Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0007113

Physical Location & Seq

Genomic Coordinates Forward (+)

3508765 .. 3512455

Gene Structure 3691 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006011

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGCAGAGCCTCGAAATGGCGCCGGCTCGCCTGAAGACAACGAAGAAGCTCCGGTCGGAGCTACCTCGCCGGAGGCGAACTCAGATCTCTCCGATTCTCTACTCGTCGCAGAAACCGAATGCTCGCTGCAGTGAGGCCTCTGGTTTCTCTGTGAACTCGTACTTCGGCGGCGAAATTTCGTGCGAGTCGAGCAGAGTTTCCGTTGGATCGGAGAGTGAGGTGAGGTCGAGTTTGAAGAAGAGAAGTTTCGGCGAAACCGAAGCGCCGTCTCGGAAAGTTAATCGATCGAGTTATGGAGGAAAGGCGGTGAAGATACCGGCCGCCGGAGACGGTGAAGTTGAGGCTTCTGAGTCGTCGTGCGTGGAGTCTAATTCCGGAGCTGATTTTGGAGGCTTCGTTGAGAGAAAGTTGAAGCTGAAGACTAAGAGCGGAATTGCGAAGGTAATTGGAGGTTCTGAAGCAGTTACCGAATCAGCGATTTCCGAGTCCGATAAGGTCTCACTGAAATTCAAGGAGCAAGAGGTCATTTCACTCAACTCTGGCTTGCAATTGTGCTCGGAAGCGACAGTATCGGAGAGCAAGACGGCGAAAGACGGCGGTAACAGAGCACCGGAATTTGAATTCCACGGAGCGTCGCGCAACTACTGCGGTGAGAATTTCGCCGTTTCAAACTCGGAATCGACCATAGAGCAGAGGCCACAGAGCTTTGGATTGGACTCCGATTTCGCTTGTACCGAGCAGTTCTGTTATGACGACGGCTCCGAGTACTCTTCCAGTCAGACACTCTCGGATTTCCAATCGGATCCTTACCAGGAAAACTCGGAAATAGAATTCTCCGATTACACGCCGTCGTTTTTCACCGATTCTGGAAGCCAATTCTCTCAGGGTTCAGTCGGAGACTCACCGTCGCCTACTTTCGCCTTGCTTCTAAAATACAGAGAAGAGTTTTCGAGATCAGTCACTGCTTTAGATCTCAACGCAGCTCCACGCGTTAACGAAGCGTATAAGCATGAAGCCACATTTCTCAAGTTCGGAGACGATGAGGTGGAAGAGAGCTATCAGATGCTGAGGAATAGAGAGAGGCTGAAAGTGTTTTTGCGTGACTACACCGAGGACTACTCTTCCACGACGGAGTACGGCGGCCTGATTCTCCAGCAACGGTCGTACATGGTCCGGTGGATCATTGAGATATCTACTGCAACTGGACTACAGCAGGAGACCAAGTTTCTAGGTGTGAACCTCCTTGACCGATTTTTAAGCAAAGGATTTTTCAAGAGCAAAAGGATCCTTCAGATTGTTGGAATTGCCTGTCTAACATTGGCCACTAGGATAGAAGAAAATCAGCCCTACAACAGTGTGTGGGAAAAGAGTTTCTATGTAGGAAGCAATGTGTACAGCAGATGTGAAGTGGTGGCAATGGAATGGCTAGTGCTGGAGGTCCTCAACTTCCAGTGCTTTCTGCCCACCACCTATAACTTCTTATGGTTCTACCTGAAAGCTGCTGAAGCTGATGAAGAGGTGGAGACGAGGGCCAAGTACTTGGCAGGGCTGCAGCTTTCGGACCCTGTGCAGTTATGCTACTGGCCCTCAACAGTTGCAGCTGCACTCGTCATCCTGGCTTCTTTACAAGGAAATGATGCATCCCCCCAGCAAGTCCAAGACACTCATGTGAGAACAGGCGGTGATGATTTACATGAATGCATAGAGAGCCTAGAGTGGTTGTTGAGGCGTTTGATAGCACGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000724 GO:0000725 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0022607 GO:0033554 GO:0034641 GO:0035825 GO:0043170 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0045132 GO:0045143 GO:0046483 GO:0048285 GO:0050896 GO:0051026 GO:0051276 GO:0051321 GO:0051716 GO:0061982 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cyclin_C Cyclin_N

