RCHIOBHM_MTG0498611

acid phosphatase activity

Basic Information

Type: gene
Biological Identity
rosa_chinensis
Mt
Physical Location & Seq
Forward (+)
133935 .. 134575
641 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ15626

Sequence Viewer

Length: 432 bp
ATGAAAAATTGCCTTGATGAATTTTGTAAAGCCTCTGGTCAACAGGTAAACTTTGATAAGTCTAGCCTTTATTGTTCTCCAAATACGGATGATGGTCTTGCTATTGAAATCCGCAATATATGTGGCTCTCCCTTGACTTCTCATTCCTTAGAGTTCCTCTGGTACAATCCAGAGTCACCAAAGCGGGCAGTTGTGGACAAAGTTCAAGCCACTTGGAAAAGTAAGCTCTTATCTATGGCAGGTGGATTGACCTTGATTCAAGCTGTGACATCTGCAGTACCTATTATCTACACCATGCAGACTGCTAAGCTTCCTGTGGGAACTTGTGAGGACATTAATAAATGTAATAGAAAGGGGGCACTCAATCTAAACCCCATTTGGTTAGATGGGACAAAGTTTGTAGACCTAAGCAGTTTGGGGTCCTGGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

143

Amino Acids

15.69

Weight (kDa)

6.55

Isoelectric Point (pI)

