RchiOBHm_Chr7g0233821

water dikinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
58328631 .. 58328928
298 bp
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UTR
Exon/CDS
Intron
PRQ20959

Sequence Viewer

Length: 177 bp
ATGTTCTTCATTTCCTTGGTGCTCGAAAATTTATGCCTGTCAACAGTTAACAATGAAGATCTCATTTACTGCACCAAGGTAGATCTCTCCGTGAGGATGAATGCAATCATGCTGACCTCTTCTCGTGTATCATTTGGGGAACTTCCAGTTTATGGTTTTGGACTGGTACCGTATTAG

Protein Analysis

58

Amino Acids

6.52

Weight (kDa)

4.51

Isoelectric Point (pI)

30.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030443)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0233821
rosa_samantha Rh7DG428700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 166
AccB1I GGYRCC 1 cut(s) 166
AccB7I CCANNNNNTGG 1 cut(s) 152
AcsI RAATTY 1 cut(s) 28
AfaI GTAC 1 cut(s) 168
AfiI CCNNNNNNNGG 1 cut(s) 152
Alw21I GWGCWC 1 cut(s) 24
ApoI RAATTY 1 cut(s) 28
Asp718I GGTACC 1 cut(s) 166
BanI GGYRCC 1 cut(s) 166
BauI CACGAG 1 cut(s) 123
Bbv12I GWGCWC 1 cut(s) 24
BglII AGATCT 2 cut(s) 58, 82
BmiI GGNNCC 1 cut(s) 168
BsaJI CCNNGG 2 cut(s) 15, 75
Bsc4I CCNNNNNNNGG 1 cut(s) 152
Bse1I ACTGG 2 cut(s) 146, 168
BseDI CCNNGG 2 cut(s) 15, 75
BseGI GGATG 1 cut(s) 102
BseLI CCNNNNNNNGG 1 cut(s) 152
BseNI ACTGG 2 cut(s) 146, 168
BsgI GTGCAG 1 cut(s) 55
BshNI GGYRCC 1 cut(s) 166
BsiHKAI GWGCWC 1 cut(s) 24
BslI CCNNNNNNNGG 1 cut(s) 152
BsmI GAATGC 1 cut(s) 106
Bsp1286I GDGCHC 1 cut(s) 24
Bsp143I GATC 2 cut(s) 58, 82
BspLI GGNNCC 1 cut(s) 168
BspT107I GGYRCC 1 cut(s) 166
BsrI ACTGG 2 cut(s) 146, 168
BssECI CCNNGG 2 cut(s) 15, 75
BssMI GATC 2 cut(s) 58, 82
BssSI CACGAG 1 cut(s) 123
BssT1I CCWWGG 2 cut(s) 15, 75
Bst2BI CACGAG 1 cut(s) 123
Bst4CI ACNGT 2 cut(s) 46, 171
Bst6I CTCTTC 1 cut(s) 124
BstF5I GGATG 1 cut(s) 102
BstKTI GATC 2 cut(s) 61, 85
BstMBI GATC 2 cut(s) 58, 82
BstX2I RGATCY 2 cut(s) 58, 82
BstYI RGATCY 2 cut(s) 58, 82
BtsCI GGATG 1 cut(s) 102
Csp6I GTAC 1 cut(s) 167
CviAII CATG 1 cut(s) 109
CviQI GTAC 1 cut(s) 167
DpnI GATC 2 cut(s) 60, 84
DpnII GATC 2 cut(s) 58, 82
Eam1104I CTCTTC 1 cut(s) 124
EarI CTCTTC 1 cut(s) 124
Eco130I CCWWGG 2 cut(s) 15, 75
EcoT14I CCWWGG 2 cut(s) 15, 75
ErhI CCWWGG 2 cut(s) 15, 75
FaeI CATG 1 cut(s) 112
FaiI YATR 3 cut(s) 34, 110, 153
FatI CATG 1 cut(s) 108
FokI GGATG 1 cut(s) 109
Hin1II CATG 1 cut(s) 112
HincII GTYRAC 2 cut(s) 42, 49
HindII GTYRAC 2 cut(s) 42, 49
HpaI GTTAAC 1 cut(s) 49
Hpy166II GTNNAC 2 cut(s) 42, 49
Hpy8I GTNNAC 2 cut(s) 42, 49
HpyCH4III ACNGT 2 cut(s) 46, 171
HpyCH4V TGCA 2 cut(s) 72, 104
Hsp92II CATG 1 cut(s) 112
KpnI GGTACC 1 cut(s) 170
KspAI GTTAAC 1 cut(s) 49
Kzo9I GATC 2 cut(s) 58, 82
LpnPI CCDG 3 cut(s) 50, 149, 159
MalI GATC 2 cut(s) 60, 84
MboI GATC 2 cut(s) 58, 82
MboII GAAGA 2 cut(s) 68, 111
MflI RGATCY 2 cut(s) 58, 82
MhlI GDGCHC 1 cut(s) 24
MluCI AATT 1 cut(s) 28
MnlI CCTC 2 cut(s) 87, 127
MseI TTAA 1 cut(s) 48
Mva1269I GAATGC 1 cut(s) 106
NdeII GATC 2 cut(s) 58, 82
NlaIII CATG 1 cut(s) 112
NlaIV GGNNCC 1 cut(s) 168
PctI GAATGC 1 cut(s) 106
PflMI CCANNNNNTGG 1 cut(s) 152
PspN4I GGNNCC 1 cut(s) 168
PsuI RGATCY 2 cut(s) 58, 82
RsaI GTAC 1 cut(s) 168
RsaNI GTAC 1 cut(s) 167
SaqAI TTAA 1 cut(s) 48
Sau3AI GATC 2 cut(s) 58, 82
SduI GDGCHC 1 cut(s) 24
SetI ASST 2 cut(s) 81, 119
SgeI CNNG 9 cut(s) 28, 35, 49, 88, 103, 121, 135, 137, 158
Sse9I AATT 1 cut(s) 28
StyI CCWWGG 2 cut(s) 15, 75
TaaI ACNGT 2 cut(s) 46, 171
TaqI TCGA 1 cut(s) 24
TasI AATT 1 cut(s) 28
Tru1I TTAA 1 cut(s) 48
Tru9I TTAA 1 cut(s) 48
TspDTI ATGAA 2 cut(s) 69, 113
TspGWI ACGGA 1 cut(s) 79
Van91I CCANNNNNTGG 1 cut(s) 152
XapI RAATTY 1 cut(s) 28
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.