RchiOBHm_Chr7g0231751

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
55473011 .. 55474083
1073 bp
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UTR
Exon/CDS
Intron
PRQ20770

Sequence Viewer

Length: 168 bp
ATGGAAGAGAGGGGAAGAGTGGATGTGACCCAAACTGAGCTTATTCAAATTCAACCAGAGGACAAACGTAGGGGATGTTCAATGAGGGTTGCGGCTCAAATTCAGGAGAGGATCACAACTGAGAGGAAGAACAGCATGACACGGGCTTCATCAGCAAAGGAACAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

55

Amino Acids

6.38

Weight (kDa)

9.18

Isoelectric Point (pI)

47.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030466)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0231751
rosa_samantha Rh7BG397000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 92
AclWI GGATC 1 cut(s) 119
AcsI RAATTY 2 cut(s) 48, 99
AgsI TTSAA 3 cut(s) 47, 53, 81
AluBI AGCT 1 cut(s) 40
AluI AGCT 1 cut(s) 40
AlwI GGATC 1 cut(s) 119
ApoI RAATTY 2 cut(s) 48, 99
BisI GCNGC 1 cut(s) 93
BlsI GCNGC 1 cut(s) 94
BseGI GGATG 2 cut(s) 28, 80
BseMII CTCAG 2 cut(s) 27, 111
Bsp143I GATC 1 cut(s) 111
BspACI CCGC 1 cut(s) 92
BspCNI CTCAG 2 cut(s) 28, 112
BspPI GGATC 1 cut(s) 119
BssMI GATC 1 cut(s) 111
Bst4CI ACNGT 1 cut(s) 165
Bst6I CTCTTC 1 cut(s) 10
BstDEI CTNAG 2 cut(s) 36, 120
BstF5I GGATG 2 cut(s) 28, 80
BstKTI GATC 1 cut(s) 114
BstMBI GATC 1 cut(s) 111
BstMWI GCNNNNNNNGC 1 cut(s) 152
BtsCI GGATG 2 cut(s) 28, 80
CviAII CATG 1 cut(s) 136
CviJI RGCY 3 cut(s) 40, 95, 146
CviKI_1 RGCY 3 cut(s) 40, 95, 146
DdeI CTNAG 2 cut(s) 36, 120
DpnI GATC 1 cut(s) 113
DpnII GATC 1 cut(s) 111
Eam1104I CTCTTC 1 cut(s) 10
EarI CTCTTC 1 cut(s) 10
FaeI CATG 1 cut(s) 139
FaiI YATR 1 cut(s) 137
FatI CATG 1 cut(s) 135
Fnu4HI GCNGC 1 cut(s) 93
FokI GGATG 2 cut(s) 35, 87
Fsp4HI GCNGC 1 cut(s) 93
GluI GCNGC 1 cut(s) 93
Hin1II CATG 1 cut(s) 139
Hpy188III TCNNGA 1 cut(s) 104
HpyCH4III ACNGT 1 cut(s) 165
HpyCH4IV ACGT 1 cut(s) 67
HpyF10VI GCNNNNNNNGC 1 cut(s) 152
HpyF3I CTNAG 2 cut(s) 36, 120
HpySE526I ACGT 1 cut(s) 67
Hsp92II CATG 1 cut(s) 139
Kzo9I GATC 1 cut(s) 111
LpnPI CCDG 2 cut(s) 69, 89
MaeII ACGT 1 cut(s) 67
MaeIII GTNAC 1 cut(s) 25
MalI GATC 1 cut(s) 113
MboI GATC 1 cut(s) 111
MboII GAAGA 3 cut(s) 17, 27, 139
MluCI AATT 2 cut(s) 48, 99
MnlI CCTC 5 cut(s) 3, 52, 78, 102, 117
MwoI GCNNNNNNNGC 1 cut(s) 152
NdeII GATC 1 cut(s) 111
NlaIII CATG 1 cut(s) 139
NmuCI GTSAC 1 cut(s) 25
PkrI GCNGC 1 cut(s) 94
PsrI GAACNNNNNNTAC 2 cut(s) 61, 93
SatI GCNGC 1 cut(s) 93
Sau3AI GATC 1 cut(s) 111
SetI ASST 2 cut(s) 42, 70
SgeI CNNG 5 cut(s) 68, 116, 148, 153, 155
Sse9I AATT 2 cut(s) 48, 99
SsiI CCGC 1 cut(s) 92
TaaI ACNGT 1 cut(s) 165
TaiI ACGT 1 cut(s) 70
TasI AATT 2 cut(s) 48, 99
TauI GCSGC 1 cut(s) 95
TseFI GTSAC 1 cut(s) 25
Tsp45I GTSAC 1 cut(s) 25
TspDTI ATGAA 1 cut(s) 138
XapI RAATTY 2 cut(s) 48, 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.