Rorug06G0431900
NAC Family

inactive receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
56708251 .. 56713679
5429 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0431900.1

Sequence Viewer

Length: 1620 bp
ATGGGTATTCTGAGTTCTATACTGGGTTTTTGTGGTTTTGGAATTGGAACTTCAATTGGACTTGTGATCGGGTATTACATGTTCATCTACTTCCAGCCTACTGATGTTAAGCATCCTCTGATTCGTCCTATGGTTGAGCAAGATTCGGAAACGTTGCAACGGATGCTTTCGGAGATCCCCTTGTGGGTTAAAAACCCAGACTATGATCGTCTTGACTGGCTTAACAAATTTGTTGAGATTATGTGGCCTTATCTGGACAAGGCAATTTGCAAGACTGCAAAGACCATAGCAAAGCCCATTATTGCTGAGCAAATTCCAAAATATAAAATCGACTCTGTTGATTTTGAAGTACTTACATTGGGCACCCTACCACCAACTTTTCAAGGAATGAAAGTTTATGTCACTGGTGAGAAGGAATTAATTATGGAACTATCCTTGAAGTGGGCAGGAAATCCTAACATTACTGTTGCAGCTAAAGCATTTGGGTTGAAAGCCACAGTTCAGGTGGTTGACTTGCAAGTGTTTGCGTCCCCACGTATCACCCTGAAGCCTCTGGTTCCGACCTTTCCTTGTTTTTCAAAAATCTTTGTTTCTCTTATGGAGAAGCCACATGTTGACTTCGGACTAAAACTCCTTGGAGCAGATGCAATGGCTATTCCAGGCCTGTATAGGTTTGTGCAGGAGCTTATTAAGGATCAAGTGGCAAATATGTACCTATGGCCCAAATACCTAGAAGTAACTATCATGGATCCCAAACTTGCCATGAGGAAACCCGTTGGGATTCTCACTGTAAAGGTTCTGAAGGCCACAAAACTCAAAAAGAAAGATTTAATGGGAGGAGCAGATCCTTATGTAAAACTCAAGCTGACTGAGGACAAGCTTCCTTCAAAGAAAACAACAGTGAAACACAAAACTTTGAACCCTGAATGGAATGAGGAATTTCATTTGTCTGTTAGAGACCCTGAAACTCAAGCATTGGAATTTATGATTTATGATTGGGAAAAGGTTGGCCGACACGATAAGATGGGTATAAATGTTATTCCCTTGAGCGAACTTACTCCTGATGAGTCTAAAGTTATGACTCCTGACATACTGAAAAACATGGACCCAAATGATGCTCAAAATGAGAAGTCGCGTGGACAGCTTGTTCTGGAACTGCTCTATAAACCCTTCAAGGAGGATGAGATGCCTGAAGATAAGGAAGATTCAAATGAGGTACAGAAGGCTCCTGAAGGAACTCCTGCAAGTGGTGGTCTGCTTGTAGTACACATCCATGAAGCTGAAGATTTGGAAGGAAAGCACCACACTAATCCACATGTGCGATTACTATTCAAAGGGGAGGAGAGAAGAACCAAGCATTTCAAGAAAAATCGGGACCCAAGATTTAACGAGGAGTTTCAGTTTATGTTAGAAGAACCACCTAAAGCTCATGATAGGCTTCATGTTGAGGTAGTCAGCACCTCCTCGAGGATGGGCCTGCTGCATCCCAAGGAAAATCTTGGATATGTGGATATAAATCTAGCGGATGTTGTTAGCAATAGAAGAATCAATGAGAAGCACAATCTGATCGACTCGAAGAATGGACGGATTCAAATCGAGCTGCAGTGGCGAACATCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

539

Amino Acids

61.65

Weight (kDa)

6.97

Isoelectric Point (pI)

28.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SMP_LBD PF17047 67 - 247 2.2e-16 Synaptotagmin-like mitochondrial-lipid-binding domain
