RLG00000009493

Mediates both low-affinity uptake and efflux of sugar across the membrane

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
53575795 .. 53580677
4883 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009493

Sequence Viewer

Length: 534 bp
ATGTATATTGTTTATGCAACAAAGGCTTCAAGGAAATTCACTATCAAGTTCCTCGGGTTTATGAACTTCAGACTCTTCTCCTTGATCCTTGTCCTTTTACACTATGCATTTCATAGTCAATACCGTGCCCGGTTCTCGGATGTATCAACGTTGCCATTTCGGTTTGTGTTTTTGCAGCGCCCTTGGAGTATTGTGAATGTTGTAGTAATTGTGCATGGTCTCGAATCTTTTTACGATATTTTGCAGCTCGCAGCACGCACGTCGAAGAAGGAGGACGATGCAGCTGACAAGACAAAAGAAGCAGCAGATGCAGTTAAAGATGGAGCTAAAGAAGTGAGACAGACCTGCGAATTCATGAGGGACACCGTAGAAACCACTGCCAAAACCATGGGCAAAGCGACTAAGGAGGCGACGGAGAAAGTAACGGAAACAGCAGAAACCATCACAGAGAAAACAAAGGGCACCGTTTCAGGTGCATGGGGGATGGCCAAGAATACTACTGAGATTATCAAGGACAAAGTAATGGGCAAGTGA

Protein Analysis

178

Amino Acids

20.04

Weight (kDa)

9.45

Isoelectric Point (pI)

