RchiOBHm_Chr7g0226811

f-box protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
50166254 .. 50167841
1588 bp
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UTR
Exon/CDS
Intron
PRQ20312

Sequence Viewer

Length: 183 bp
ATGAGCCATGGATCTTCTTGCCATGCGAATATTGACTTGACAACGGTTGTCCTAAAAGTTAACAATGGAGTAGTTTCCACAATGATACACGGACAGGGAAAGCTCTTGAGTTGTGGCTCAAAAAGTGAAGGAGGCAGAAATTACCGAGCAAGACTCGCTTCTGGTTCCACTTTCCTCTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

60

Amino Acids

6.3

Weight (kDa)

9.69

Isoelectric Point (pI)

40.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0025118)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 19
AluBI AGCT 1 cut(s) 103
AluI AGCT 1 cut(s) 103
AlwI GGATC 1 cut(s) 19
BfaI CTAG 1 cut(s) 181
BmiI GGNNCC 1 cut(s) 166
BplI GAGNNNNNCTC 2 cut(s) 138, 170
BpuEI CTTGAG 1 cut(s) 127
BsaJI CCNNGG 1 cut(s) 7
BseDI CCNNGG 1 cut(s) 7
Bsp143I GATC 1 cut(s) 11
Bsp19I CCATGG 1 cut(s) 7
BspLI GGNNCC 1 cut(s) 166
BspPI GGATC 1 cut(s) 19
BssECI CCNNGG 1 cut(s) 7
BssMI GATC 1 cut(s) 11
BssT1I CCWWGG 1 cut(s) 7
Bst4CI ACNGT 1 cut(s) 46
BstDSI CCRYGG 1 cut(s) 7
BstKTI GATC 1 cut(s) 14
BstMBI GATC 1 cut(s) 11
BstMWI GCNNNNNNNGC 1 cut(s) 155
BstX2I RGATCY 1 cut(s) 11
BstYI RGATCY 1 cut(s) 11
BtgI CCRYGG 1 cut(s) 7
CviAII CATG 2 cut(s) 8, 23
CviJI RGCY 3 cut(s) 6, 103, 117
CviKI_1 RGCY 3 cut(s) 6, 103, 117
DpnI GATC 1 cut(s) 13
DpnII GATC 1 cut(s) 11
Eco130I CCWWGG 1 cut(s) 7
EcoT14I CCWWGG 1 cut(s) 7
ErhI CCWWGG 1 cut(s) 7
FaeI CATG 2 cut(s) 11, 26
FaiI YATR 2 cut(s) 9, 24
FalI AAGNNNNNCTT 2 cut(s) 142, 174
FatI CATG 2 cut(s) 7, 22
FspBI CTAG 1 cut(s) 181
Hin1II CATG 2 cut(s) 11, 26
HincII GTYRAC 1 cut(s) 61
HindII GTYRAC 1 cut(s) 61
HinfI GANTC 1 cut(s) 153
HpaI GTTAAC 1 cut(s) 61
Hpy166II GTNNAC 1 cut(s) 61
Hpy188III TCNNGA 1 cut(s) 106
Hpy8I GTNNAC 1 cut(s) 61
HpyAV CCTTC 1 cut(s) 122
HpyCH4III ACNGT 1 cut(s) 46
HpyF10VI GCNNNNNNNGC 1 cut(s) 155
Hsp92II CATG 2 cut(s) 11, 26
KspAI GTTAAC 1 cut(s) 61
Kzo9I GATC 1 cut(s) 11
LpnPI CCDG 2 cut(s) 80, 147
MaeI CTAG 1 cut(s) 181
MalI GATC 1 cut(s) 13
MboI GATC 1 cut(s) 11
MboII GAAGA 2 cut(s) 6, 169
MflI RGATCY 1 cut(s) 11
MluCI AATT 1 cut(s) 139
MlyI GAGTC 1 cut(s) 147
MnlI CCTC 1 cut(s) 125
MseI TTAA 1 cut(s) 60
MwoI GCNNNNNNNGC 1 cut(s) 155
NcoI CCATGG 1 cut(s) 7
NdeII GATC 1 cut(s) 11
NlaIII CATG 2 cut(s) 11, 26
NlaIV GGNNCC 1 cut(s) 166
PleI GAGTC 1 cut(s) 147
PpsI GAGTC 1 cut(s) 147
PspN4I GGNNCC 1 cut(s) 166
PsuI RGATCY 1 cut(s) 11
SaqAI TTAA 1 cut(s) 60
Sau3AI GATC 1 cut(s) 11
SchI GAGTC 1 cut(s) 147
SetI ASST 1 cut(s) 105
SmlI CTYRAG 1 cut(s) 106
SmoI CTYRAG 1 cut(s) 106
Sse9I AATT 1 cut(s) 139
SspI AATATT 1 cut(s) 31
SspMI CTAG 1 cut(s) 181
StyI CCWWGG 1 cut(s) 7
TaaI ACNGT 1 cut(s) 46
TasI AATT 1 cut(s) 139
Tru1I TTAA 1 cut(s) 60
Tru9I TTAA 1 cut(s) 60
TspGWI ACGGA 1 cut(s) 105
XspI CTAG 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.