MD14G1191200.v1.1

WW domain binding protein 11

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
28212537 .. 28216711
4175 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1191200.v1.1.491

Sequence Viewer

Length: 1626 bp
ATGAAGACGACGAAGGGAGGGAAGGTGATGAACCCTACGGACGCTTACCGGAAGGAGCTCCGGAAGAAGGAATTGAAACGGAATAAAAAAGAACGAAAGAAGGTGAGAGAGGTGGGGATCTTGAAGAAGGATCCCGATACTTTGAAAGAGCAGATTGATAAGCTGGAAATGATGAGTAAGTCACAGTTTGCTTATGGACTTCTGCCATATCATGCTGCTTTTCCTGAACACAAGAAGAGGCAACTAGAGGATACACTTAACCTTGTTATAAAGAAGCAGAAGGAATATGTAGAGAAGCAGAAAGAAAAGGGCGAGGTCCCAGTTATGTTCAGTCATTTGGGGCCGCCTAAAAGACGAAAGACTGCAGAAGAAGAGGAGAGAGCGAAGCATCCAATGCCTGAGGACTCAGTTTACTTCCATCCGACCCTGAATCCTACTGGGGCCCCACCACCTGGAAAGCCTCCAATGTTTAAATCGTCAATAGGACCAAGAATTCCCTTATCTGCTGCTTCGTCAAGTGGTGCTGCATCATCCTCGAAAATGGAGTCAGAGGATGCTGCACCTCTGGCTGAATCTGGTGACAATGGCCCTGGTGATGGCTCTGTCATACCTGAGTCCTTGCCGCTACCTCCTCCGCCTCCATTGCCACCTAACCCTGCAGCTACAAACCCAGGTATCTCATTGCCACCACCACCACCCCCACCTCCAGGACCCCTGCCTAAAGAGCAGATTTCTAGTCACCCCCTACTTCCCCCTCCTCCACCTTTTCAACAGTCCGCCCAGCCTCCTCCTCCTGGTATCAGCGGAAATGAGAAGGAACAAAATCAATCTTCATTGTCTGATTTAACCTCTAAGGACTCCACACAGGTGCATACCATGCTTCCTCCTCCTCCTCCTCCTCCACCTCCAGGATTACTGCCTAGGTCAACAAATAATCAGTCGGGAGGTGCAACATCTGACGCTGAAACCAATAATGCTCAACTTACCAAGGATTTTACTAACATGGTTCCACCACCTCCTCCTCCTCCTCCAAGACAACAACCTCCAGTTCCTGGATCCACCCTTATTCCAAATTTACATCCTGATGTATTGCCCCCAGGTATCTCACGTTTTCCTCCACCCCCACCTCCACCAGATATGCGGCCACCATTGTCCACTCCTGGACTTCCCACTCAACCAGGTCCCCCGGGAATGATGGTCCCAATGATCCCCAGGCCCCCATATGGTCCTCCCCCTGGACCTCCCCCAATGATGAGACCACCACTTCCACCTGGGCCACCTCCTACTTATCAAGAAGATGATTATGCTGCTCGAGTGGCTGCCCATCAGAAACCTTCATATGTTAAATCTGCAGCATCTACTGTTGTGAAGAGGCCTCTGGCTCAGCACACTCCAGAACTTATGTCCATGGTTCCTGCATCTGTTCGGGTAAGGAGAGAGATGGCCGCCCCAAAAGCAAAAGCAAAACCTTCACTCCCAACCACAGCAGCACCTACCCGGTCAGCAACTCCTCCTGTTAAACCAGAGTCAGCAAACTCGTCGTCAGCACCAAAAGGCAAGAGCATAGATGACTCGTATATGGCTTTCCTGGAGGACATGAAGGCGCTCGGAGCACTTGAAGGTTGA

Protein Analysis

542

Amino Acids

57.89

Weight (kDa)

9.54

Isoelectric Point (pI)

