RLG00000006007
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0016341
Physical Location & Seq
Reverse (-)
3443841 .. 3446755
2915 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006007

Sequence Viewer

Length: 1371 bp
ATGAAACTAATGGCTTCCTCTCTATTCATCAAATGCTACCCTCTTCTTGCCATACTTCTGCTGATACACGAACCTGCTATAGCCCAAACTGGCTATAACAAAAAGGAGAAGGAGGCTCTTGATGCCTTGGAGGCTACTTTCAACAATGCCTATCTAAATGATAACTGGACAGACATTCCTTGCTTCTTGAGTGAGACATCAAAATGGTATGGAATTCAATGTGATCCCAATGGCCGCGTCACAAGCATTGTCTTGGAAAGTATGGGACTAGTAGGGAACGTCAAAGTTGATGCATTCAAAGACTTTACCGAGATGTCGGTGGTGAGCTTGAAGAACAACACTATTTGGGGAAACATGATGGATTTTAGTTCCAACCAGATGCTGACTCACATTGATATCTCCTGGAATATGCTGTTTGGGCCAATGTCAAGTTCAGTTTTGAGTCTTGGGAACTTGGAGTACTTGTTTGTTCAATACAATTGGTTGAGTGGTTTCATCCTGGAATTGAACCAATCCACACTGAAAGCAGTCGATCTCTCAAATAACAAGTTTAATGGACCAATTCCAACAACTCAAGCTCTTCAAACATTTGGCTACAATTCATATTCTGGTAACAATGGCTTGTGTGGATCACCTTCTCATGTTCCCTGTGACGCCGTCAACCCCCCTTCTCATTTGGATAATGAAAGCAATAATAGGTCTTCTGGTTCTATTACAAAACATCATACTTCTTTTCCCCCGTTTAATGCAATCTTTTATGGTTTGCTTATTGTTTGTCTAGTAATTGCAATTCTTCTTTGGGCACTTTATTACCTGAAATCTAGGAAGCTAAAGAAGTTGATAAAAGAAGTGAGAGCCACTAGTACTAAACAAATGAATGAGGAGAGCAAAGATGGTGGAAAGAAGGTTGAAGGAGAGGCGGTAAGATCAGTTGGAGGAATACAAGAGAAAGGGAAGCTCATATTCATTGGGGTTGGGGATGGAGCACCTGAGAAAGAGGCCCAAATCGAATTCCATTCACATGGACCTCAAGACTATCAGTTGCTTGAGCTCAACGAATGGTTTCGTATAAAGCACCCGAGTATGAAAGGACCAAAAGAGTTTCTAAAGAGTCTGATGTGTGGAGCTATGGCTTCTTTTAGAGCTCTTGACCGGAAAACTCTCGGTCTGCACTGCTCCACCAGGTGTCAGTGGTGTAGATCTCTGCAGTTGGGTTCACCGAGCAGTTATGAGGAACTATCTGGTGAGCACAGAACTACAAGTAGTGGAATGCTTAGATTGCTACAAATTGCAATGCAGTGCTGTGATCCATCCCCAGAGAAACGCCCCATGATGAGTGAAGTGAAGTGGCAAGGGAAGTGGAGAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 Pkinase Pkinase_Tyr

Protein Analysis

457

Amino Acids

51.03

Weight (kDa)

8.16

Isoelectric Point (pI)