C2 PF00168 260 - 357 3e-26 C2 domain
C2 PF00168 418 - 521 7.4e-13 C2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1465
AccB1I GGYRCC 1 cut(s) 362
AccII CGCG 1 cut(s) 1135
AciI CCGC 1 cut(s) 1523
AclI AACGTT 1 cut(s) 152
AclWI GGATC 5 cut(s) 169, 702, 743, 756, 839
AcoI YGGCCR 1 cut(s) 1009
AcsI RAATTY 4 cut(s) 227, 312, 938, 980
AcuI CTGAAG 5 cut(s) 566, 821, 1212, 1251, 1302
AfaI GTAC 4 cut(s) 351, 713, 1218, 1266
AfiI CCNNNNNNNGG 4 cut(s) 184, 441, 1247, 1467
AflIII ACRYGT 3 cut(s) 78, 610, 1315
AjnI CCWGG 1 cut(s) 658
AloI GAACNNNNNNTCC 2 cut(s) 1131, 1163
AluBI AGCT 8 cut(s) 473, 685, 865, 880, 1144, 1280, 1427, 1600
AluI AGCT 8 cut(s) 473, 685, 865, 880, 1144, 1280, 1427, 1600
Alw26I GTCTC 1 cut(s) 951
AlwI GGATC 5 cut(s) 169, 702, 743, 756, 839
Ama87I CYCGRG 1 cut(s) 1465
AoxI GGCC 6 cut(s) 245, 661, 719, 804, 1009, 1474
ApeKI GCWGC 3 cut(s) 470, 1480, 1600
ApoI RAATTY 4 cut(s) 227, 312, 938, 980
AseI ATTAAT 1 cut(s) 419
AspS9I GGNCC 4 cut(s) 720, 1105, 1375, 1474
AsuHPI GGTGA 2 cut(s) 419, 532
AvaI CYCGRG 1 cut(s) 1465
AvaII GGWCC 2 cut(s) 1105, 1375
BaeGI GKGCMC 1 cut(s) 365
BamHI GGATCC 1 cut(s) 748
BanI GGYRCC 1 cut(s) 362
BbvI GCAGC 3 cut(s) 482, 1467, 1587
BccI CCATC 2 cut(s) 1018, 1465
BciT130I CCWGG 1 cut(s) 660
BcoDI GTCTC 1 cut(s) 951
BfaI CTAG 2 cut(s) 731, 1520
BfmI CTRYAG 1 cut(s) 1601
BisI GCNGC 3 cut(s) 471, 1481, 1601
BlpI GCTNAGC 1 cut(s) 306
BlsI GCNGC 3 cut(s) 472, 1482, 1602
BmcAI AGTACT 1 cut(s) 351
Bme1390I CCNGG 1 cut(s) 660
Bme18I GGWCC 2 cut(s) 1105, 1375
BmeT110I CYCGRG 1 cut(s) 1465
BmgT120I GGNCC 4 cut(s) 720, 1105, 1375, 1474
BmiI GGNNCC 7 cut(s) 364, 558, 750, 1107, 1227, 1376, 1377
BmrFI CCNGG 1 cut(s) 660
BmrI ACTGGG 1 cut(s) 32
BmsI GCATC 6 cut(s) 121, 153, 634, 1105, 1176, 1492
BmuI ACTGGG 1 cut(s) 32
Bpu1102I GCTNAGC 1 cut(s) 306
BpuEI CTTGAG 3 cut(s) 845, 954, 1066
BsaAI YACGTR 1 cut(s) 536
BsaBI GATNNNNATC 2 cut(s) 1515, 1592
BsaI GGTCTC 1 cut(s) 951
BsaJI CCNNGG 2 cut(s) 634, 1488
BsaXI ACNNNNNCTCC 4 cut(s) 615, 645, 1385, 1415
