Rmu_co8247213.1_g000001

acid phosphatase activity

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8247213.1
Physical Location & Seq
Reverse (-)
1 .. 643
643 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8247213.1_g000001.1.cds

Sequence Viewer

Length: 505 bp
atgaaaaattgccttgatgaattttgtaaagcctctggtcaacaggtaaactttgataagtctagcctttattgttctccaaatacggatgatggtcttgctattgaaatccgcaatatatgtggctctcccttgacttctcattccttagagttcctctggtacaatccagagtcaccaaagcgggcagttgtggacaaagttcaagccacttggaaaagtaagctcttatctatggcaggtggattgaccttgattcaagctgtgacatctgcagtacctattatctacaccatgcagactgctaagcttcctgtgggaacttgtgaggacattaataaatgtaatagaaagggggcactcaatctaaaccccatttggttagatgggacaaagaaaaaggactttttcgggacttgcagctttgatcctaatgctgagtttccttctgcttcttccagtacttggaaaagtattctctatggttctgaggtcttgcagcagg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

168

Amino Acids

18.47

Weight (kDa)

7.51

Isoelectric Point (pI)

40.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030549)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_MTg0498611
rosa_multiflora Rmu_co8247213.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 230
Acc36I ACCTGC 1 cut(s) 230
AccB7I CCANNNNNTGG 1 cut(s) 465
AciI CCGC 2 cut(s) 112, 184
AclWI GGATC 1 cut(s) 422
AcsI RAATTY 1 cut(s) 20
AfaI GTAC 3 cut(s) 164, 279, 463
AfiI CCNNNNNNNGG 1 cut(s) 465
AgsI TTSAA 3 cut(s) 107, 206, 260
AluBI AGCT 4 cut(s) 226, 263, 310, 423
AluI AGCT 4 cut(s) 226, 263, 310, 423
AlwI GGATC 1 cut(s) 422
ApeKI GCWGC 2 cut(s) 420, 499
ApoI RAATTY 1 cut(s) 20
AseI ATTAAT 1 cut(s) 336
AsuHPI GGTGA 1 cut(s) 168
BaeGI GKGCMC 1 cut(s) 361
BbvI GCAGC 1 cut(s) 432
BccI CCATC 2 cut(s) 86, 380
BfaI CTAG 1 cut(s) 63
BfmI CTRYAG 1 cut(s) 273
BfuAI ACCTGC 1 cut(s) 230
BisI GCNGC 2 cut(s) 421, 500
BlpI GCTNAGC 1 cut(s) 306
BlsI GCNGC 2 cut(s) 422, 501
BmcAI AGTACT 1 cut(s) 463
Bpu1102I GCTNAGC 1 cut(s) 306
Bsc4I CCNNNNNNNGG 1 cut(s) 465
Bse1I ACTGG 1 cut(s) 459
BseGI GGATG 1 cut(s) 94
BseLI CCNNNNNNNGG 1 cut(s) 465
BseMII CTCAG 2 cut(s) 429, 480
BseNI ACTGG 1 cut(s) 459
BseSI GKGCMC 1 cut(s) 361
BseXI GCAGC 1 cut(s) 432
BslFI GGGAC 2 cut(s) 403, 427
BslI CCNNNNNNNGG 1 cut(s) 465
BsmFI GGGAC 2 cut(s) 403, 427
Bsp1286I GDGCHC 1 cut(s) 361
Bsp143I GATC 1 cut(s) 427
Bsp1720I GCTNAGC 1 cut(s) 306
BspACI CCGC 2 cut(s) 112, 184
BspCNI CTCAG 2 cut(s) 430, 481
BspMAI CTGCAG 1 cut(s) 277
BspMI ACCTGC 1 cut(s) 230
BspPI GGATC 1 cut(s) 422
BsrI ACTGG 1 cut(s) 459
BssMI GATC 1 cut(s) 427
BstC8I GCNNGC 1 cut(s) 186
BstDEI CTNAG 4 cut(s) 148, 306, 438, 489
BstF5I GGATG 1 cut(s) 94
BstKTI GATC 1 cut(s) 430
BstMBI GATC 1 cut(s) 427
BstSFI CTRYAG 1 cut(s) 273
BstSLI GKGCMC 1 cut(s) 361