33.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016341)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g15840
malus_domestica MD10G1049600.v1.1
prunus_persica Prupe.8G063300_v2.0.a1
pyrus_communis pycom10g03490
rosa_chinensis RchiOBHm_Chr7g0180261
rosa_laevigata RLG00000005279 RLG00000006007
rosa_multiflora Rmu_sc0002953.1_g000002 Rmu_sc0011963.1_g000015
rosa_rugosa Rorug06G0431900
rosa_samantha Rh7AG032200 Rh7BG032300 Rh7CG034100 Rh7DG032600
rosa_wichuraiana Rw7G002690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 82
AccII CGCG 1 cut(s) 237
AciI CCGC 2 cut(s) 235, 920
AclWI GGATC 3 cut(s) 218, 637, 1301
AcoI YGGCCR 1 cut(s) 232
AcsI RAATTY 2 cut(s) 213, 1010
AcyI GRCGYC 1 cut(s) 654
AdeI CACNNNGTG 1 cut(s) 1185
AfaI GTAC 2 cut(s) 461, 865
AgsI TTSAA 8 cut(s) 142, 218, 298, 331, 473, 508, 584, 911
AhlI ACTAGT 2 cut(s) 268, 860
AjnI CCWGG 3 cut(s) 401, 498, 1181
AjuI GAANNNNNNNTTGG 2 cut(s) 415, 447
AluBI AGCT 7 cut(s) 327, 578, 829, 958, 1051, 1127, 1145
AluI AGCT 7 cut(s) 327, 578, 829, 958, 1051, 1127, 1145
Alw21I GWGCWC 4 cut(s) 988, 1053, 1147, 1251
Alw26I GTCTC 1 cut(s) 188
AlwI GGATC 3 cut(s) 218, 637, 1301
AlwNI CAGNNNCTG 1 cut(s) 382
Ama87I CYCGRG 1 cut(s) 1078
AoxI GGCC 3 cut(s) 232, 419, 999
ApoI RAATTY 2 cut(s) 213, 1010
Asp700I GAANNNNTTC 1 cut(s) 1062
AspS9I GGNCC 5 cut(s) 419, 557, 1000, 1025, 1091
AsuHPI GGTGA 4 cut(s) 334, 624, 1209, 1256
AvaI CYCGRG 1 cut(s) 1078
AvaII GGWCC 3 cut(s) 557, 1025, 1091
BaeGI GKGCMC 1 cut(s) 805
BanII GRGCYC 2 cut(s) 1053, 1147
BbsI GAAGAC 1 cut(s) 693
Bbv12I GWGCWC 4 cut(s) 988, 1053, 1147, 1251
BccI CCATC 4 cut(s) 352, 887, 974, 1318
BceAI ACGGC 1 cut(s) 641
BciT130I CCWGG 3 cut(s) 403, 500, 1183
BcoDI GTCTC 1 cut(s) 188
BcuI ACTAGT 2 cut(s) 268, 860
BfaI CTAG 4 cut(s) 269, 779, 822, 861
BfmI CTRYAG 2 cut(s) 78, 1205
BfuAI ACCTGC 1 cut(s) 82
BglI GCCNNNNNGGC 1 cut(s) 131
BglII AGATCT 1 cut(s) 1199
BisI GCNGC 1 cut(s) 235
BlsI GCNGC 1 cut(s) 236
BmcAI AGTACT 2 cut(s) 461, 865
Bme1390I CCNGG 3 cut(s) 403, 500, 1183
Bme18I GGWCC 3 cut(s) 557, 1025, 1091
BmeT110I CYCGRG 1 cut(s) 1078
BmgT120I GGNCC 5 cut(s) 419, 557, 1000, 1025, 1091
BmrFI CCNGG 3 cut(s) 403, 500, 1183
BmsI GCATC 3 cut(s) 112, 280, 369
BpiI GAAGAC 1 cut(s) 693
BpuEI CTTGAG 4 cut(s) 208, 558, 1014, 1067
BsaHI GRCGYC 1 cut(s) 654
BsaJI CCNNGG 1 cut(s) 126
BsaWI WCCGGW 1 cut(s) 1152
BsaXI ACNNNNNCTCC 4 cut(s) 449, 479, 906, 936
Bse1I ACTGG 2 cut(s) 94, 170
Bse3DI GCAATG 1 cut(s) 1299