Bsc4I CCNNNNNNNGG 4 cut(s) 184, 441, 1247, 1467
Bse1I ACTGG 3 cut(s) 27, 221, 409
Bse3DI GCAATG 1 cut(s) 654
Bse8I GATNNNNATC 2 cut(s) 1515, 1592
BseBI CCWGG 1 cut(s) 660
BseDI CCNNGG 2 cut(s) 634, 1488
BseGI GGATG 8 cut(s) 112, 168, 1186, 1269, 1476, 1483, 1531, 1613
BseJI GATNNNNATC 2 cut(s) 1515, 1592
BseLI CCNNNNNNNGG 4 cut(s) 184, 441, 1247, 1467
BseMI GCAATG 1 cut(s) 654
BseMII CTCAG 2 cut(s) 297, 861
BseNI ACTGG 3 cut(s) 27, 221, 409
BseRI GAGGAG 4 cut(s) 852, 1355, 1406, 1453
BseSI GKGCMC 1 cut(s) 365
BseXI GCAGC 3 cut(s) 482, 1467, 1587
BsgI GTGCAG 1 cut(s) 698
Bsh1236I CGCG 1 cut(s) 1135
BshFI GGCC 6 cut(s) 247, 663, 721, 806, 1011, 1476
BshNI GGYRCC 1 cut(s) 362
BsiHKCI CYCGRG 1 cut(s) 1465
BslFI GGGAC 2 cut(s) 514, 1388
BslI CCNNNNNNNGG 4 cut(s) 184, 441, 1247, 1467
BsmAI GTCTC 1 cut(s) 951
BsmFI GGGAC 2 cut(s) 514, 1388
BsnI GGCC 6 cut(s) 247, 663, 721, 806, 1011, 1476
Bso31I GGTCTC 1 cut(s) 951
BsoBI CYCGRG 1 cut(s) 1465
Bsp1286I GDGCHC 1 cut(s) 365
Bsp143I GATC 7 cut(s) 66, 174, 205, 694, 748, 844, 1566
Bsp1720I GCTNAGC 1 cut(s) 306
BspACI CCGC 1 cut(s) 1523
BspANI GGCC 6 cut(s) 247, 663, 721, 806, 1011, 1476
BspCNI CTCAG 2 cut(s) 298, 862
BspFNI CGCG 1 cut(s) 1135
BspHI TCATGA 1 cut(s) 1429
BspLI GGNNCC 7 cut(s) 364, 558, 750, 1107, 1227, 1376, 1377
BspMAI CTGCAG 1 cut(s) 1605
BspPI GGATC 5 cut(s) 169, 702, 743, 756, 839
BspT107I GGYRCC 1 cut(s) 362
BspTNI GGTCTC 1 cut(s) 951
BsrDI GCAATG 1 cut(s) 654
BsrI ACTGG 3 cut(s) 27, 221, 409
BssECI CCNNGG 2 cut(s) 634, 1488
BssMI GATC 7 cut(s) 66, 174, 205, 694, 748, 844, 1566
BssT1I CCWWGG 2 cut(s) 634, 1488
Bst2UI CCWGG 1 cut(s) 660
Bst4CI ACNGT 4 cut(s) 466, 499, 790, 901
BstAPI GCANNNNNTGC 1 cut(s) 163
BstBAI YACGTR 1 cut(s) 536
BstC8I GCNNGC 1 cut(s) 1478
BstDEI CTNAG 3 cut(s) 11, 306, 870
BstENI CCTNNNNNAGG 1 cut(s) 1465
BstF5I GGATG 8 cut(s) 112, 168, 1186, 1269, 1476, 1483, 1531, 1613
BstFNI CGCG 1 cut(s) 1135
BstKTI GATC 7 cut(s) 69, 177, 208, 697, 751, 847, 1569
BstMAI GTCTC 1 cut(s) 951
BstMBI GATC 7 cut(s) 66, 174, 205, 694, 748, 844, 1566
BstMWI GCNNNNNNNGC 4 cut(s) 163, 476, 1141, 1606
