RCHIOBHM_MTG0498501

Proton-conducting membrane transporter

Basic Information

Type: gene
Biological Identity
rosa_chinensis
Mt
Physical Location & Seq
Forward (+)
90711 .. 91148
438 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ15617

Sequence Viewer

Length: 180 bp
ATGTTACACGAAAGCGCCGCTTTCTCTGGAGTGTTGTCACACAGCAGCCCGCCTAGAAGAGCCACTCGCTCTGTAGTGTTGTCACACAAGATAAGCACGCCGCCCGCCTGCTGGCCGGGCGAATCGAAGTTATCTTCCGGTCAACTGTCCACCCAGTCAAGTGCAAAAAACACAGTATAA

Protein Analysis

59

Amino Acids

6.19

Weight (kDa)

10.3

Isoelectric Point (pI)

75.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0030548)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_MTg0498501
rosa_laevigata RLG00000011666

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 18, 50, 101, 105
AcoI YGGCCR 1 cut(s) 113
AfiI CCNNNNNNNGG 1 cut(s) 111
AoxI GGCC 1 cut(s) 113
ApeKI GCWGC 1 cut(s) 45
AspLEI GCGC 1 cut(s) 17
AsuC2I CCSGG 1 cut(s) 117
BbvI GCAGC 1 cut(s) 57
BcnI CCSGG 1 cut(s) 117
BfaI CTAG 1 cut(s) 54
BfmI CTRYAG 1 cut(s) 72
BfoI RGCGCY 1 cut(s) 18
BisI GCNGC 3 cut(s) 18, 46, 101
BlsI GCNGC 3 cut(s) 19, 47, 102
Bme1390I CCNGG 1 cut(s) 117
BmrFI CCNGG 1 cut(s) 117
BmrI ACTGGG 1 cut(s) 148
BmuI ACTGGG 1 cut(s) 148
BpmI CTGGAG 1 cut(s) 48
BpuMI CCSGG 1 cut(s) 117
BsaWI WCCGGW 1 cut(s) 137
Bsc4I CCNNNNNNNGG 1 cut(s) 111
Bse1I ACTGG 1 cut(s) 154
BseLI CCNNNNNNNGG 1 cut(s) 111
BseNI ACTGG 1 cut(s) 154
BseXI GCAGC 1 cut(s) 57
BshFI GGCC 1 cut(s) 115
BsiSI CCGG 2 cut(s) 116, 138
BslI CCNNNNNNNGG 1 cut(s) 111
BsnI GGCC 1 cut(s) 115
BspACI CCGC 4 cut(s) 18, 50, 101, 105
BspANI GGCC 1 cut(s) 115
BspQI GCTCTTC 1 cut(s) 52
BsrI ACTGG 1 cut(s) 154
Bst4CI ACNGT 2 cut(s) 147, 175
Bst6I CTCTTC 1 cut(s) 52
BstC8I GCNNGC 5 cut(s) 50, 98, 105, 109, 113
BstH2I RGCGCY 1 cut(s) 18
BstHHI GCGC 1 cut(s) 17
BstMWI GCNNNNNNNGC 1 cut(s) 117
BstSCI CCNGG 1 cut(s) 115
BstSFI CTRYAG 1 cut(s) 72
BstV1I GCAGC 1 cut(s) 57
BsuRI GGCC 1 cut(s) 115
Cac8I GCNNGC 5 cut(s) 50, 98, 105, 109, 113
CfoI GCGC 1 cut(s) 17
CviJI RGCY 3 cut(s) 48, 62, 115
CviKI_1 RGCY 3 cut(s) 48, 62, 115
EaeI YGGCCR 1 cut(s) 113
Eam1104I CTCTTC 1 cut(s) 52
EarI CTCTTC 1 cut(s) 52
FaiI YATR 1 cut(s) 178
FalI AAGNNNNNCTT 1 cut(s) 36
FauI CCCGC 2 cut(s) 57, 112
Fnu4HI GCNGC 3 cut(s) 18, 46, 101
Fsp4HI GCNGC 3 cut(s) 18, 46, 101
FspBI CTAG 1 cut(s) 54
GlaI GCGC 1 cut(s) 16
GluI GCNGC 3 cut(s) 18, 46, 101
GsuI CTGGAG 1 cut(s) 48
HaeII RGCGCY 1 cut(s) 18
HaeIII GGCC 1 cut(s) 115
HapII CCGG 2 cut(s) 116, 138
HhaI GCGC 1 cut(s) 17
Hin6I GCGC 1 cut(s) 15
HinP1I GCGC 1 cut(s) 15
HincII GTYRAC 1 cut(s) 143
HindII GTYRAC 1 cut(s) 143
HinfI GANTC 1 cut(s) 122
HpaII CCGG 2 cut(s) 116, 138
Hpy166II GTNNAC 2 cut(s) 143, 150
Hpy188III TCNNGA 1 cut(s) 27
Hpy8I GTNNAC 2 cut(s) 143, 150
HpyCH4III ACNGT 2 cut(s) 147, 175
HpyCH4V TGCA 1 cut(s) 164
HpyF10VI GCNNNNNNNGC 1 cut(s) 117
HspAI GCGC 1 cut(s) 15
LguI GCTCTTC 1 cut(s) 52
LpnPI CCDG 6 cut(s) 12, 97, 121, 129, 151, 167
Lsp1109I GCAGC 1 cut(s) 57
MaeI CTAG 1 cut(s) 54
MaeIII GTNAC 3 cut(s) 3, 36, 81
MboII GAAGA 2 cut(s) 69, 126
MspI CCGG 2 cut(s) 116, 138
MspR9I CCNGG 1 cut(s) 117
MwoI GCNNNNNNNGC 1 cut(s) 117
NciI CCSGG 1 cut(s) 117
NmuCI GTSAC 2 cut(s) 36, 81
PciSI GCTCTTC 1 cut(s) 52
PfeI GAWTC 1 cut(s) 122
PkrI GCNGC 3 cut(s) 19, 47, 102
SapI GCTCTTC 1 cut(s) 52
SatI GCNGC 3 cut(s) 18, 46, 101
ScrFI CCNGG 1 cut(s) 117
SfcI CTRYAG 1 cut(s) 72
SsiI CCGC 4 cut(s) 18, 50, 101, 105
SspMI CTAG 1 cut(s) 54
StyD4I CCNGG 1 cut(s) 115
TaaI ACNGT 2 cut(s) 147, 175
TaqI TCGA 1 cut(s) 125
TauI GCSGC 2 cut(s) 20, 103
TfiI GAWTC 1 cut(s) 122
TseFI GTSAC 2 cut(s) 36, 81
TseI GCWGC 1 cut(s) 45
Tsp45I GTSAC 2 cut(s) 36, 81
XspI CTAG 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.