BseBI CCWGG 3 cut(s) 403, 500, 1183
BseDI CCNNGG 1 cut(s) 126
BseGI GGATG 3 cut(s) 495, 985, 1310
BseMI GCAATG 1 cut(s) 1299
BseMII CTCAG 1 cut(s) 981
BseNI ACTGG 2 cut(s) 94, 170
BseRI GAGGAG 1 cut(s) 896
BseSI GKGCMC 1 cut(s) 805
BsgI GTGCAG 1 cut(s) 1154
Bsh1236I CGCG 1 cut(s) 237
BshFI GGCC 3 cut(s) 234, 421, 1001
BsiHKAI GWGCWC 4 cut(s) 988, 1053, 1147, 1251
BsiHKCI CYCGRG 1 cut(s) 1078
BsiSI CCGG 1 cut(s) 1153
BslFI GGGAC 1 cut(s) 279
BsmAI GTCTC 1 cut(s) 188
BsmFI GGGAC 1 cut(s) 279
BsmI GAATGC 2 cut(s) 293, 1275
BsnI GGCC 3 cut(s) 234, 421, 1001
BsoBI CYCGRG 1 cut(s) 1078
Bsp1286I GDGCHC 5 cut(s) 805, 988, 1053, 1147, 1251
Bsp143I GATC 6 cut(s) 223, 532, 629, 926, 1199, 1306
BspACI CCGC 2 cut(s) 235, 920
BspANI GGCC 3 cut(s) 234, 421, 1001
BspCNI CTCAG 1 cut(s) 982
BspFNI CGCG 1 cut(s) 237
BspMAI CTGCAG 1 cut(s) 1209
BspMI ACCTGC 1 cut(s) 82
BspPI GGATC 3 cut(s) 218, 637, 1301
BspQI GCTCTTC 1 cut(s) 585
BsrDI GCAATG 1 cut(s) 1299
BsrI ACTGG 2 cut(s) 94, 170
BssECI CCNNGG 1 cut(s) 126
BssMI GATC 6 cut(s) 223, 532, 629, 926, 1199, 1306
BssNI GRCGYC 1 cut(s) 654
BssT1I CCWWGG 1 cut(s) 126
Bst2UI CCWGG 3 cut(s) 403, 500, 1183
Bst6I CTCTTC 2 cut(s) 48, 585
BstACI GRCGYC 1 cut(s) 654
BstDEI CTNAG 2 cut(s) 990, 1274
BstF5I GGATG 3 cut(s) 495, 985, 1310
BstFNI CGCG 1 cut(s) 237
BstKTI GATC 6 cut(s) 226, 535, 632, 929, 1202, 1309
BstMAI GTCTC 1 cut(s) 188
BstMBI GATC 6 cut(s) 223, 532, 629, 926, 1199, 1306
BstMWI GCNNNNNNNGC 5 cut(s) 122, 131, 243, 418, 1279
BstNI CCWGG 3 cut(s) 403, 500, 1183
BstSCI CCNGG 3 cut(s) 401, 498, 1181
BstSFI CTRYAG 2 cut(s) 78, 1205
BstSLI GKGCMC 1 cut(s) 805
BstUI CGCG 1 cut(s) 237
BstV2I GAAGAC 1 cut(s) 693
BstX2I RGATCY 1 cut(s) 1199
BstXI CCANNNNNNTGG 1 cut(s) 1022
BstYI RGATCY 1 cut(s) 1199
BsuRI GGCC 3 cut(s) 234, 421, 1001
BtsCI GGATG 3 cut(s) 495, 985, 1310
BtsI GCAGTG 2 cut(s) 1171, 1304
BtsIMutI CAGTG 4 cut(s) 518, 1171, 1196, 1304
BveI ACCTGC 1 cut(s) 82
CaiI CAGNNNCTG 1 cut(s) 382
Cfr13I GGNCC 5 cut(s) 419, 557, 1000, 1025, 1091
CseI GACGC 2 cut(s) 226, 662
CsiI ACCWGGT 1 cut(s) 1181
Csp6I GTAC 2 cut(s) 460, 864
CspCI CAANNNNNGTGG 3 cut(s) 877, 912, 1340
CviAII CATG 4 cut(s) 355, 641, 1022, 1330
CviQI GTAC 2 cut(s) 460, 864
DdeI CTNAG 2 cut(s) 990, 1274
DpnI GATC 6 cut(s) 225, 534, 631, 928, 1201, 1308
DpnII GATC 6 cut(s) 223, 532, 629, 926, 1199, 1306
DraIII CACNNNGTG 1 cut(s) 1185
EaeI YGGCCR 1 cut(s) 232
Eam1104I CTCTTC 2 cut(s) 48, 585
EarI CTCTTC 2 cut(s) 48, 585