25.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0016689)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04670
fragaria_vesca FvH4_4g05720
malus_domestica MD00G1100800.v1.1
prunus_persica Prupe.1G060600_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0396891
rosa_laevigata RLG00000009493
rosa_multiflora Rmu_sc0008929.1_g000008
rosa_rugosa Rorug03G0346300 Rorug03G0346400
rosa_samantha Rh4AG073800 Rh4BG071400 Rh4CG079600 Rh4DG068800
rosa_wichuraiana Rw4G006000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 353
AccB1I GGYRCC 1 cut(s) 461
AclI AACGTT 1 cut(s) 149
AclWI GGATC 1 cut(s) 79
AcoI YGGCCR 1 cut(s) 486
AcsI RAATTY 2 cut(s) 35, 350
AcuI CTGAAG 1 cut(s) 52
AfiI CCNNNNNNNGG 1 cut(s) 136
AgsI TTSAA 1 cut(s) 30
AjiI CACGTC 1 cut(s) 261
AluBI AGCT 3 cut(s) 247, 284, 326
AluI AGCT 3 cut(s) 247, 284, 326
Alw26I GTCTC 2 cut(s) 224, 331
AlwI GGATC 1 cut(s) 79
Ama87I CYCGRG 1 cut(s) 53
AoxI GGCC 1 cut(s) 486
ApeKI GCWGC 5 cut(s) 175, 244, 251, 281, 302
ApoI RAATTY 2 cut(s) 35, 350
AspLEI GCGC 1 cut(s) 180
AsuC2I CCSGG 1 cut(s) 130
AvaI CYCGRG 1 cut(s) 53
BaeGI GKGCMC 2 cut(s) 130, 464
BalI TGGCCA 1 cut(s) 488
BanI GGYRCC 1 cut(s) 461
BbvI GCAGC 5 cut(s) 187, 256, 263, 293, 314
BccI CCATC 3 cut(s) 314, 449, 478
BcgI CGANNNNNNTGC 2 cut(s) 243, 277
BcnI CCSGG 1 cut(s) 130
BcoDI GTCTC 2 cut(s) 224, 331
BfoI RGCGCY 1 cut(s) 181
BfuAI ACCTGC 1 cut(s) 353
BisI GCNGC 5 cut(s) 176, 245, 252, 282, 303
BlsI GCNGC 5 cut(s) 177, 246, 253, 283, 304
Bme1390I CCNGG 1 cut(s) 130
BmeT110I CYCGRG 1 cut(s) 53
BmgBI CACGTC 1 cut(s) 261
BmiI GGNNCC 1 cut(s) 463
BmrFI CCNGG 1 cut(s) 130
BmsI GCATC 2 cut(s) 268, 298
BpuMI CCSGG 1 cut(s) 130
BsaI GGTCTC 1 cut(s) 224
BsaJI CCNNGG 3 cut(s) 52, 182, 387
Bsc4I CCNNNNNNNGG 1 cut(s) 136
BseDI CCNNGG 3 cut(s) 52, 182, 387
BseGI GGATG 2 cut(s) 145, 489
BseLI CCNNNNNNNGG 1 cut(s) 136
BseMII CTCAG 1 cut(s) 492
BseSI GKGCMC 2 cut(s) 130, 464
BseXI GCAGC 5 cut(s) 187, 256, 263, 293, 314
BshFI GGCC 1 cut(s) 488
BshNI GGYRCC 1 cut(s) 461
BsiHKCI CYCGRG 1 cut(s) 53
BsiSI CCGG 1 cut(s) 130
BslFI GGGAC 1 cut(s) 374
BslI CCNNNNNNNGG 1 cut(s) 136
BsmAI GTCTC 2 cut(s) 224, 331
BsmFI GGGAC 1 cut(s) 374
BsnI GGCC 1 cut(s) 488
Bso31I GGTCTC 1 cut(s) 224
BsoBI CYCGRG 1 cut(s) 53
Bsp1286I GDGCHC 2 cut(s) 130, 464
Bsp143I GATC 1 cut(s) 84
Bsp19I CCATGG 1 cut(s) 387
BspANI GGCC 1 cut(s) 488
BspCNI CTCAG 1 cut(s) 493
BspHI TCATGA 1 cut(s) 354
BspLI GGNNCC 1 cut(s) 463
BspMI ACCTGC 1 cut(s) 353
BspPI GGATC 1 cut(s) 79
BspT107I GGYRCC 1 cut(s) 461
BspTNI GGTCTC 1 cut(s) 224
BssECI CCNNGG 3 cut(s) 52, 182, 387
BssMI GATC 1 cut(s) 84
BssT1I CCWWGG 2 cut(s) 182, 387
Bst4CI ACNGT 3 cut(s) 125, 367, 466
Bst6I CTCTTC 1 cut(s) 80
BstAPI GCANNNNNTGC 1 cut(s) 308
BstC8I GCNNGC 2 cut(s) 249, 256
BstDEI CTNAG 2 cut(s) 402, 501
BstDSI CCRYGG 1 cut(s) 387
BstF5I GGATG 2 cut(s) 145, 489
BstH2I RGCGCY 1 cut(s) 181
BstHHI GCGC 1 cut(s) 180
BstKTI GATC 1 cut(s) 87
BstMAI GTCTC 2 cut(s) 224, 331
BstMBI GATC 1 cut(s) 84
BstMWI GCNNNNNNNGC 2 cut(s) 23, 308
BstSCI CCNGG 1 cut(s) 128
BstSLI GKGCMC 2 cut(s) 130, 464