Protein Analysis

582

Amino Acids

64.8

Weight (kDa)

5.05

Isoelectric Point (pI)

62.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_N	PF00134	353 - 484	1.8e-20	Cyclin, N-terminal domain
Cyclin_C	PF02984	488 - 574	6.8e-12	Cyclin, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007113)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14750 AT1G14750 AT1G14750 AT1G14750
fragaria_vesca	FvH4_4g33270 FvH4_4g33270 FvH4_4g33270 FvH4_4g33270 FvH4_4g33270 FvH4_4g33270
malus_domestica	MD13G1018000.v1.1
prunus_persica	Prupe.1G335600_v2.0.a1
pyrus_communis	pycom13g01540
rosa_chinensis	RchiOBHm_Chr4g0442421
rosa_laevigata	RLG00000006011
rosa_multiflora	Rmu_co8190244.1_g000001 Rmu_sc0006478.1_g000001 Rmu_ssc0000204.1_g000061
rosa_roxburghii	Rroxscaffold_5G00383260
rosa_rugosa	Rorug04G0340900
rosa_samantha	Rh4AG392700 Rh4BG406300 Rh4CG421500 Rh4DG399500
rosa_wichuraiana	Rw4G033920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	19
AccBSI	CCGCTC	1 cut(s)	429
AccII	CGCG	2 cut(s)	637, 990
AccIII	TCCGGA	1 cut(s)	374
AciI	CCGC	8 cut(s)	168, 305, 321, 429, 597, 648, 1140, 1680
AclWI	GGATC	6 cut(s)	214, 797, 810, 1187, 1279, 1292
AcoI	YGGCCR	2 cut(s)	318, 1320
AcsI	RAATTY	6 cut(s)	174, 506, 614, 620, 655, 830
AcuI	CTGAAG	5 cut(s)	53, 437, 477, 1274, 1524
AcyI	GRCGYC	1 cut(s)	20
AfaI	GTAC	7 cut(s)	161, 733, 767, 1136, 1166, 1394, 1538
AfiI	CCNNNNNNNGG	2 cut(s)	16, 323
AflIII	ACRYGT	1 cut(s)	988
AgsI	TTSAA	6 cut(s)	235, 412, 511, 620, 669, 1273
AhdI	GACNNNNNGTC	1 cut(s)	904
AjnI	CCWGG	2 cut(s)	810, 1614
AleI	CACNNNNGTG	1 cut(s)	1667
Alw21I	GWGCWC	2 cut(s)	557, 610
Alw26I	GTCTC	7 cut(s)	273, 321, 502, 891, 1029, 1211, 1517
AlwI	GGATC	6 cut(s)	214, 797, 810, 1187, 1279, 1292
AlwNI	CAGNNNCTG	2 cut(s)	962, 1066
Aor13HI	TCCGGA	1 cut(s)	374
AoxI	GGCC	7 cut(s)	135, 318, 695, 1141, 1320, 1530, 1583
ApeKI	GCWGC	7 cut(s)	126, 980, 1499, 1549, 1552, 1598, 1601
ApoI	RAATTY	6 cut(s)	174, 506, 614, 620, 655, 830
ArsI	GACNNNNNNTTYG	2 cut(s)	707, 739
AspLEI	GCGC	3 cut(s)	22, 265, 639
AspS9I	GGNCC	5 cut(s)	1171, 1438, 1530, 1561, 1584
AsuHPI	GGTGA	7 cut(s)	232, 319, 344, 662, 850, 894, 1694
AvaII	GGWCC	3 cut(s)	1171, 1438, 1561
BalI	TGGCCA	1 cut(s)	1322
BamHI	GGATCC	2 cut(s)	802, 1284
BanI	GGYRCC	1 cut(s)	19
BbsI	GAAGAC	2 cut(s)	41, 425
