut(s) | 250, 301, 454, 603 |
| Hpy188III | TCNNGA | 5 cut(s) | 445, 459, 655, 715, 814 |
| Hpy8I | GTNNAC | 2 cut(s) | 239, 706 |
| HpyAV | CCTTC | 7 cut(s) | 35, 145, 379, 451, 572, 678, 680 |
| HpyCH4V | TGCA | 6 cut(s) | 32, 70, 404, 569, 695, 786 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 514, 542 |
| HpyF3I | CTNAG | 2 cut(s) | 243, 249 |
| KpnI | GGTACC | 1 cut(s) | 163 |
| Kzo9I | GATC | 2 cut(s) | 109, 611 |
| LpnPI | CCDG | 5 cut(s) | 129, 151, 255, 555, 728 |
| Lsp1109I | GCAGC | 2 cut(s) | 54, 388 |
| LweI | GCATC | 1 cut(s) | 625 |
| MaeI | CTAG | 2 cut(s) | 194, 258 |
| MalI | GATC | 2 cut(s) | 111, 613 |
| MboI | GATC | 2 cut(s) | 109, 611 |
| MboII | GAAGA | 8 cut(s) | 37, 119, 217, 293, 446, 574, 621, 742 |
| MfeI | CAATTG | 1 cut(s) | 679 |
| MflI | RGATCY | 1 cut(s) | 109 |
| MluCI | AATT | 4 cut(s) | 198, 287, 312, 679 |
| MlyI | GAGTC | 3 cut(s) | 254, 449, 773 |
| MmeI | TCCRAC | 2 cut(s) | 340, 754 |
| MnlI | CCTC | 4 cut(s) | 224, 506, 597, 758 |
| MseI | TTAA | 5 cut(s) | 102, 270, 521, 801, 807 |
| MslI | CAYNNNNRTG | 3 cut(s) | 341, 443, 759 |
| MspA1I | CMGCKG | 1 cut(s) | 119 |
| MspCI | CTTAAG | 1 cut(s) | 101 |
| MssI | GTTTAAAC | 1 cut(s) | 802 |
| MunI | CAATTG | 1 cut(s) | 679 |
| Mva1269I | GAATGC | 4 cut(s) | 10, 34, 547, 571 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 514, 542 |
| NdeII | GATC | 2 cut(s) | 109, 611 |
| NlaIV | GGNNCC | 1 cut(s) | 161 |
| NspI | RCATGY | 3 cut(s) | 622, 704, 799 |
| PagI | TCATGA | 1 cut(s) | 444 |
| PciI | ACATGT | 2 cut(s) | 618, 795 |
| PctI | GAATGC | 4 cut(s) | 10, 34, 547, 571 |
| PfeI | GAWTC | 1 cut(s) | 733 |
| PflFI | GACNNNGTC | 1 cut(s) | 95 |
| PkrI | GCNGC | 2 cut(s) | 69, 403 |
| PleI | GAGTC | 3 cut(s) | 253, 449, 773 |
| PmeI | GTTTAAAC | 1 cut(s) | 802 |
| PpsI | GAGTC | 3 cut(s) | 253, 449, 773 |
| PpuMI | RGGWCCY | 1 cut(s) | 415 |
| PscI | ACATGT | 2 cut(s) | 618, 795 |
| Psp5II | RGGWCCY | 1 cut(s) | 415 |
| PspN4I | GGNNCC | 1 cut(s) | 161 |
| PspPI | GGNCC | 2 cut(s) | 415, 665 |
| PspPPI | RGGWCCY | 1 cut(s) | 415 |
| PstNI | CAGNNNCTG | 1 cut(s) | 224 |
| PsuI | RGATCY | 1 cut(s) | 109 |
| PsyI | GACNNNGTC | 1 cut(s) | 95 |
| PvuII | CAGCTG | 1 cut(s) | 119 |
| RsaI | GTAC | 2 cut(s) | 161, 677 |
| RsaNI | GTAC | 2 cut(s) | 160, 676 |
| RseI | CAYNNNNRTG | 3 cut(s) | 341, 443, 759 |
| SaqAI | TTAA | 5 cut(s) | 102, 270, 521, 801, 807 |
| SatI | GCNGC | 2 cut(s) | 68, 402 |
| Sau3AI | GATC | 2 cut(s) | 109, 611 |
| Sau96I | GGNCC | 2 cut(s) | 415, 665 |
| SchI | GAGTC | 3 cut(s) | 254, 449, 773 |
| SfaNI | GCATC | 1 cut(s) | 625 |
| SinI | GGWCC | 2 cut(s) | 415, 665 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 341, 443, 759 |
| SmlI | CTYRAG | 3 cut(s) | 101, 410, 457 |
| SmoI | CTYRAG | 3 cut(s) | 101, 410, 457 |
| Sse9I | AATT | 4 cut(s) | 198, 287, 312, 679 |
| SspMI | CTAG | 2 cut(s) | 194, 258 |
| TaqI | TCGA | 2 cut(s) | 500, 654 |
| TasI | AATT | 4 cut(s) | 198, 287, 312, 679 |
| TatI | WGTACW | 1 cut(s) | 675 |
| TfiI | GAWTC | 1 cut(s) | 733 |
| Tru1I | TTAA | 5 cut(s) | 102, 270, 521, 801, 807 |
| Tru9I | TTAA | 5 cut(s) | 102, 270, 521, 801, 807 |
| TscAI | CASTG | 1 cut(s) | 636 |
| TseI | GCWGC | 2 cut(s) | 67, 401 |
| TspDTI | ATGAA | 7 cut(s) | 17, 218, 341, 359, 398, 433, 554 |
| TspGWI | ACGGA | 1 cut(s) | 678 |
| TspRI | CASTG | 1 cut(s) | 636 |
| Tth111I | GACNNNGTC | 1 cut(s) | 95 |
| Vha464I | CTTAAG | 1 cut(s) | 101 |
| VpaK11BI | GGWCC | 2 cut(s) | 415, 665 |
| XapI | RAATTY | 1 cut(s) | 287 |
| XceI | RCATGY | 3 cut(s) | 622, 704, 799 |
| XmiI | GTMKAC | 1 cut(s) | 238 |
| XspI | CTAG | 2 cut(s) | 194, 258 |