64.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Wbp11 PF09429 7 - 89 2.1e-19 WW domain binding protein 11
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 269
AccB7I CCANNNNNTGG 2 cut(s) 452, 1052
AccIII TCCGGA 1 cut(s) 60
AciI CCGC 7 cut(s) 344, 623, 635, 777, 804, 1141, 1446
AclWI GGATC 6 cut(s) 125, 125, 138, 1050, 1063, 1201
AcoI YGGCCR 2 cut(s) 1142, 1443
AcsI RAATTY 2 cut(s) 492, 1072
AfiI CCNNNNNNNGG 9 cut(s) 67, 452, 596, 707, 794, 908, 1052, 1223, 1235
AgsI TTSAA 5 cut(s) 76, 124, 145, 770, 1619
AleI CACNNNNGTG 1 cut(s) 866
AluBI AGCT 3 cut(s) 58, 163, 662
AluI AGCT 3 cut(s) 58, 163, 662
Alw21I GWGCWC 2 cut(s) 60, 1615
Alw26I GTCTC 1 cut(s) 1249
AlwI GGATC 6 cut(s) 125, 125, 138, 1050, 1063, 1201
AlwNI CAGNNNCTG 1 cut(s) 1052
Ama87I CYCGRG 2 cut(s) 1186, 1311
Aor13HI TCCGGA 1 cut(s) 60
AoxI GGCC 8 cut(s) 341, 441, 586, 1142, 1214, 1274, 1373, 1443
ApaI GGGCCC 1 cut(s) 445
ApeKI GCWGC 9 cut(s) 215, 506, 524, 557, 659, 1307, 1319, 1352, 1487
ApoI RAATTY 2 cut(s) 492, 1072
ArsI GACNNNNNNTTYG 6 cut(s) 530, 562, 923, 955, 1526, 1558
AspA2I CCTAGG 1 cut(s) 920
AspLEI GCGC 1 cut(s) 1606
AsuC2I CCSGG 3 cut(s) 1187, 1188, 1498
AsuHPI GGTGA 5 cut(s) 37, 115, 590, 605, 731
AvaI CYCGRG 2 cut(s) 1186, 1311
AvaII GGWCC 7 cut(s) 316, 485, 710, 1181, 1198, 1226, 1238
AvrII CCTAGG 1 cut(s) 920
AxyI CCTNAGG 1 cut(s) 399
BaeGI GKGCMC 1 cut(s) 445
BaeI ACNNNNGTAYC 2 cut(s) 658, 691
BamHI GGATCC 2 cut(s) 130, 1055
BanII GRGCYC 2 cut(s) 60, 445
BbsI GAAGAC 1 cut(s) 11
Bbv12I GWGCWC 2 cut(s) 60, 1615
BbvI GCAGC 9 cut(s) 202, 493, 511, 544, 671, 1294, 1306, 1364, 1499
BccI CCATC 5 cut(s) 426, 590, 1189, 1332, 1435
BcgI CGANNNNNNTGC 4 cut(s) 516, 550, 1521, 1555
BciVI GTATCC 1 cut(s) 244
BcnI CCSGG 3 cut(s) 1187, 1188, 1498
BcoDI GTCTC 1 cut(s) 1249
BfaI CTAG 3 cut(s) 245, 735, 921
BfmI CTRYAG 3 cut(s) 363, 657, 1350
BfoI RGCGCY 1 cut(s) 1607
BfuI GTATCC 1 cut(s) 244
BlnI CCTAGG 1 cut(s) 920
BlpI GCTNAGC 1 cut(s) 1383
Bme18I GGWCC 7 cut(s) 316, 485, 710, 1181, 1198, 1226, 1238
BmeT110I CYCGRG 2 cut(s) 1186, 1311
BmrI ACTGGG 2 cut(s) 314, 447
BmsI GCATC 5 cut(s) 397, 536, 544, 1364, 1427
BmuI ACTGGG 2 cut(s) 314, 447