Bbv12I	GWGCWC	2 cut(s)	557, 610
BbvCI	CCTCAGC	1 cut(s)	1067
BbvI	GCAGC	7 cut(s)	113, 992, 1486, 1536, 1564, 1588, 1610
BceAI	ACGGC	7 cut(s)	250, 600, 610, 647, 772, 832, 1153
BciT130I	CCWGG	2 cut(s)	812, 1616
BcoDI	GTCTC	7 cut(s)	273, 321, 502, 891, 1029, 1211, 1517
BfaI	CTAG	4 cut(s)	1229, 1326, 1427, 1712
BfmI	CTRYAG	3 cut(s)	127, 1208, 1550
BfoI	RGCGCY	2 cut(s)	23, 266
BglII	AGATCT	2 cut(s)	84, 970
BmcAI	AGTACT	2 cut(s)	767, 1538
Bme1390I	CCNGG	2 cut(s)	812, 1616
Bme18I	GGWCC	3 cut(s)	1171, 1438, 1561
BmeRI	GACNNNNNGTC	1 cut(s)	904
BmgT120I	GGNCC	5 cut(s)	1171, 1438, 1530, 1561, 1584
BmiI	GGNNCC	5 cut(s)	21, 760, 804, 1286, 1563
BmrFI	CCNGG	2 cut(s)	812, 1616
BmsI	GCATC	3 cut(s)	1053, 1627, 1649
BpiI	GAAGAC	2 cut(s)	41, 425
BplI	GAGNNNNNCTC	4 cut(s)	64, 96, 1103, 1135
BpmI	CTGGAG	2 cut(s)	1136, 1454
Bpu10I	CCTNAGC	1 cut(s)	1067
BpuEI	CTTGAG	1 cut(s)	1010
Bsa29I	ATCGAT	1 cut(s)	283
BsaHI	GRCGYC	1 cut(s)	20
BsaI	GGTCTC	2 cut(s)	502, 1211
BsaJI	CCNNGG	2 cut(s)	625, 1110
BsaWI	WCCGGW	4 cut(s)	51, 374, 610, 1173
BsaXI	ACNNNNNCTCC	6 cut(s)	381, 411, 743, 773, 1208, 1238
Bsc4I	CCNNNNNNNGG	2 cut(s)	16, 323
Bse118I	RCCGGY	2 cut(s)	22, 316
Bse1I	ACTGG	4 cut(s)	774, 1207, 1450, 1586
Bse3DI	GCAATG	2 cut(s)	1393, 1422
BseAI	TCCGGA	1 cut(s)	374
BseBI	CCWGG	2 cut(s)	812, 1616
BseCI	ATCGAT	1 cut(s)	283
BseDI	CCNNGG	2 cut(s)	625, 1110
BseGI	GGATG	2 cut(s)	1611, 1640
BseLI	CCNNNNNNNGG	2 cut(s)	16, 323
BseMI	GCAATG	2 cut(s)	1393, 1422
BseMII	CTCAG	4 cut(s)	95, 339, 896, 1058
BseNI	ACTGG	4 cut(s)	774, 1207, 1450, 1586
BseX3I	CGGCCG	1 cut(s)	318
BseXI	GCAGC	7 cut(s)	113, 992, 1486, 1536, 1564, 1588, 1610
BseYI	CCCAGC	1 cut(s)	1647
BsgI	GTGCAG	2 cut(s)	1587, 1589
Bsh1236I	CGCG	2 cut(s)	637, 990
Bsh1285I	CGRYCG	4 cut(s)	56, 287, 321, 1163
BshFI	GGCC	7 cut(s)	137, 320, 697, 1143, 1322, 1532, 1585
BshNI	GGYRCC	1 cut(s)	19
BshVI	ATCGAT	1 cut(s)	283
BsiEI	CGRYCG	4 cut(s)	56, 287, 321, 1163
BsiHKAI	GWGCWC	2 cut(s)	557, 610
BsiSI	CCGG	8 cut(s)	23, 52, 70, 317, 324, 375, 611, 1174
BslI	CCNNNNNNNGG	2 cut(s)	16, 323
BsmAI	GTCTC	7 cut(s)	273, 321, 502, 891, 1029, 1211, 1517
BsmBI	CGTCTC	4 cut(s)	273, 321, 1029, 1517
BsmI	GAATGC	2 cut(s)	124, 1703
BsnI	GGCC	7 cut(s)	137, 320, 697, 1143, 1322, 1532, 1585
Bso31I	GGTCTC	2 cut(s)	502, 1211
