RchiOBHm_Chr7g0228001

Fatty acid amide

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
51292712 .. 51298087
5376 bp
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UTR
Exon/CDS
Intron
PRQ20421

Sequence Viewer

Length: 360 bp
ATGTGGTGCGCAAAGAGTCGGAGAACTGTGAGTGCTTGCAAGCCCAAAGTATATTTTCCTCTTCTGAACTCAGCAAAACCTATATCGGATATCAAATTGGCAAAATATGGTGAGTGGTTTAATGATTGCAGTGATGAGATCAGAGAATGTTGTACCAATGCCCTACACAGGCTTCACAAGCAATATGGTTGGAAGATTGTAGAGGTGACCATACCAGAGATAGAGGTGATGGGGTTGGCACATTACTTGACAATTGGATCAGAGTGTAGCACTTCGCTTAGTTCTCATCTAGAAAAGTTGGATTTCAAAGAATTAGGGTGGGATGTAAGACTGTTCATGAAGGGCGCATATATCAACTAA

Protein Analysis

119

Amino Acids

13.7

Weight (kDa)

8.21

Isoelectric Point (pI)

36.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030506)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0228001
rosa_samantha Rh3DG074300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 10
AclWI GGATC 1 cut(s) 265
AfaI GTAC 1 cut(s) 154
AfiI CCNNNNNNNGG 1 cut(s) 168
AgsI TTSAA 1 cut(s) 307
AlwI GGATC 1 cut(s) 265
AspLEI GCGC 2 cut(s) 11, 347
AsuHPI GGTGA 3 cut(s) 122, 217, 238
BccI CCATC 1 cut(s) 223
BfaI CTAG 1 cut(s) 290
Bsc4I CCNNNNNNNGG 1 cut(s) 168
BseGI GGATG 1 cut(s) 328
BseLI CCNNNNNNNGG 1 cut(s) 168
BseMII CTCAG 1 cut(s) 84
BslI CCNNNNNNNGG 1 cut(s) 168
Bsp143I GATC 2 cut(s) 138, 257
BspCNI CTCAG 1 cut(s) 83
BspHI TCATGA 1 cut(s) 336
BspPI GGATC 1 cut(s) 265
BssMI GATC 2 cut(s) 138, 257
Bst4CI ACNGT 2 cut(s) 28, 333
Bst6I CTCTTC 1 cut(s) 66
BstC8I GCNNGC 2 cut(s) 37, 41
BstDEI CTNAG 2 cut(s) 70, 278
BstEII GGTNACC 1 cut(s) 205
BstF5I GGATG 1 cut(s) 328
BstHHI GCGC 2 cut(s) 11, 347
BstKTI GATC 2 cut(s) 141, 260
BstMBI GATC 2 cut(s) 138, 257
BstMWI GCNNNNNNNGC 1 cut(s) 178
BstPI GGTNACC 1 cut(s) 205
BtsCI GGATG 1 cut(s) 328
BtsI GCAGTG 1 cut(s) 136
BtsIMutI CAGTG 1 cut(s) 136
Cac8I GCNNGC 2 cut(s) 37, 41
CciI TCATGA 1 cut(s) 336
CfoI GCGC 2 cut(s) 11, 347
Csp6I GTAC 1 cut(s) 153
CviAII CATG 1 cut(s) 337
CviJI RGCY 2 cut(s) 43, 172
CviKI_1 RGCY 2 cut(s) 43, 172
CviQI GTAC 1 cut(s) 153
DdeI CTNAG 2 cut(s) 70, 278
DpnI GATC 2 cut(s) 140, 259
DpnII GATC 2 cut(s) 138, 257
Eam1104I CTCTTC 1 cut(s) 66
EarI CTCTTC 1 cut(s) 66
Eco32I GATATC 1 cut(s) 91
Eco91I GGTNACC 1 cut(s) 205
EcoO65I GGTNACC 1 cut(s) 205
EcoRV GATATC 1 cut(s) 91
FaeI CATG 1 cut(s) 340
FaiI YATR 8 cut(s) 52, 83, 108, 186, 212, 338, 349, 351
FatI CATG 1 cut(s) 336
FokI GGATG 1 cut(s) 335
FspBI CTAG 1 cut(s) 290
FspI TGCGCA 1 cut(s) 10
GlaI GCGC 2 cut(s) 10, 346
HhaI GCGC 2 cut(s) 11, 347
Hin1II CATG 1 cut(s) 340
Hin6I GCGC 2 cut(s) 9, 345
HinP1I GCGC 2 cut(s) 9, 345
HinfI GANTC 1 cut(s) 16
HphI GGTGA 3 cut(s) 122, 217, 238
Hpy188I TCNGA 5 cut(s) 21, 66, 88, 143, 262
Hpy188III TCNNGA 2 cut(s) 290, 337
HpyAV CCTTC 1 cut(s) 334
HpyCH4III ACNGT 2 cut(s) 28, 333
HpyCH4V TGCA 2 cut(s) 39, 129
HpyF10VI GCNNNNNNNGC 1 cut(s) 178
HpyF3I CTNAG 2 cut(s) 70, 278
Hsp92II CATG 1 cut(s) 340
HspAI GCGC 2 cut(s) 9, 345
Kzo9I GATC 2 cut(s) 138, 257
LpnPI CCDG 2 cut(s) 154, 228
MaeI CTAG 1 cut(s) 290
MaeIII GTNAC 1 cut(s) 205
MalI GATC 2 cut(s) 140, 259
MboI GATC 2 cut(s) 138, 257
MboII GAAGA 2 cut(s) 53, 205
MfeI CAATTG 1 cut(s) 252
MluCI AATT 3 cut(s) 95, 252, 311
MlyI GAGTC 1 cut(s) 25
MmeI TCCRAC 2 cut(s) 170, 279
MnlI CCTC 3 cut(s) 69, 196, 217
MseI TTAA 1 cut(s) 120
MunI CAATTG 1 cut(s) 252
MwoI GCNNNNNNNGC 1 cut(s) 178
NdeII GATC 2 cut(s) 138, 257
NlaIII CATG 1 cut(s) 340
NmuCI GTSAC 1 cut(s) 205
NsbI TGCGCA 1 cut(s) 10
PagI TCATGA 1 cut(s) 336
PleI GAGTC 1 cut(s) 24
PpsI GAGTC 1 cut(s) 24
PspEI GGTNACC 1 cut(s) 205
RsaI GTAC 1 cut(s) 154
RsaNI GTAC 1 cut(s) 153
SaqAI TTAA 1 cut(s) 120
Sau3AI GATC 2 cut(s) 138, 257
SchI GAGTC 1 cut(s) 25
SetI ASST 3 cut(s) 82, 207, 228
SgeI CNNG 8 cut(s) 48, 52, 181, 190, 227, 259, 302, 349
Sse9I AATT 3 cut(s) 95, 252, 311
SspMI CTAG 1 cut(s) 290
TaaI ACNGT 2 cut(s) 28, 333
TasI AATT 3 cut(s) 95, 252, 311
Tru1I TTAA 1 cut(s) 120
Tru9I TTAA 1 cut(s) 120
TscAI CASTG 1 cut(s) 136
TseFI GTSAC 1 cut(s) 205
Tsp45I GTSAC 1 cut(s) 205
TspDTI ATGAA 2 cut(s) 325, 353
TspRI CASTG 1 cut(s) 136
XbaI TCTAGA 1 cut(s) 289
XspI CTAG 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.