Belongs to the small GTPase superfamily. Arf family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0214431 |
| rosa_laevigata | RLG00000002747 |
| rosa_samantha | Rh7AG280800 Rh7CG300300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 78 |
| AclWI | GGATC | 2 cut(s) | 114, 258 |
| AcsI | RAATTY | 1 cut(s) | 9 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 53 |
| AgsI | TTSAA | 1 cut(s) | 257 |
| AlwI | GGATC | 2 cut(s) | 114, 258 |
| ApoI | RAATTY | 1 cut(s) | 9 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 60, 92 |
| BceAI | ACGGC | 1 cut(s) | 138 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 46, 80 |
| BfaI | CTAG | 1 cut(s) | 14 |
| BfmI | CTRYAG | 1 cut(s) | 51 |
| BglII | AGATCT | 1 cut(s) | 291 |
| BmsI | GCATC | 1 cut(s) | 291 |
| BpuEI | CTTGAG | 1 cut(s) | 280 |
| BsaJI | CCNNGG | 1 cut(s) | 154 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 18, 48 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 53 |
| BseDI | CCNNGG | 1 cut(s) | 154 |
| BseGI | GGATG | 1 cut(s) | 306 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 53 |
| BseMII | CTCAG | 1 cut(s) | 124 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 53 |
| Bsp143I | GATC | 3 cut(s) | 106, 250, 291 |
| BspCNI | CTCAG | 1 cut(s) | 123 |
| BspPI | GGATC | 2 cut(s) | 114, 258 |
| BssECI | CCNNGG | 1 cut(s) | 154 |
| BssMI | GATC | 3 cut(s) | 106, 250, 291 |
| Bst4CI | ACNGT | 1 cut(s) | 52 |
| BstDEI | CTNAG | 1 cut(s) | 110 |
| BstDSI | CCRYGG | 1 cut(s) | 154 |
| BstF5I | GGATG | 1 cut(s) | 306 |
| BstKTI | GATC | 3 cut(s) | 109, 253, 294 |
| BstMBI | GATC | 3 cut(s) | 106, 250, 291 |
| BstSFI | CTRYAG | 1 cut(s) | 51 |
| BstX2I | RGATCY | 3 cut(s) | 106, 250, 291 |
| BstYI | RGATCY | 3 cut(s) | 106, 250, 291 |
| BtgI | CCRYGG | 1 cut(s) | 154 |
| BtsCI | GGATG | 1 cut(s) | 306 |
| BtsIMutI | CAGTG | 1 cut(s) | 118 |
| CviAII | CATG | 4 cut(s) | 138, 164, 245, 306 |
| DdeI | CTNAG | 1 cut(s) | 110 |
| DpnI | GATC | 3 cut(s) | 108, 252, 293 |
| DpnII | GATC | 3 cut(s) | 106, 250, 291 |
| EcoRI | GAATTC | 1 cut(s) | 9 |
| FaeI | CATG | 4 cut(s) | 141, 167, 248, 309 |
| FaiI | YATR | 9 cut(s) | 103, 139, 148, 165, 191, 203, 215, 246, 307 |
| FatI | CATG | 4 cut(s) | 137, 163, 244, 305 |
| FblI | GTMKAC | 1 cut(s) | 78 |
| FspBI | CTAG | 1 cut(s) | 14 |
| Hin1II | CATG | 4 cut(s) | 141, 167, 248, 309 |
| HincII | GTYRAC | 1 cut(s) | 79 |
| HindII | GTYRAC | 1 cut(s) | 79 |
| HinfI | GANTC | 1 cut(s) | 134 |
| Hpy166II | GTNNAC | 2 cut(s) | 79, 116 |
| Hpy8I | GTNNAC | 2 cut(s) | 79, 116 |
| HpyAV | CCTTC | 1 cut(s) | 211 |
| HpyCH4III | ACNGT | 1 cut(s) | 52 |
| HpyF3I | CTNAG | 1 cut(s) | 110 |
| Hsp92II | CATG | 4 cut(s) | 141, 167, 248, 309 |
| Kzo9I | GATC | 3 cut(s) | 106, 250, 291 |
| LweI | GCATC | 1 cut(s) | 291 |
| MaeI | CTAG | 1 cut(s) | 14 |
| MaeIII | GTNAC | 1 cut(s) | 34 |
| MalI | GATC | 3 cut(s) | 108, 252, 293 |
| MboI | GATC | 3 cut(s) | 106, 250, 291 |
| MboII | GAAGA | 1 cut(s) | 245 |
| MflI | RGATCY | 3 cut(s) | 106, 250, 291 |
| MluCI | AATT | 2 cut(s) | 9, 204 |
| MnlI | CCTC | 3 cut(s) | 22, 91, 241 |
| NdeII | GATC | 3 cut(s) | 106, 250, 291 |
| NlaIII | CATG | 4 cut(s) | 141, 167, 248, 309 |
| NmuCI | GTSAC | 1 cut(s) | 34 |
| PfeI | GAWTC | 1 cut(s) | 134 |
| PsuI | RGATCY | 3 cut(s) | 106, 250, 291 |
| SalI | GTCGAC | 1 cut(s) | 77 |
| Sau3AI | GATC | 3 cut(s) | 106, 250, 291 |
| SetI | ASST | 2 cut(s) | 33, 102 |
| SfaNI | GCATC | 1 cut(s) | 291 |
| SfcI | CTRYAG | 1 cut(s) | 51 |
| SmlI | CTYRAG | 1 cut(s) | 295 |
| SmoI | CTYRAG | 1 cut(s) | 295 |
| Sse9I | AATT | 2 cut(s) | 9, 204 |
| SspMI | CTAG | 1 cut(s) | 14 |
| TaaI | ACNGT | 1 cut(s) | 52 |
| TaqI | TCGA | 2 cut(s) | 66, 78 |
| TasI | AATT | 2 cut(s) | 9, 204 |
| TfiI | GAWTC | 1 cut(s) | 134 |
| TscAI | CASTG | 1 cut(s) | 118 |
| TseFI | GTSAC | 1 cut(s) | 34 |
| Tsp45I | GTSAC | 1 cut(s) | 34 |
| TspDTI | ATGAA | 4 cut(s) | 17, 126, 199, 230 |
| TspGWI | ACGGA | 1 cut(s) | 146 |
| TspRI | CASTG | 1 cut(s) | 118 |
| XapI | RAATTY | 1 cut(s) | 9 |
| XmiI | GTMKAC | 1 cut(s) | 78 |
| XspI | CTAG | 1 cut(s) | 14 |