BstNI CCWGG 1 cut(s) 660
BstNSI RCATGY 3 cut(s) 82, 614, 1319
BstSCI CCNGG 1 cut(s) 658
BstSFI CTRYAG 1 cut(s) 1601
BstSLI GKGCMC 1 cut(s) 365
BstUI CGCG 1 cut(s) 1135
BstV1I GCAGC 3 cut(s) 482, 1467, 1587
BstX2I RGATCY 3 cut(s) 174, 748, 844
BstYI RGATCY 3 cut(s) 174, 748, 844
BsuRI GGCC 6 cut(s) 247, 663, 721, 806, 1011, 1476
BtsCI GGATG 8 cut(s) 112, 168, 1186, 1269, 1476, 1483, 1531, 1613
BtsI GCAGTG 1 cut(s) 1610
BtsIMutI CAGTG 4 cut(s) 402, 786, 906, 1610
Cac8I GCNNGC 1 cut(s) 1478
CciI TCATGA 1 cut(s) 1429
Cfr13I GGNCC 4 cut(s) 720, 1105, 1375, 1474
CseI GACGC 1 cut(s) 516
Csp6I GTAC 4 cut(s) 350, 712, 1217, 1265
CviAII CATG 9 cut(s) 79, 611, 745, 763, 1102, 1274, 1316, 1430, 1442
CviQI GTAC 4 cut(s) 350, 712, 1217, 1265
DdeI CTNAG 3 cut(s) 11, 306, 870
DpnI GATC 7 cut(s) 68, 176, 207, 696, 750, 846, 1568
DpnII GATC 7 cut(s) 66, 174, 205, 694, 748, 844, 1566
EaeI YGGCCR 1 cut(s) 1009
Eco130I CCWWGG 2 cut(s) 634, 1488
Eco147I AGGCCT 1 cut(s) 663
Eco31I GGTCTC 1 cut(s) 951
Eco47I GGWCC 2 cut(s) 1105, 1375
Eco57I CTGAAG 5 cut(s) 566, 821, 1212, 1251, 1302
Eco88I CYCGRG 1 cut(s) 1465
EcoNI CCTNNNNNAGG 1 cut(s) 1465
EcoO109I RGGNCCY 1 cut(s) 1375
EcoRII CCWGG 1 cut(s) 658
EcoT14I CCWWGG 2 cut(s) 634, 1488
ErhI CCWWGG 2 cut(s) 634, 1488
FaeI CATG 9 cut(s) 82, 614, 748, 766, 1105, 1277, 1319, 1433, 1445
FaqI GGGAC 2 cut(s) 514, 1388
FatI CATG 9 cut(s) 78, 610, 744, 762, 1101, 1273, 1315, 1429, 1441
Fnu4HI GCNGC 3 cut(s) 471, 1481, 1601
FokI GGATG 8 cut(s) 99, 175, 1193, 1256, 1470, 1483, 1538, 1600
Fsp4HI GCNGC 3 cut(s) 471, 1481, 1601
FspBI CTAG 2 cut(s) 731, 1520
GluI GCNGC 3 cut(s) 471, 1481, 1601
HaeIII GGCC 6 cut(s) 247, 663, 721, 806, 1011, 1476
HgaI GACGC 1 cut(s) 516
Hin1II CATG 9 cut(s) 82, 614, 748, 766, 1105, 1277, 1319, 1433, 1445
HincII GTYRAC 2 cut(s) 511, 616
HindII GTYRAC 2 cut(s) 511, 616
HindIII AAGCTT 1 cut(s) 878
HphI GGTGA 2 cut(s) 419, 532
Hpy166II GTNNAC 4 cut(s) 511, 616, 1139, 1267
Hpy188I TCNGA 8 cut(s) 12, 120, 148, 172, 561, 623, 801, 1566
Hpy8I GTNNAC 4 cut(s) 511, 616, 1139, 1267