Bsp1286I	GDGCHC	2 cut(s)	557, 610
Bsp13I	TCCGGA	1 cut(s)	374
Bsp1407I	TGTACA	1 cut(s)	1392
Bsp143I	GATC	8 cut(s)	84, 206, 284, 802, 953, 970, 1179, 1284
BspACI	CCGC	8 cut(s)	168, 305, 321, 429, 597, 648, 1140, 1680
BspANI	GGCC	7 cut(s)	137, 320, 697, 1143, 1322, 1532, 1585
BspCNI	CTCAG	4 cut(s)	94, 340, 895, 1059
BspDI	ATCGAT	1 cut(s)	283
BspEI	TCCGGA	1 cut(s)	374
BspFNI	CGCG	2 cut(s)	637, 990
BspLI	GGNNCC	5 cut(s)	21, 760, 804, 1286, 1563
BspMAI	CTGCAG	2 cut(s)	131, 1554
BspPI	GGATC	6 cut(s)	214, 797, 810, 1187, 1279, 1292
BspT107I	GGYRCC	1 cut(s)	19
BspTNI	GGTCTC	2 cut(s)	502, 1211
BsrBI	CCGCTC	1 cut(s)	429
BsrDI	GCAATG	2 cut(s)	1393, 1422
BsrFI	RCCGGY	2 cut(s)	22, 316
BsrGI	TGTACA	1 cut(s)	1392
BsrI	ACTGG	4 cut(s)	774, 1207, 1450, 1586
BssAI	RCCGGY	2 cut(s)	22, 316
BssECI	CCNNGG	2 cut(s)	625, 1110
BssMI	GATC	8 cut(s)	84, 206, 284, 802, 953, 970, 1179, 1284
BssNI	GRCGYC	1 cut(s)	20
Bst2UI	CCWGG	2 cut(s)	812, 1616
Bst4CI	ACNGT	6 cut(s)	332, 568, 906, 1161, 1355, 1594
Bst6I	CTCTTC	6 cut(s)	233, 775, 936, 1044, 1126, 1509
BstACI	GRCGYC	1 cut(s)	20
BstAPI	GCANNNNNTGC	1 cut(s)	645
BstAUI	TGTACA	1 cut(s)	1392
BstC8I	GCNNGC	5 cut(s)	24, 28, 124, 545, 1741
BstDEI	CTNAG	5 cut(s)	81, 348, 423, 882, 1067
BstDSI	CCRYGG	1 cut(s)	625
BstF5I	GGATG	2 cut(s)	1611, 1640
BstFNI	CGCG	2 cut(s)	637, 990
BstH2I	RGCGCY	2 cut(s)	23, 266
BstHHI	GCGC	3 cut(s)	22, 265, 639
BstKTI	GATC	8 cut(s)	87, 209, 287, 805, 956, 973, 1182, 1287
BstMAI	GTCTC	7 cut(s)	273, 321, 502, 891, 1029, 1211, 1517
BstMBI	GATC	8 cut(s)	84, 206, 284, 802, 953, 970, 1179, 1284
BstMCI	CGRYCG	4 cut(s)	56, 287, 321, 1163
BstMWI	GCNNNNNNNGC	4 cut(s)	189, 645, 1505, 1707
BstNI	CCWGG	2 cut(s)	812, 1616
BstSCI	CCNGG	2 cut(s)	810, 1614
BstSFI	CTRYAG	3 cut(s)	127, 1208, 1550
BstUI	CGCG	2 cut(s)	637, 990
BstV1I	GCAGC	7 cut(s)	113, 992, 1486, 1536, 1564, 1588, 1610
BstV2I	GAAGAC	2 cut(s)	41, 425
BstX2I	RGATCY	4 cut(s)	84, 802, 970, 1284
BstXI	CCANNNNNNTGG	1 cut(s)	1540
BstYI	RGATCY	4 cut(s)	84, 802, 970, 1284
BstZI	CGGCCG	1 cut(s)	318
Bsu15I	ATCGAT	1 cut(s)	283
BsuRI	GGCC	7 cut(s)	137, 320, 697, 1143, 1322, 1532, 1585
BsuTUI	ATCGAT	1 cut(s)	283
BtgI	CCRYGG	1 cut(s)	625
BtsCI	GGATG	2 cut(s)	1611, 1640
BtsI	GCAGTG	2 cut(s)	136, 960
BtsIMutI	CAGTG	5 cut(s)	136, 500, 960, 1360, 1457
