RchiOBHm_Chr7g0227821

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
51079583 .. 51080070
488 bp
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UTR
Exon/CDS
Intron
PRQ20406

Sequence Viewer

Length: 132 bp
ATGTTTGGAAAGGATCAAGGAACAGAAGCTAGGTTGGTTAGTTTGGTTCTGGCTATTGACTGGGTAAGCCGTGTTTGGTATATTCTTTTTGGTTTCACATCAAGTTTGTTACGTGTTATTTTTGCCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

43

Amino Acids

4.91

Weight (kDa)

8.34

Isoelectric Point (pI)

26.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030457)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0221901 RchiOBHm_Chr7g0227821

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 21
AflIII ACRYGT 1 cut(s) 112
AluBI AGCT 1 cut(s) 29
AluI AGCT 1 cut(s) 29
AlwI GGATC 1 cut(s) 21
BceAI ACGGC 1 cut(s) 54
BfaI CTAG 1 cut(s) 30
BmrI ACTGGG 1 cut(s) 70
BmuI ACTGGG 1 cut(s) 70
BsaAI YACGTR 1 cut(s) 113
Bse1I ACTGG 1 cut(s) 65
BseNI ACTGG 1 cut(s) 65
Bsp143I GATC 1 cut(s) 13
BspPI GGATC 1 cut(s) 21
BsrI ACTGG 1 cut(s) 65
BssMI GATC 1 cut(s) 13
BstBAI YACGTR 1 cut(s) 113
BstKTI GATC 1 cut(s) 16
BstMBI GATC 1 cut(s) 13
CviJI RGCY 3 cut(s) 29, 53, 69
CviKI_1 RGCY 3 cut(s) 29, 53, 69
DpnI GATC 1 cut(s) 15
DpnII GATC 1 cut(s) 13
FaiI YATR 1 cut(s) 81
FspBI CTAG 1 cut(s) 30
HpyCH4IV ACGT 1 cut(s) 112
HpySE526I ACGT 1 cut(s) 112
Kzo9I GATC 1 cut(s) 13
LpnPI CCDG 2 cut(s) 35, 46
MaeI CTAG 1 cut(s) 30
MaeII ACGT 1 cut(s) 112
MaeIII GTNAC 1 cut(s) 108
MalI GATC 1 cut(s) 15
MboI GATC 1 cut(s) 13
NdeII GATC 1 cut(s) 13
Ppu21I YACGTR 1 cut(s) 113
Sau3AI GATC 1 cut(s) 13
SetI ASST 3 cut(s) 31, 35, 115
SgeI CNNG 7 cut(s) 29, 42, 62, 73, 83, 114, 125
SspMI CTAG 1 cut(s) 30
TaiI ACGT 1 cut(s) 115
XspI CTAG 1 cut(s) 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.