BpiI GAAGAC 1 cut(s) 11
BpmI CTGGAG 5 cut(s) 690, 891, 1029, 1377, 1610
Bpu1102I GCTNAGC 1 cut(s) 1383
BpuMI CCSGG 3 cut(s) 1187, 1188, 1498
BsaI GGTCTC 1 cut(s) 1249
BsaWI WCCGGW 2 cut(s) 48, 60
BsaXI ACNNNNNCTCC 4 cut(s) 9, 39, 1458, 1488
Bsc4I CCNNNNNNNGG 9 cut(s) 67, 452, 596, 707, 794, 908, 1052, 1223, 1235
Bse1I ACTGG 3 cut(s) 320, 442, 1046
Bse21I CCTNAGG 1 cut(s) 399
Bse3DI GCAATG 2 cut(s) 641, 680
BseAI TCCGGA 1 cut(s) 60
BseGI GGATG 5 cut(s) 388, 418, 530, 559, 1078
BseLI CCNNNNNNNGG 9 cut(s) 67, 452, 596, 707, 794, 908, 1052, 1223, 1235
BseMI GCAATG 2 cut(s) 641, 680
BseMII CTCAG 4 cut(s) 390, 420, 603, 1397
BseNI ACTGG 3 cut(s) 320, 442, 1046
BseSI GKGCMC 1 cut(s) 445
BseXI GCAGC 9 cut(s) 202, 493, 511, 544, 671, 1294, 1306, 1364, 1499
BseYI CCCAGC 1 cut(s) 780
BsgI GTGCAG 1 cut(s) 543
BshFI GGCC 8 cut(s) 343, 443, 588, 1144, 1216, 1276, 1375, 1445
BsiHKAI GWGCWC 2 cut(s) 60, 1615
BsiHKCI CYCGRG 2 cut(s) 1186, 1311
BsiSI CCGG 4 cut(s) 49, 61, 1187, 1498
BslFI GGGAC 3 cut(s) 302, 1167, 1184
BslI CCNNNNNNNGG 9 cut(s) 67, 452, 596, 707, 794, 908, 1052, 1223, 1235
BsmAI GTCTC 1 cut(s) 1249
BsmFI GGGAC 3 cut(s) 302, 1167, 1184
BsnI GGCC 8 cut(s) 343, 443, 588, 1144, 1216, 1276, 1375, 1445
Bso31I GGTCTC 1 cut(s) 1249
BsoBI CYCGRG 2 cut(s) 1186, 1311
Bsp120I GGGCCC 1 cut(s) 441
Bsp1286I GDGCHC 3 cut(s) 60, 445, 1615
Bsp13I TCCGGA 1 cut(s) 60
Bsp143I GATC 4 cut(s) 117, 130, 1055, 1206
Bsp1720I GCTNAGC 1 cut(s) 1383
Bsp19I CCATGG 1 cut(s) 1407
BspACI CCGC 7 cut(s) 344, 623, 635, 777, 804, 1141, 1446
BspANI GGCC 8 cut(s) 343, 443, 588, 1144, 1216, 1276, 1375, 1445
BspCNI CTCAG 4 cut(s) 391, 419, 604, 1396
BspEI TCCGGA 1 cut(s) 60
BspMAI CTGCAG 3 cut(s) 367, 661, 1354
BspPI GGATC 6 cut(s) 125, 125, 138, 1050, 1063, 1201
BspTNI GGTCTC 1 cut(s) 1249
BsrDI GCAATG 2 cut(s) 641, 680
BsrI ACTGG 3 cut(s) 320, 442, 1046
BssMI GATC 4 cut(s) 117, 130, 1055, 1206
BssT1I CCWWGG 3 cut(s) 920, 987, 1407
Bst4CI ACNGT 3 cut(s) 186, 774, 1363
Bst6I CTCTTC 3 cut(s) 230, 366, 1364
BstAPI GCANNNNNTGC 2 cut(s) 394, 877
BstDEI CTNAG 5 cut(s) 399, 406, 612, 852, 1383
BstDSI CCRYGG 1 cut(s) 1407
BstF5I GGATG 5 cut(s) 388, 418, 530, 559, 1078