Cac8I	GCNNGC	5 cut(s)	24, 28, 124, 545, 1741
CaiI	CAGNNNCTG	2 cut(s)	962, 1066
CfoI	GCGC	3 cut(s)	22, 265, 639
Cfr10I	RCCGGY	2 cut(s)	22, 316
Cfr13I	GGNCC	5 cut(s)	1171, 1438, 1530, 1561, 1584
ClaI	ATCGAT	1 cut(s)	283
CseI	GACGC	1 cut(s)	621
Csp6I	GTAC	7 cut(s)	160, 732, 766, 1135, 1165, 1393, 1537
CviAII	CATG	4 cut(s)	1010, 1168, 1667, 1694
CviQI	GTAC	7 cut(s)	160, 732, 766, 1135, 1165, 1393, 1537
DdeI	CTNAG	5 cut(s)	81, 348, 423, 882, 1067
DinI	GGCGCC	1 cut(s)	21
DpnI	GATC	8 cut(s)	86, 208, 286, 804, 955, 972, 1181, 1286
DpnII	GATC	8 cut(s)	84, 206, 284, 802, 953, 970, 1179, 1284
DriI	GACNNNNNGTC	1 cut(s)	904
EaeI	YGGCCR	2 cut(s)	318, 1320
EagI	CGGCCG	1 cut(s)	318
Eam1104I	CTCTTC	6 cut(s)	233, 775, 936, 1044, 1126, 1509
Eam1105I	GACNNNNNGTC	1 cut(s)	904
EarI	CTCTTC	6 cut(s)	233, 775, 936, 1044, 1126, 1509
EclXI	CGGCCG	1 cut(s)	318
Eco147I	AGGCCT	1 cut(s)	137
Eco31I	GGTCTC	2 cut(s)	502, 1211
Eco32I	GATATC	1 cut(s)	1191
Eco47I	GGWCC	3 cut(s)	1171, 1438, 1561
Eco52I	CGGCCG	1 cut(s)	318
Eco57I	CTGAAG	5 cut(s)	53, 437, 477, 1274, 1524
EcoO109I	RGGNCCY	1 cut(s)	1438
EcoRI	GAATTC	2 cut(s)	620, 830
EcoRII	CCWGG	2 cut(s)	810, 1614
EcoRV	GATATC	1 cut(s)	1191
EcoT22I	ATGCAT	2 cut(s)	1642, 1703
EgeI	GGCGCC	1 cut(s)	21
EheI	GGCGCC	1 cut(s)	21
Esp3I	CGTCTC	4 cut(s)	273, 321, 1029, 1517
FaeI	CATG	4 cut(s)	1013, 1171, 1670, 1697
FatI	CATG	4 cut(s)	1009, 1167, 1666, 1693
FokI	GGATG	2 cut(s)	1598, 1627
FspBI	CTAG	4 cut(s)	1229, 1326, 1427, 1712
GlaI	GCGC	3 cut(s)	21, 264, 638
GsaI	CCCAGC	1 cut(s)	1651
GsuI	CTGGAG	2 cut(s)	1136, 1454
HaeII	RGCGCY	2 cut(s)	23, 266
HaeIII	GGCC	7 cut(s)	137, 320, 697, 1143, 1322, 1532, 1585
HapII	CCGG	8 cut(s)	23, 52, 70, 317, 324, 375, 611, 1174
HgaI	GACGC	1 cut(s)	621
HhaI	GCGC	3 cut(s)	22, 265, 639
Hin1I	GRCGYC	1 cut(s)	20
Hin1II	CATG	4 cut(s)	1013, 1171, 1670, 1697
Hin6I	GCGC	3 cut(s)	20, 263, 637
HinP1I	GCGC	3 cut(s)	20, 263, 637
HincII	GTYRAC	1 cut(s)	994
HindII	GTYRAC	1 cut(s)	994
HpaI	GTTAAC	1 cut(s)	994
HpaII	CCGG	8 cut(s)	23, 52, 70, 317, 324, 375, 611, 1174
HphI	GGTGA	7 cut(s)	232, 319, 344, 662, 850, 894, 1694
Hpy166II	GTNNAC	4 cut(s)	154, 994, 1237, 1393
Hpy188III	TCNNGA	4 cut(s)	375, 867, 951, 1273
Hpy8I	GTNNAC	4 cut(s)	154, 994, 1237, 1393
