RchiOBHm_Chr7g0222171

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
43351850 .. 43352248
399 bp
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UTR
Exon/CDS
Intron
PRQ19882

Sequence Viewer

Length: 168 bp
ATGCATTTCTTTGGAAATGGCTTGGCTTTGGGACTCGGAGAGAGGTGGGTCTTGTTCATTGAGGCGGTTGAGTTTGCGATTGTGTTTCTGGATTTCTTTCTTGCAGAGAGTGTAGACGATTTTGGGAGTTGGGTGCACACCTTTGTTGGTGATCGAGGTTGTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

55

Amino Acids

6.19

Weight (kDa)

4.28

Isoelectric Point (pI)

19.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030520)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0222171
rosa_multiflora Rmu_sc0007406.1_g000016

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 114
AciI CCGC 1 cut(s) 65
Alw21I GWGCWC 1 cut(s) 138
Alw44I GTGCAC 1 cut(s) 134
ApaLI GTGCAC 1 cut(s) 134
AsuHPI GGTGA 1 cut(s) 161
BaeGI GKGCMC 1 cut(s) 138
Bbv12I GWGCWC 1 cut(s) 138
BseSI GKGCMC 1 cut(s) 138
BsiHKAI GWGCWC 1 cut(s) 138
BslFI GGGAC 1 cut(s) 45
BsmFI GGGAC 1 cut(s) 45
Bsp1286I GDGCHC 1 cut(s) 138
Bsp143I GATC 1 cut(s) 151
BspACI CCGC 1 cut(s) 65
BssMI GATC 1 cut(s) 151
BstKTI GATC 1 cut(s) 154
BstMBI GATC 1 cut(s) 151
BstSLI GKGCMC 1 cut(s) 138
CviJI RGCY 2 cut(s) 21, 26
CviKI_1 RGCY 2 cut(s) 21, 26
DpnI GATC 1 cut(s) 153
DpnII GATC 1 cut(s) 151
EcoT22I ATGCAT 1 cut(s) 6
FaqI GGGAC 1 cut(s) 45
FblI GTMKAC 1 cut(s) 114
HinfI GANTC 1 cut(s) 33
HphI GGTGA 1 cut(s) 161
Hpy166II GTNNAC 2 cut(s) 115, 136
Hpy188I TCNGA 1 cut(s) 38
Hpy188III TCNNGA 1 cut(s) 89
Hpy8I GTNNAC 2 cut(s) 115, 136
HpyCH4V TGCA 3 cut(s) 4, 104, 136
Kzo9I GATC 1 cut(s) 151
LpnPI CCDG 1 cut(s) 74
MalI GATC 1 cut(s) 153
MboI GATC 1 cut(s) 151
MhlI GDGCHC 1 cut(s) 138
MlyI GAGTC 1 cut(s) 27
MnlI CCTC 3 cut(s) 36, 55, 149
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 1 cut(s) 166
NdeII GATC 1 cut(s) 151
NsiI ATGCAT 1 cut(s) 6
PleI GAGTC 1 cut(s) 27
PpsI GAGTC 1 cut(s) 27
SaqAI TTAA 1 cut(s) 166
Sau3AI GATC 1 cut(s) 151
SchI GAGTC 1 cut(s) 27
SduI GDGCHC 1 cut(s) 138
SetI ASST 3 cut(s) 47, 143, 160
SgeI CNNG 5 cut(s) 34, 47, 64, 101, 113
SsiI CCGC 1 cut(s) 65
TaqI TCGA 1 cut(s) 154
Tru1I TTAA 1 cut(s) 166
Tru9I TTAA 1 cut(s) 166
TspDTI ATGAA 1 cut(s) 46
VneI GTGCAC 1 cut(s) 134
XmiI GTMKAC 1 cut(s) 114
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.