HpyAV CCTTC 7 cut(s) 406, 796, 894, 1180, 1216, 1226, 1286
HpyCH4III ACNGT 4 cut(s) 466, 499, 790, 901
HpyCH4IV ACGT 2 cut(s) 152, 535
HpyF10VI GCNNNNNNNGC 4 cut(s) 163, 476, 1141, 1606
HpyF3I CTNAG 3 cut(s) 11, 306, 870
HpySE526I ACGT 2 cut(s) 152, 535
Hsp92II CATG 9 cut(s) 82, 614, 748, 766, 1105, 1277, 1319, 1433, 1445
KflI GGGWCCC 1 cut(s) 1375
Kzo9I GATC 7 cut(s) 66, 174, 205, 694, 748, 844, 1566
LmnI GCTCC 4 cut(s) 638, 682, 839, 1231
Lsp1109I GCAGC 3 cut(s) 482, 1467, 1587
LweI GCATC 6 cut(s) 121, 153, 634, 1105, 1176, 1492
MaeI CTAG 2 cut(s) 731, 1520
MaeII ACGT 2 cut(s) 152, 535
MaeIII GTNAC 2 cut(s) 400, 736
MalI GATC 7 cut(s) 68, 176, 207, 696, 750, 846, 1568
MboI GATC 7 cut(s) 66, 174, 205, 694, 748, 844, 1566
MboII GAAGA 7 cut(s) 1205, 1214, 1295, 1359, 1424, 1554, 1588
MfeI CAATTG 1 cut(s) 54
MflI RGATCY 3 cut(s) 174, 748, 844
MhlI GDGCHC 1 cut(s) 365
MluCI AATT 9 cut(s) 42, 54, 227, 264, 312, 416, 420, 938, 980
MlyI GAGTC 4 cut(s) 326, 1075, 1076, 1565
MmeI TCCRAC 1 cut(s) 584
MseI TTAA 7 cut(s) 108, 189, 222, 419, 690, 830, 1386
MslI CAYNNNNRTG 1 cut(s) 1272
MspR9I CCNGG 1 cut(s) 660
MunI CAATTG 1 cut(s) 54
MvaI CCWGG 1 cut(s) 660
MvnI CGCG 1 cut(s) 1135
MwoI GCNNNNNNNGC 4 cut(s) 163, 476, 1141, 1606
NdeII GATC 7 cut(s) 66, 174, 205, 694, 748, 844, 1566
NlaIII CATG 9 cut(s) 82, 614, 748, 766, 1105, 1277, 1319, 1433, 1445
NlaIV GGNNCC 7 cut(s) 364, 558, 750, 1107, 1227, 1376, 1377
NmuCI GTSAC 1 cut(s) 400
NspI RCATGY 3 cut(s) 82, 614, 1319
PaeR7I CTCGAG 1 cut(s) 1465
PagI TCATGA 1 cut(s) 1429
PceI AGGCCT 1 cut(s) 663
PciI ACATGT 3 cut(s) 78, 610, 1315
PfeI GAWTC 6 cut(s) 121, 143, 781, 1205, 1545, 1588
PkrI GCNGC 3 cut(s) 472, 1482, 1602
PleI GAGTC 4 cut(s) 326, 1075, 1075, 1565
PpsI GAGTC 4 cut(s) 326, 1075, 1075, 1565
Ppu21I YACGTR 1 cut(s) 536
PpuMI RGGWCCY 1 cut(s) 1375
PscI ACATGT 3 cut(s) 78, 610, 1315
PshBI ATTAAT 1 cut(s) 419
Psp1406I AACGTT 1 cut(s) 152
Psp5II RGGWCCY 1 cut(s) 1375
Psp6I CCWGG 1 cut(s) 658
PspGI CCWGG 1 cut(s) 658
PspN4I GGNNCC 7 cut(s) 364, 558, 750, 1107, 1227, 1376, 1377