Hpy99I	CGWCG	7 cut(s)	109, 358, 637, 758, 853, 910, 1132
HpyAV	CCTTC	2 cut(s)	433, 1298
HpyCH4III	ACNGT	6 cut(s)	332, 568, 906, 1161, 1355, 1594
HpyF10VI	GCNNNNNNNGC	4 cut(s)	189, 645, 1505, 1707
HpyF3I	CTNAG	5 cut(s)	81, 348, 423, 882, 1067
Hsp92I	GRCGYC	1 cut(s)	20
Hsp92II	CATG	4 cut(s)	1013, 1171, 1670, 1697
HspAI	GCGC	3 cut(s)	20, 263, 637
KasI	GGCGCC	1 cut(s)	19
Kpn2I	TCCGGA	1 cut(s)	374
KroI	GCCGGC	1 cut(s)	22
KroNI	GCCGGC	1 cut(s)	24
KspAI	GTTAAC	1 cut(s)	994
Kzo9I	GATC	8 cut(s)	84, 206, 284, 802, 953, 970, 1179, 1284
LmnI	GCTCC	7 cut(s)	54, 58, 377, 514, 629, 764, 988
Lsp1109I	GCAGC	7 cut(s)	113, 992, 1486, 1536, 1564, 1588, 1610
LweI	GCATC	3 cut(s)	1053, 1627, 1649
MaeI	CTAG	4 cut(s)	1229, 1326, 1427, 1712
MaeIII	GTNAC	4 cut(s)	463, 599, 958, 1100
MalI	GATC	8 cut(s)	86, 208, 286, 804, 955, 972, 1181, 1286
MbiI	CCGCTC	1 cut(s)	429
MboI	GATC	8 cut(s)	84, 206, 284, 802, 953, 970, 1179, 1284
MfeI	CAATTG	1 cut(s)	548
MflI	RGATCY	4 cut(s)	84, 802, 970, 1284
MhlI	GDGCHC	2 cut(s)	557, 610
MlsI	TGGCCA	1 cut(s)	1322
MluI	ACGCGT	1 cut(s)	988
MluNI	TGGCCA	1 cut(s)	1322
Mly113I	GGCGCC	1 cut(s)	20
MlyI	GAGTC	6 cut(s)	194, 359, 374, 494, 710, 893
MmeI	TCCRAC	4 cut(s)	36, 184, 874, 1279
Mox20I	TGGCCA	1 cut(s)	1322
Mph1103I	ATGCAT	2 cut(s)	1642, 1703
MroI	TCCGGA	1 cut(s)	374
MroNI	GCCGGC	1 cut(s)	22
MscI	TGGCCA	1 cut(s)	1322
MseI	TTAA	3 cut(s)	279, 993, 1256
MslI	CAYNNNNRTG	1 cut(s)	1667
Msp20I	TGGCCA	1 cut(s)	1322
MspA1I	CMGCKG	1 cut(s)	1601
MspI	CCGG	8 cut(s)	23, 52, 70, 317, 324, 375, 611, 1174
MspR9I	CCNGG	2 cut(s)	812, 1616
MunI	CAATTG	1 cut(s)	548
Mva1269I	GAATGC	2 cut(s)	124, 1703
MvaI	CCWGG	2 cut(s)	812, 1616
MvnI	CGCG	2 cut(s)	637, 990
MwoI	GCNNNNNNNGC	4 cut(s)	189, 645, 1505, 1707
NaeI	GCCGGC	1 cut(s)	24
NarI	GGCGCC	1 cut(s)	20
NdeII	GATC	8 cut(s)	84, 206, 284, 802, 953, 970, 1179, 1284
NgoMIV	GCCGGC	1 cut(s)	22
NlaIII	CATG	4 cut(s)	1013, 1171, 1670, 1697
NlaIV	GGNNCC	5 cut(s)	21, 760, 804, 1286, 1563
NmuCI	GTSAC	2 cut(s)	958, 1100
NsiI	ATGCAT	2 cut(s)	1642, 1703
OliI	CACNNNNGTG	1 cut(s)	1667
PceI	AGGCCT	1 cut(s)	137
PcsI	WCGNNNNNNNCGW	6 cut(s)	73, 113, 185, 255, 732, 759
PctI	GAATGC	2 cut(s)	124, 1703
PdiI	GCCGGC	1 cut(s)	24
PfeI	GAWTC	5 cut(s)	94, 470, 677, 863, 1147
Ple19I	CGATCG	1 cut(s)	287
PleI	GAGTC	6 cut(s)	193, 358, 373, 493, 710, 893