Ecl136II GAGCTC 2 cut(s) 1051, 1145
Eco130I CCWWGG 1 cut(s) 126
Eco24I GRGCYC 2 cut(s) 1053, 1147
Eco32I GATATC 1 cut(s) 397
Eco47I GGWCC 3 cut(s) 557, 1025, 1091
Eco53kI GAGCTC 2 cut(s) 1051, 1145
Eco88I CYCGRG 1 cut(s) 1078
EcoICRI GAGCTC 2 cut(s) 1051, 1145
EcoRI GAATTC 2 cut(s) 213, 1010
EcoRII CCWGG 3 cut(s) 401, 498, 1181
EcoRV GATATC 1 cut(s) 397
EcoT14I CCWWGG 1 cut(s) 126
EcoT22I ATGCAT 1 cut(s) 295
EcoT38I GRGCYC 2 cut(s) 1053, 1147
ErhI CCWWGG 1 cut(s) 126
FaeI CATG 4 cut(s) 358, 644, 1025, 1333
FaqI GGGAC 1 cut(s) 279
FatI CATG 4 cut(s) 354, 640, 1021, 1329
Fnu4HI GCNGC 1 cut(s) 235
FokI GGATG 3 cut(s) 482, 992, 1297
FriOI GRGCYC 2 cut(s) 1053, 1147
Fsp4HI GCNGC 1 cut(s) 235
FspBI CTAG 4 cut(s) 269, 779, 822, 861
GluI GCNGC 1 cut(s) 235
HaeIII GGCC 3 cut(s) 234, 421, 1001
HapII CCGG 1 cut(s) 1153
HgaI GACGC 2 cut(s) 226, 662
Hin1I GRCGYC 1 cut(s) 654
Hin1II CATG 4 cut(s) 358, 644, 1025, 1333
HincII GTYRAC 1 cut(s) 661
HindII GTYRAC 1 cut(s) 661
HinfI GANTC 3 cut(s) 385, 442, 1111
HpaII CCGG 1 cut(s) 1153
HphI GGTGA 4 cut(s) 334, 624, 1209, 1256
Hpy166II GTNNAC 2 cut(s) 661, 1217
Hpy188I TCNGA 1 cut(s) 1116
Hpy188III TCNNGA 4 cut(s) 119, 187, 1031, 1148
Hpy8I GTNNAC 2 cut(s) 661, 1217
HpyAV CCTTC 5 cut(s) 103, 645, 678, 898, 905
HpyCH4IV ACGT 1 cut(s) 279
HpyCH4V TGCA 7 cut(s) 293, 749, 788, 1171, 1207, 1292, 1297
HpyF10VI GCNNNNNNNGC 5 cut(s) 122, 131, 243, 418, 1279
HpyF3I CTNAG 2 cut(s) 990, 1274
HpySE526I ACGT 1 cut(s) 279
Hsp92I GRCGYC 1 cut(s) 654
Hsp92II CATG 4 cut(s) 358, 644, 1025, 1333
Kzo9I GATC 6 cut(s) 223, 532, 629, 926, 1199, 1306
LguI GCTCTTC 1 cut(s) 585
LmnI GCTCC 3 cut(s) 983, 1124, 1181
LweI GCATC 3 cut(s) 112, 280, 369
MabI ACCWGGT 1 cut(s) 1181
MaeI CTAG 4 cut(s) 269, 779, 822, 861
MaeII ACGT 1 cut(s) 279
MaeIII GTNAC 3 cut(s) 238, 611, 650
MalI GATC 6 cut(s) 225, 534, 631, 928, 1201, 1308
MboI GATC 6 cut(s) 223, 532, 629, 926, 1199, 1306
MboII GAAGA 5 cut(s) 35, 343, 572, 693, 785
MfeI CAATTG 1 cut(s) 478
MflI RGATCY 1 cut(s) 1199
MhlI GDGCHC 5 cut(s) 805, 988, 1053, 1147, 1251
MluCI AATT 9 cut(s) 213, 478, 503, 561, 598, 783, 789, 1010, 1287
MlyI GAGTC 3 cut(s) 379, 451, 1120
MmeI TCCRAC 3 cut(s) 396, 590, 913
Mph1103I ATGCAT 1 cut(s) 295
MroXI GAANNNNTTC 1 cut(s) 1062
MseI TTAA 2 cut(s) 552, 744
MslI CAYNNNNRTG 2 cut(s) 202, 1020
MspI CCGG 1 cut(s) 1153
MspR9I CCNGG 3 cut(s) 403, 500, 1183
MunI CAATTG 1 cut(s) 478
Mva1269I GAATGC 2 cut(s) 293, 1275
MvaI CCWGG 3 cut(s) 403, 500, 1183