36.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030549)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_MTg0498611
rosa_multiflora Rmu_co8247213.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 230
Acc36I ACCTGC 1 cut(s) 230
AccI GTMKAC 1 cut(s) 402
AciI CCGC 2 cut(s) 112, 184
AcsI RAATTY 1 cut(s) 20
AfaI GTAC 2 cut(s) 164, 279
AgsI TTSAA 3 cut(s) 107, 206, 260
AjnI CCWGG 1 cut(s) 422
AluBI AGCT 3 cut(s) 226, 263, 310
AluI AGCT 3 cut(s) 226, 263, 310
ApoI RAATTY 1 cut(s) 20
AseI ATTAAT 1 cut(s) 336
AspS9I GGNCC 1 cut(s) 420
AsuHPI GGTGA 1 cut(s) 168
AvaII GGWCC 1 cut(s) 420
BaeGI GKGCMC 1 cut(s) 361
BccI CCATC 2 cut(s) 86, 380
BciT130I CCWGG 1 cut(s) 424
BfaI CTAG 1 cut(s) 63
BfmI CTRYAG 1 cut(s) 273
BfuAI ACCTGC 1 cut(s) 230
BlpI GCTNAGC 1 cut(s) 306
Bme1390I CCNGG 1 cut(s) 424
Bme18I GGWCC 1 cut(s) 420
BmgT120I GGNCC 1 cut(s) 420
BmiI GGNNCC 1 cut(s) 421
BmrFI CCNGG 1 cut(s) 424
Bpu10I CCTNAGC 1 cut(s) 407
Bpu1102I GCTNAGC 1 cut(s) 306
BsaJI CCNNGG 1 cut(s) 423
BseBI CCWGG 1 cut(s) 424
BseDI CCNNGG 1 cut(s) 423
BseGI GGATG 1 cut(s) 94
BseSI GKGCMC 1 cut(s) 361
BslFI GGGAC 1 cut(s) 403
BsmFI GGGAC 1 cut(s) 403
Bsp1286I GDGCHC 1 cut(s) 361
Bsp1720I GCTNAGC 1 cut(s) 306
BspACI CCGC 2 cut(s) 112, 184
BspLI GGNNCC 1 cut(s) 421
BspMAI CTGCAG 1 cut(s) 277
BspMI ACCTGC 1 cut(s) 230
BssECI CCNNGG 1 cut(s) 423
Bst2UI CCWGG 1 cut(s) 424
BstC8I GCNNGC 1 cut(s) 186
BstDEI CTNAG 3 cut(s) 148, 306, 407
BstF5I GGATG 1 cut(s) 94
BstNI CCWGG 1 cut(s) 424
BstSCI CCNGG 1 cut(s) 422
BstSFI CTRYAG 1 cut(s) 273
BstSLI GKGCMC 1 cut(s) 361
BtsCI GGATG 1 cut(s) 94
BveI ACCTGC 1 cut(s) 230
Cac8I GCNNGC 1 cut(s) 186
Cfr13I GGNCC 1 cut(s) 420
Csp6I GTAC 2 cut(s) 163, 278
CspCI CAANNNNNGTGG 2 cut(s) 103, 138
CviAII CATG 1 cut(s) 295
CviJI RGCY 7 cut(s) 32, 66, 126, 209, 226, 263, 310
CviKI_1 RGCY 7 cut(s) 32, 66, 126, 209, 226, 263, 310
CviQI GTAC 2 cut(s) 163, 278
DdeI CTNAG 3 cut(s) 148, 306, 407
Eco47I GGWCC 1 cut(s) 420
EcoO109I RGGNCCY 1 cut(s) 420
EcoRII CCWGG 1 cut(s) 422
FaeI CATG 1 cut(s) 298
FaiI YATR 4 cut(s) 119, 121, 236, 296
FaqI GGGAC 1 cut(s) 403
FatI CATG 1 cut(s) 294
FauI CCCGC 1 cut(s) 177
FblI GTMKAC 1 cut(s) 402
FokI GGATG 1 cut(s) 101
FspBI CTAG 1 cut(s) 63
Hin1II CATG 1 cut(s) 298
HincII GTYRAC 1 cut(s) 41
HindII GTYRAC 1 cut(s) 41
HindIII AAGCTT 1 cut(s) 308
HinfI GANTC 2 cut(s) 173, 256
HphI GGTGA 1 cut(s) 168
Hpy166II GTNNAC 4 cut(s) 41, 49, 196, 403
Hpy188III TCNNGA 1 cut(s) 170
Hpy8I GTNNAC 4 cut(s) 41, 49, 196, 403
HpyCH4V TGCA 2 cut(s) 275, 298
HpyF3I CTNAG 3 cut(s) 148, 306, 407
Hsp92II CATG 1 cut(s) 298
LpnPI CCDG 7 cut(s) 21, 29, 145, 183, 225, 327, 409
MaeI CTAG 1 cut(s) 63
MaeIII GTNAC 2 cut(s) 174, 265
MhlI GDGCHC 1 cut(s) 361
MluCI AATT 2 cut(s) 7, 20
MlyI GAGTC 1 cut(s) 182
MnlI CCTC 3 cut(s) 43, 167, 322
MseI TTAA 2 cut(s) 336, 430
MspR9I CCNGG 1 cut(s) 424
MvaI CCWGG 1 cut(s) 424
NlaIII CATG 1 cut(s) 298
NlaIV GGNNCC 1 cut(s) 421
NmuCI GTSAC 2 cut(s) 174, 265
PaqCI CACCTGC 1 cut(s) 230
PfeI GAWTC 1 cut(s) 256
PleI GAGTC 1 cut(s) 181
PpsI GAGTC 1 cut(s) 181
PpuMI RGGWCCY 1 cut(s) 420
PshBI ATTAAT 1 cut(s) 336
Psp5II RGGWCCY 1 cut(s) 420
Psp6I CCWGG 1 cut(s) 422
PspGI CCWGG 1 cut(s) 422
PspN4I GGNNCC 1 cut(s) 421
PspPI GGNCC 1 cut(s) 420
PspPPI RGGWCCY 1 cut(s) 420
PstI CTGCAG 1 cut(s) 277
RsaI GTAC 2 cut(s) 164, 279
RsaNI GTAC 2 cut(s) 163, 278
SaqAI TTAA 2 cut(s) 336, 430
Sau96I GGNCC 1 cut(s) 420
SchI GAGTC 1 cut(s) 182
ScrFI CCNGG 1 cut(s) 424
SduI GDGCHC 1 cut(s) 361
SetI ASST 8 cut(s) 48, 228, 244, 254, 265, 283, 312, 408
SfcI CTRYAG 1 cut(s) 273
SinI GGWCC 1 cut(s) 420
Sse9I AATT 2 cut(s) 7, 20
SsiI CCGC 2 cut(s) 112, 184
SspMI CTAG 1 cut(s) 63
StyD4I CCNGG 1 cut(s) 422
TasI AATT 2 cut(s) 7, 20
TfiI GAWTC 1 cut(s) 256
Tru1I TTAA 2 cut(s) 336, 430
Tru9I TTAA 2 cut(s) 336, 430
TseFI GTSAC 2 cut(s) 174, 265
Tsp45I GTSAC 2 cut(s) 174, 265
TspDTI ATGAA 2 cut(s) 17, 33
TspGWI ACGGA 1 cut(s) 101
VpaK11BI GGWCC 1 cut(s) 420
VspI ATTAAT 1 cut(s) 336
XapI RAATTY 1 cut(s) 20
XmiI GTMKAC 1 cut(s) 402
XspI CTAG 1 cut(s) 63
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.