BstH2I RGCGCY 1 cut(s) 1607
BstHHI GCGC 1 cut(s) 1606
BstKTI GATC 4 cut(s) 120, 133, 1058, 1209
BstMAI GTCTC 1 cut(s) 1249
BstMBI GATC 4 cut(s) 117, 130, 1055, 1206
BstMWI GCNNNNNNNGC 8 cut(s) 394, 566, 643, 724, 877, 1316, 1454, 1610
BstSFI CTRYAG 3 cut(s) 363, 657, 1350
BstSLI GKGCMC 1 cut(s) 445
BstV1I GCAGC 9 cut(s) 202, 493, 511, 544, 671, 1294, 1306, 1364, 1499
BstV2I GAAGAC 1 cut(s) 11
BstX2I RGATCY 3 cut(s) 117, 130, 1055
BstYI RGATCY 3 cut(s) 117, 130, 1055
Bsu36I CCTNAGG 1 cut(s) 399
BsuI GTATCC 1 cut(s) 244
BsuRI GGCC 8 cut(s) 343, 443, 588, 1144, 1216, 1276, 1375, 1445
BtgI CCRYGG 1 cut(s) 1407
BtsCI GGATG 5 cut(s) 388, 418, 530, 559, 1078
CaiI CAGNNNCTG 1 cut(s) 1052
CfoI GCGC 1 cut(s) 1606
Cfr9I CCCGGG 1 cut(s) 1186
CseI GACGC 2 cut(s) 50, 968
CsiI ACCWGGT 1 cut(s) 1177
CviAII CATG 5 cut(s) 212, 877, 1003, 1408, 1597
DdeI CTNAG 5 cut(s) 399, 406, 612, 852, 1383
DpnI GATC 4 cut(s) 119, 132, 1057, 1208
DpnII GATC 4 cut(s) 117, 130, 1055, 1206
DraI TTTAAA 1 cut(s) 472
EaeI YGGCCR 2 cut(s) 1142, 1443
Eam1104I CTCTTC 3 cut(s) 230, 366, 1364
EarI CTCTTC 3 cut(s) 230, 366, 1364
EciI GGCGGA 2 cut(s) 624, 766
Ecl136II GAGCTC 1 cut(s) 58
Eco130I CCWWGG 3 cut(s) 920, 987, 1407
Eco147I AGGCCT 1 cut(s) 1375
Eco24I GRGCYC 2 cut(s) 60, 445
Eco31I GGTCTC 1 cut(s) 1249
Eco47I GGWCC 7 cut(s) 316, 485, 710, 1181, 1198, 1226, 1238
Eco53kI GAGCTC 1 cut(s) 58
Eco81I CCTNAGG 1 cut(s) 399
Eco88I CYCGRG 2 cut(s) 1186, 1311
EcoICRI GAGCTC 1 cut(s) 58
EcoO109I RGGNCCY 6 cut(s) 316, 441, 442, 710, 1181, 1215
EcoRI GAATTC 1 cut(s) 492
EcoT14I CCWWGG 3 cut(s) 920, 987, 1407
EcoT38I GRGCYC 2 cut(s) 60, 445
ErhI CCWWGG 3 cut(s) 920, 987, 1407
FaeI CATG 5 cut(s) 215, 880, 1006, 1411, 1600
FaqI GGGAC 3 cut(s) 302, 1167, 1184
FatI CATG 5 cut(s) 211, 876, 1002, 1407, 1596
FauNDI CATATG 2 cut(s) 1222, 1339
FokI GGATG 5 cut(s) 375, 405, 517, 566, 1065
FriOI GRGCYC 2 cut(s) 60, 445
FspBI CTAG 3 cut(s) 245, 735, 921
GlaI GCGC 1 cut(s) 1605
GsaI CCCAGC 1 cut(s) 784
GsuI CTGGAG 5 cut(s) 690, 891, 1029, 1377, 1610
HaeII RGCGCY 1 cut(s) 1607
HaeIII GGCC 8 cut(s) 343, 443, 588, 1144, 1216, 1276, 1375, 1445
HapII CCGG 4 cut(s) 49, 61, 1187, 1498