MvnI CGCG 1 cut(s) 237
MwoI GCNNNNNNNGC 5 cut(s) 122, 131, 243, 418, 1279
NdeII GATC 6 cut(s) 223, 532, 629, 926, 1199, 1306
NlaIII CATG 4 cut(s) 358, 644, 1025, 1333
NmuCI GTSAC 2 cut(s) 238, 650
NsiI ATGCAT 1 cut(s) 295
PciSI GCTCTTC 1 cut(s) 585
PctI GAATGC 2 cut(s) 293, 1275
PdmI GAANNNNTTC 1 cut(s) 1062
PflFI GACNNNGTC 1 cut(s) 656
PfoI TCCNGGA 2 cut(s) 401, 498
PkrI GCNGC 1 cut(s) 236
PleI GAGTC 3 cut(s) 379, 450, 1119
PpsI GAGTC 3 cut(s) 379, 450, 1119
Psp124BI GAGCTC 2 cut(s) 1053, 1147
Psp6I CCWGG 3 cut(s) 401, 498, 1181
PspGI CCWGG 3 cut(s) 401, 498, 1181
PspPI GGNCC 5 cut(s) 419, 557, 1000, 1025, 1091
PsrI GAACNNNNNNTAC 2 cut(s) 443, 475
PstI CTGCAG 1 cut(s) 1209
PstNI CAGNNNCTG 1 cut(s) 382
PsuI RGATCY 1 cut(s) 1199
PsyI GACNNNGTC 1 cut(s) 656
RsaI GTAC 2 cut(s) 461, 865
RsaNI GTAC 2 cut(s) 460, 864
RseI CAYNNNNRTG 2 cut(s) 202, 1020
SacI GAGCTC 2 cut(s) 1053, 1147
SapI GCTCTTC 1 cut(s) 585
SaqAI TTAA 2 cut(s) 552, 744
SatI GCNGC 1 cut(s) 235
Sau3AI GATC 6 cut(s) 223, 532, 629, 926, 1199, 1306
Sau96I GGNCC 5 cut(s) 419, 557, 1000, 1025, 1091
ScaI AGTACT 2 cut(s) 461, 865
SchI GAGTC 3 cut(s) 379, 451, 1120
ScrFI CCNGG 3 cut(s) 403, 500, 1183
SduI GDGCHC 5 cut(s) 805, 988, 1053, 1147, 1251
SexAI ACCWGGT 1 cut(s) 1181
SfaNI GCATC 3 cut(s) 112, 280, 369
SfcI CTRYAG 2 cut(s) 78, 1205
SinI GGWCC 3 cut(s) 557, 1025, 1091
SmiMI CAYNNNNRTG 2 cut(s) 202, 1020
SmlI CTYRAG 4 cut(s) 187, 573, 1029, 1046
SmoI CTYRAG 4 cut(s) 187, 573, 1029, 1046
SpeI ACTAGT 2 cut(s) 268, 860
Sse9I AATT 9 cut(s) 213, 478, 503, 561, 598, 783, 789, 1010, 1287
SsiI CCGC 2 cut(s) 235, 920
SspMI CTAG 4 cut(s) 269, 779, 822, 861
SstI GAGCTC 2 cut(s) 1053, 1147
StyD4I CCNGG 3 cut(s) 401, 498, 1181
StyI CCWWGG 1 cut(s) 126
TaiI ACGT 1 cut(s) 282
TaqI TCGA 2 cut(s) 531, 1008
TaqII GACCGA 1 cut(s) 1154
TasI AATT 9 cut(s) 213, 478, 503, 561, 598, 783, 789, 1010, 1287
TatI WGTACW 2 cut(s) 459, 863
TauI GCSGC 1 cut(s) 237
Tru1I TTAA 2 cut(s) 552, 744
Tru9I TTAA 2 cut(s) 552, 744
TscAI CASTG 4 cut(s) 525, 1178, 1196, 1304
TseFI GTSAC 2 cut(s) 238, 650
Tsp45I GTSAC 2 cut(s) 238, 650
TspDTI ATGAA 8 cut(s) 16, 17, 484, 591, 699, 890, 955, 1100
TspRI CASTG 4 cut(s) 525, 1178, 1196, 1304
Tth111I GACNNNGTC 1 cut(s) 656
VpaK11BI GGWCC 3 cut(s) 557, 1025, 1091
XapI RAATTY 2 cut(s) 213, 1010
XmnI GAANNNNTTC 1 cut(s) 1062
XspI CTAG 4 cut(s) 269, 779, 822, 861
ZrmI AGTACT 2 cut(s) 461, 865
Zsp2I ATGCAT 1 cut(s) 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.