BstV1I GCAGC 1 cut(s) 432
BtsCI GGATG 1 cut(s) 94
BveI ACCTGC 1 cut(s) 230
Cac8I GCNNGC 1 cut(s) 186
Csp6I GTAC 3 cut(s) 163, 278, 462
CspCI CAANNNNNGTGG 2 cut(s) 103, 138
CviAII CATG 1 cut(s) 295
CviJI RGCY 8 cut(s) 32, 66, 126, 209, 226, 263, 310, 423
CviKI_1 RGCY 8 cut(s) 32, 66, 126, 209, 226, 263, 310, 423
CviQI GTAC 3 cut(s) 163, 278, 462
DdeI CTNAG 4 cut(s) 148, 306, 438, 489
DpnI GATC 1 cut(s) 429
DpnII GATC 1 cut(s) 427
FaeI CATG 1 cut(s) 298
FaiI YATR 5 cut(s) 119, 121, 236, 296, 483
FaqI GGGAC 2 cut(s) 403, 427
FatI CATG 1 cut(s) 294
FauI CCCGC 1 cut(s) 177
Fnu4HI GCNGC 2 cut(s) 421, 500
FokI GGATG 1 cut(s) 101
Fsp4HI GCNGC 2 cut(s) 421, 500
FspBI CTAG 1 cut(s) 63
GluI GCNGC 2 cut(s) 421, 500
Hin1II CATG 1 cut(s) 298
HincII GTYRAC 1 cut(s) 41
HindII GTYRAC 1 cut(s) 41
HindIII AAGCTT 1 cut(s) 308
HinfI GANTC 2 cut(s) 173, 256
HphI GGTGA 1 cut(s) 168
Hpy166II GTNNAC 3 cut(s) 41, 49, 196
Hpy188I TCNGA 1 cut(s) 490
Hpy188III TCNNGA 2 cut(s) 170, 412
Hpy8I GTNNAC 3 cut(s) 41, 49, 196
HpyAV CCTTC 1 cut(s) 456
HpyCH4V TGCA 4 cut(s) 275, 298, 420, 499
HpyF3I CTNAG 4 cut(s) 148, 306, 438, 489
Hsp92II CATG 1 cut(s) 298
Kzo9I GATC 1 cut(s) 427
LpnPI CCDG 8 cut(s) 21, 29, 145, 183, 225, 327, 472, 488
Lsp1109I GCAGC 1 cut(s) 432
MaeI CTAG 1 cut(s) 63
MaeIII GTNAC 2 cut(s) 174, 265
MalI GATC 1 cut(s) 429
MboI GATC 1 cut(s) 427
MboII GAAGA 1 cut(s) 447
MhlI GDGCHC 1 cut(s) 361
MluCI AATT 2 cut(s) 7, 20
MlyI GAGTC 1 cut(s) 182
MnlI CCTC 4 cut(s) 43, 167, 322, 484
MseI TTAA 1 cut(s) 336
NdeII GATC 1 cut(s) 427
NlaIII CATG 1 cut(s) 298
NmuCI GTSAC 2 cut(s) 174, 265
PaqCI CACCTGC 1 cut(s) 230
PfeI GAWTC 1 cut(s) 256
PflMI CCANNNNNTGG 1 cut(s) 465
PkrI GCNGC 2 cut(s) 422, 501
PleI GAGTC 1 cut(s) 181
PpsI GAGTC 1 cut(s) 181
PshBI ATTAAT 1 cut(s) 336
PstI CTGCAG 1 cut(s) 277
RsaI GTAC 3 cut(s) 164, 279, 463
RsaNI GTAC 3 cut(s) 163, 278, 462
SaqAI TTAA 1 cut(s) 336
SatI GCNGC 2 cut(s) 421, 500
Sau3AI GATC 1 cut(s) 427
ScaI AGTACT 1 cut(s) 463
SchI GAGTC 1 cut(s) 182
SduI GDGCHC 1 cut(s) 361
SetI ASST 9 cut(s) 48, 228, 244, 254, 265, 283, 312, 425, 495
SfcI CTRYAG 1 cut(s) 273
Sse9I AATT 2 cut(s) 7, 20
SsiI CCGC 2 cut(s) 112, 184
SspMI CTAG 1 cut(s) 63
TasI AATT 2 cut(s) 7, 20
TatI WGTACW 1 cut(s) 461
TfiI GAWTC 1 cut(s) 256
Tru1I TTAA 1 cut(s) 336
Tru9I TTAA 1 cut(s) 336
TseFI GTSAC 2 cut(s) 174, 265
TseI GCWGC 2 cut(s) 420, 499
Tsp45I GTSAC 2 cut(s) 174, 265
TspDTI ATGAA 2 cut(s) 17, 33
TspGWI ACGGA 1 cut(s) 101
Van91I CCANNNNNTGG 1 cut(s) 465
VspI ATTAAT 1 cut(s) 336
XapI RAATTY 1 cut(s) 20
XspI CTAG 1 cut(s) 63
ZrmI AGTACT 1 cut(s) 463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.