PluTI	GGCGCC	1 cut(s)	23
PpsI	GAGTC	6 cut(s)	193, 358, 373, 493, 710, 893
PpuMI	RGGWCCY	1 cut(s)	1438
Psp5II	RGGWCCY	1 cut(s)	1438
Psp6I	CCWGG	2 cut(s)	810, 1614
PspFI	CCCAGC	1 cut(s)	1647
PspGI	CCWGG	2 cut(s)	810, 1614
PspN4I	GGNNCC	5 cut(s)	21, 760, 804, 1286, 1563
PspPI	GGNCC	5 cut(s)	1171, 1438, 1530, 1561, 1584
PspPPI	RGGWCCY	1 cut(s)	1438
PstI	CTGCAG	2 cut(s)	131, 1554
PstNI	CAGNNNCTG	2 cut(s)	962, 1066
PsuI	RGATCY	4 cut(s)	84, 802, 970, 1284
PvuI	CGATCG	1 cut(s)	287
PvuII	CAGCTG	1 cut(s)	1601
RsaI	GTAC	7 cut(s)	161, 733, 767, 1136, 1166, 1394, 1538
RsaNI	GTAC	7 cut(s)	160, 732, 766, 1135, 1165, 1393, 1537
RseI	CAYNNNNRTG	1 cut(s)	1667
SaqAI	TTAA	3 cut(s)	279, 993, 1256
Sau3AI	GATC	8 cut(s)	84, 206, 284, 802, 953, 970, 1179, 1284
Sau96I	GGNCC	5 cut(s)	1171, 1438, 1530, 1561, 1584
ScaI	AGTACT	2 cut(s)	767, 1538
SchI	GAGTC	6 cut(s)	194, 359, 374, 494, 710, 893
ScrFI	CCNGG	2 cut(s)	812, 1616
SduI	GDGCHC	2 cut(s)	557, 610
SfaNI	GCATC	3 cut(s)	1053, 1627, 1649
SfcI	CTRYAG	3 cut(s)	127, 1208, 1550
SfoI	GGCGCC	1 cut(s)	21
SinI	GGWCC	3 cut(s)	1171, 1438, 1561
SmiMI	CAYNNNNRTG	1 cut(s)	1667
SmlI	CTYRAG	1 cut(s)	1025
SmoI	CTYRAG	1 cut(s)	1025
SseBI	AGGCCT	1 cut(s)	137
SsiI	CCGC	8 cut(s)	168, 305, 321, 429, 597, 648, 1140, 1680
SspDI	GGCGCC	1 cut(s)	19
SspMI	CTAG	4 cut(s)	1229, 1326, 1427, 1712
StuI	AGGCCT	1 cut(s)	137
StyD4I	CCNGG	2 cut(s)	810, 1614
TaaI	ACNGT	6 cut(s)	332, 568, 906, 1161, 1355, 1594
TaqI	TCGA	7 cut(s)	12, 188, 227, 283, 287, 680, 950
TaqII	GACCGA	1 cut(s)	1263
TatI	WGTACW	3 cut(s)	765, 1392, 1536
TauI	GCSGC	3 cut(s)	171, 323, 1143
TfiI	GAWTC	5 cut(s)	94, 470, 677, 863, 1147
Tru1I	TTAA	3 cut(s)	279, 993, 1256
Tru9I	TTAA	3 cut(s)	279, 993, 1256
TscAI	CASTG	5 cut(s)	136, 507, 967, 1360, 1457
TseFI	GTSAC	2 cut(s)	958, 1100
TseI	GCWGC	7 cut(s)	126, 980, 1499, 1549, 1552, 1598, 1601
Tsp45I	GTSAC	2 cut(s)	958, 1100
TspDTI	ATGAA	3 cut(s)	1026, 1527, 1710
TspGWI	ACGGA	3 cut(s)	190, 642, 1145
TspRI	CASTG	5 cut(s)	136, 507, 967, 1360, 1457
VpaK11BI	GGWCC	3 cut(s)	1171, 1438, 1561
XapI	RAATTY	6 cut(s)	174, 506, 614, 620, 655, 830
XspI	CTAG	4 cut(s)	1229, 1326, 1427, 1712
ZrmI	AGTACT	2 cut(s)	767, 1538
Zsp2I	ATGCAT	2 cut(s)	1642, 1703

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.