HgaI GACGC 2 cut(s) 50, 968
HhaI GCGC 1 cut(s) 1606
Hin1II CATG 5 cut(s) 215, 880, 1006, 1411, 1600
Hin6I GCGC 1 cut(s) 1604
HinP1I GCGC 1 cut(s) 1604
HincII GTYRAC 1 cut(s) 927
HindII GTYRAC 1 cut(s) 927
HinfI GANTC 8 cut(s) 404, 430, 545, 572, 614, 857, 1526, 1571
HpaII CCGG 4 cut(s) 49, 61, 1187, 1498
HphI GGTGA 5 cut(s) 37, 115, 590, 605, 731
Hpy166II GTNNAC 3 cut(s) 412, 927, 1155
Hpy188I TCNGA 6 cut(s) 423, 550, 841, 958, 1329, 1610
Hpy188III TCNNGA 8 cut(s) 61, 121, 134, 224, 942, 1082, 1292, 1394
Hpy8I GTNNAC 3 cut(s) 412, 927, 1155
Hpy99I CGWCG 2 cut(s) 13, 1543
HpyCH4III ACNGT 3 cut(s) 186, 774, 1363
HpyCH4IV ACGT 1 cut(s) 1108
HpyCH4V TGCA 8 cut(s) 365, 527, 560, 659, 871, 950, 1352, 1418
HpyF10VI GCNNNNNNNGC 8 cut(s) 394, 566, 643, 724, 877, 1316, 1454, 1610
HpyF3I CTNAG 5 cut(s) 399, 406, 612, 852, 1383
HpySE526I ACGT 1 cut(s) 1108
Hsp92II CATG 5 cut(s) 215, 880, 1006, 1411, 1600
HspAI GCGC 1 cut(s) 1604
Kpn2I TCCGGA 1 cut(s) 60
Kzo9I GATC 4 cut(s) 117, 130, 1055, 1206
LmnI GCTCC 3 cut(s) 55, 63, 1610
Lsp1109I GCAGC 9 cut(s) 202, 493, 511, 544, 671, 1294, 1306, 1364, 1499
LweI GCATC 5 cut(s) 397, 536, 544, 1364, 1427
MabI ACCWGGT 1 cut(s) 1177
MaeI CTAG 3 cut(s) 245, 735, 921
MaeII ACGT 1 cut(s) 1108
MaeIII GTNAC 3 cut(s) 180, 578, 737
MalI GATC 4 cut(s) 119, 132, 1057, 1208
MboI GATC 4 cut(s) 117, 130, 1055, 1206
MboII GAAGA 9 cut(s) 16, 76, 136, 247, 380, 383, 822, 1307, 1381
MflI RGATCY 3 cut(s) 117, 130, 1055
MhlI GDGCHC 3 cut(s) 60, 445, 1615
MluCI AATT 3 cut(s) 71, 492, 1072
MlyI GAGTC 6 cut(s) 398, 554, 623, 851, 1535, 1565
MmeI TCCRAC 1 cut(s) 446
MroI TCCGGA 1 cut(s) 60
MseI TTAA 5 cut(s) 258, 471, 845, 1344, 1518
MslI CAYNNNNRTG 2 cut(s) 866, 1083
MspA1I CMGCKG 1 cut(s) 804
MspI CCGG 4 cut(s) 49, 61, 1187, 1498
MwoI GCNNNNNNNGC 8 cut(s) 394, 566, 643, 724, 877, 1316, 1454, 1610
NciI CCSGG 3 cut(s) 1187, 1188, 1498
NcoI CCATGG 1 cut(s) 1407
NdeI CATATG 2 cut(s) 1222, 1339
NdeII GATC 4 cut(s) 117, 130, 1055, 1206
NlaIII CATG 5 cut(s) 215, 880, 1006, 1411, 1600
NmuCI GTSAC 3 cut(s) 180, 578, 737
OliI CACNNNNGTG 1 cut(s) 866
PaeR7I CTCGAG 1 cut(s) 1311
PceI AGGCCT 1 cut(s) 1375
PfeI GAWTC 2 cut(s) 430, 572