PspPI GGNCC 4 cut(s) 720, 1105, 1375, 1474
PspPPI RGGWCCY 1 cut(s) 1375
PspXI VCTCGAGB 1 cut(s) 1465
PsrI GAACNNNNNNTAC 3 cut(s) 30, 65, 97
PstI CTGCAG 1 cut(s) 1605
PsuI RGATCY 3 cut(s) 174, 748, 844
RsaI GTAC 4 cut(s) 351, 713, 1218, 1266
RsaNI GTAC 4 cut(s) 350, 712, 1217, 1265
RseI CAYNNNNRTG 1 cut(s) 1272
SaqAI TTAA 7 cut(s) 108, 189, 222, 419, 690, 830, 1386
SatI GCNGC 3 cut(s) 471, 1481, 1601
Sau3AI GATC 7 cut(s) 66, 174, 205, 694, 748, 844, 1566
Sau96I GGNCC 4 cut(s) 720, 1105, 1375, 1474
ScaI AGTACT 1 cut(s) 351
SchI GAGTC 4 cut(s) 326, 1075, 1076, 1565
ScrFI CCNGG 1 cut(s) 660
SduI GDGCHC 1 cut(s) 365
SfaNI GCATC 6 cut(s) 121, 153, 634, 1105, 1176, 1492
SfcI CTRYAG 1 cut(s) 1601
Sfr274I CTCGAG 1 cut(s) 1465
SinI GGWCC 2 cut(s) 1105, 1375
SlaI CTCGAG 1 cut(s) 1465
SmiMI CAYNNNNRTG 1 cut(s) 1272
SmlI CTYRAG 4 cut(s) 860, 969, 1045, 1465
SmoI CTYRAG 4 cut(s) 860, 969, 1045, 1465
Sse9I AATT 9 cut(s) 42, 54, 227, 264, 312, 416, 420, 938, 980
SseBI AGGCCT 1 cut(s) 663
SsiI CCGC 1 cut(s) 1523
SspMI CTAG 2 cut(s) 731, 1520
StuI AGGCCT 1 cut(s) 663
StyD4I CCNGG 1 cut(s) 658
StyI CCWWGG 2 cut(s) 634, 1488
TaaI ACNGT 4 cut(s) 466, 499, 790, 901
TaiI ACGT 2 cut(s) 155, 538
TaqI TCGA 5 cut(s) 330, 1466, 1569, 1574, 1596
TasI AATT 9 cut(s) 42, 54, 227, 264, 312, 416, 420, 938, 980
TatI WGTACW 2 cut(s) 349, 1264
TfiI GAWTC 6 cut(s) 121, 143, 781, 1205, 1545, 1588
Tru1I TTAA 7 cut(s) 108, 189, 222, 419, 690, 830, 1386
Tru9I TTAA 7 cut(s) 108, 189, 222, 419, 690, 830, 1386
TscAI CASTG 4 cut(s) 409, 793, 906, 1610
TseFI GTSAC 1 cut(s) 400
TseI GCWGC 3 cut(s) 470, 1480, 1600
Tsp45I GTSAC 1 cut(s) 400
TspDTI ATGAA 5 cut(s) 73, 404, 932, 1290, 1430
TspGWI ACGGA 2 cut(s) 175, 1600
TspRI CASTG 4 cut(s) 409, 793, 906, 1610
VpaK11BI GGWCC 2 cut(s) 1105, 1375
VspI ATTAAT 1 cut(s) 419
XagI CCTNNNNNAGG 1 cut(s) 1465
XapI RAATTY 4 cut(s) 227, 312, 938, 980
XceI RCATGY 3 cut(s) 82, 614, 1319
XcmI CCANNNNNNNNNTGG 1 cut(s) 502
XhoI CTCGAG 1 cut(s) 1465
XspI CTAG 2 cut(s) 731, 1520
ZrmI AGTACT 1 cut(s) 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.