PflMI CCANNNNNTGG 2 cut(s) 452, 1052
PfoI TCCNGGA 5 cut(s) 706, 907, 1051, 1159, 1587
PleI GAGTC 6 cut(s) 398, 553, 622, 851, 1534, 1565
PpsI GAGTC 6 cut(s) 398, 553, 622, 851, 1534, 1565
PpuMI RGGWCCY 3 cut(s) 316, 710, 1181
PsiI TTATAA 1 cut(s) 269
Psp124BI GAGCTC 1 cut(s) 60
Psp5II RGGWCCY 3 cut(s) 316, 710, 1181
PspFI CCCAGC 1 cut(s) 780
PspOMI GGGCCC 1 cut(s) 441
PspPPI RGGWCCY 3 cut(s) 316, 710, 1181
PspXI VCTCGAGB 1 cut(s) 1311
PstI CTGCAG 3 cut(s) 367, 661, 1354
PstNI CAGNNNCTG 1 cut(s) 1052
PsuI RGATCY 3 cut(s) 117, 130, 1055
RseI CAYNNNNRTG 2 cut(s) 866, 1083
SacI GAGCTC 1 cut(s) 60
SaqAI TTAA 5 cut(s) 258, 471, 845, 1344, 1518
Sau3AI GATC 4 cut(s) 117, 130, 1055, 1206
SchI GAGTC 6 cut(s) 398, 554, 623, 851, 1535, 1565
SduI GDGCHC 3 cut(s) 60, 445, 1615
SexAI ACCWGGT 1 cut(s) 1177
SfaNI GCATC 5 cut(s) 397, 536, 544, 1364, 1427
SfcI CTRYAG 3 cut(s) 363, 657, 1350
Sfr274I CTCGAG 1 cut(s) 1311
SinI GGWCC 7 cut(s) 316, 485, 710, 1181, 1198, 1226, 1238
SlaI CTCGAG 1 cut(s) 1311
SmaI CCCGGG 1 cut(s) 1188
SmiMI CAYNNNNRTG 2 cut(s) 866, 1083
SmlI CTYRAG 1 cut(s) 1311
SmoI CTYRAG 1 cut(s) 1311
Sse9I AATT 3 cut(s) 71, 492, 1072
SseBI AGGCCT 1 cut(s) 1375
SsiI CCGC 7 cut(s) 344, 623, 635, 777, 804, 1141, 1446
SspMI CTAG 3 cut(s) 245, 735, 921
SstI GAGCTC 1 cut(s) 60
StuI AGGCCT 1 cut(s) 1375
StyI CCWWGG 3 cut(s) 920, 987, 1407
TaaI ACNGT 3 cut(s) 186, 774, 1363
TaiI ACGT 1 cut(s) 1111
TaqI TCGA 2 cut(s) 536, 1312
TasI AATT 3 cut(s) 71, 492, 1072
TauI GCSGC 4 cut(s) 346, 625, 1144, 1448
TfiI GAWTC 2 cut(s) 430, 572
Tru1I TTAA 5 cut(s) 258, 471, 845, 1344, 1518
Tru9I TTAA 5 cut(s) 258, 471, 845, 1344, 1518
TseFI GTSAC 3 cut(s) 180, 578, 737
TseI GCWGC 9 cut(s) 215, 506, 524, 557, 659, 1307, 1319, 1352, 1487
Tsp45I GTSAC 3 cut(s) 180, 578, 737
TspDTI ATGAA 5 cut(s) 17, 44, 822, 1326, 1613
TspGWI ACGGA 2 cut(s) 53, 94
TspMI CCCGGG 1 cut(s) 1186
Van91I CCANNNNNTGG 2 cut(s) 452, 1052
VpaK11BI GGWCC 7 cut(s) 316, 485, 710, 1181, 1198, 1226, 1238
XapI RAATTY 2 cut(s) 492, 1072
XhoI CTCGAG 1 cut(s) 1311
XmaI CCCGGG 1 cut(s) 1186
XmaJI CCTAGG 1 cut(s) 920
XspI CTAG 3 cut(s) 245, 735, 921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.