BstV1I GCAGC 5 cut(s) 187, 256, 263, 293, 314
BstXI CCANNNNNNTGG 1 cut(s) 388
BsuRI GGCC 1 cut(s) 488
BtgI CCRYGG 1 cut(s) 387
BtrI CACGTC 1 cut(s) 261
BtsCI GGATG 2 cut(s) 145, 489
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 1 cut(s) 375
BveI ACCTGC 1 cut(s) 353
Cac8I GCNNGC 2 cut(s) 249, 256
CciI TCATGA 1 cut(s) 354
CfoI GCGC 1 cut(s) 180
CviAII CATG 4 cut(s) 215, 355, 388, 477
CviJI RGCY 5 cut(s) 26, 247, 284, 326, 488
CviKI_1 RGCY 5 cut(s) 26, 247, 284, 326, 488
DdeI CTNAG 2 cut(s) 402, 501
DpnI GATC 1 cut(s) 86
DpnII GATC 1 cut(s) 84
EaeI YGGCCR 1 cut(s) 486
Eam1104I CTCTTC 1 cut(s) 80
EarI CTCTTC 1 cut(s) 80
Eco130I CCWWGG 2 cut(s) 182, 387
Eco31I GGTCTC 1 cut(s) 224
Eco57I CTGAAG 1 cut(s) 52
Eco88I CYCGRG 1 cut(s) 53
EcoRI GAATTC 1 cut(s) 350
EcoT14I CCWWGG 2 cut(s) 182, 387
EcoT22I ATGCAT 1 cut(s) 109
ErhI CCWWGG 2 cut(s) 182, 387
FaeI CATG 4 cut(s) 218, 358, 391, 480
FaiI YATR 9 cut(s) 6, 15, 62, 105, 114, 216, 356, 389, 478
FaqI GGGAC 1 cut(s) 374
FatI CATG 4 cut(s) 214, 354, 387, 476
Fnu4HI GCNGC 5 cut(s) 176, 245, 252, 282, 303
FokI GGATG 2 cut(s) 152, 496
Fsp4HI GCNGC 5 cut(s) 176, 245, 252, 282, 303
GlaI GCGC 1 cut(s) 179
GluI GCNGC 5 cut(s) 176, 245, 252, 282, 303
HaeII RGCGCY 1 cut(s) 181
HaeIII GGCC 1 cut(s) 488
HapII CCGG 1 cut(s) 130
HhaI GCGC 1 cut(s) 180
Hin1II CATG 4 cut(s) 218, 358, 391, 480
Hin6I GCGC 1 cut(s) 178
HinP1I GCGC 1 cut(s) 178
HinfI GANTC 2 cut(s) 72, 224
HpaII CCGG 1 cut(s) 130
Hpy188I TCNGA 2 cut(s) 71, 139
Hpy188III TCNNGA 2 cut(s) 221, 355
Hpy99I CGWCG 2 cut(s) 265, 415
HpyAV CCTTC 1 cut(s) 262
HpyCH4III ACNGT 3 cut(s) 125, 367, 466
HpyCH4IV ACGT 2 cut(s) 149, 260
HpyCH4V TGCA 8 cut(s) 17, 107, 175, 214, 244, 281, 311, 476
HpyF10VI GCNNNNNNNGC 2 cut(s) 23, 308
HpyF3I CTNAG 2 cut(s) 402, 501
HpySE526I ACGT 2 cut(s) 149, 260
Hsp92II CATG 4 cut(s) 218, 358, 391, 480
HspAI GCGC 1 cut(s) 178
Kzo9I GATC 1 cut(s) 84
LmnI GCTCC 1 cut(s) 323
LpnPI CCDG 3 cut(s) 143, 358, 456
Lsp1109I GCAGC 5 cut(s) 187, 256, 263, 293, 314
LweI GCATC 2 cut(s) 268, 298
MaeII ACGT 2 cut(s) 149, 260
MaeIII GTNAC 1 cut(s) 421
MalI GATC 1 cut(s) 86
MboI GATC 1 cut(s) 84
MboII GAAGA 2 cut(s) 67, 277
MhlI GDGCHC 2 cut(s) 130, 464
MlsI TGGCCA 1 cut(s) 488
MluCI AATT 3 cut(s) 35, 207, 350
MluNI TGGCCA 1 cut(s) 488
MlyI GAGTC 1 cut(s) 66
MnlI CCTC 4 cut(s) 62, 265, 351, 400
Mox20I TGGCCA 1 cut(s) 488
Mph1103I ATGCAT 1 cut(s) 109
MscI TGGCCA 1 cut(s) 488
MseI TTAA 1 cut(s) 315
Msp20I TGGCCA 1 cut(s) 488
MspA1I CMGCKG 1 cut(s) 284
MspI CCGG 1 cut(s) 130
MspR9I CCNGG 1 cut(s) 130
MwoI GCNNNNNNNGC 2 cut(s) 23, 308
NciI CCSGG 1 cut(s) 130
NcoI CCATGG 1 cut(s) 387
NdeII GATC 1 cut(s) 84
NlaIII CATG 4 cut(s) 218, 358, 391, 480
NlaIV GGNNCC 1 cut(s) 463
NsiI ATGCAT 1 cut(s) 109
PagI TCATGA 1 cut(s) 354
PfeI GAWTC 1 cut(s) 224
PkrI GCNGC 5 cut(s) 177, 246, 253, 283, 304
PleI GAGTC 1 cut(s) 66
PpsI GAGTC 1 cut(s) 66
Psp1406I AACGTT 1 cut(s) 149
PspN4I GGNNCC 1 cut(s) 463
PvuII CAGCTG 1 cut(s) 284
SaqAI TTAA 1 cut(s) 315
SatI GCNGC 5 cut(s) 176, 245, 252, 282, 303
Sau3AI GATC 1 cut(s) 84
SchI GAGTC 1 cut(s) 66
ScrFI CCNGG 1 cut(s) 130
SduI GDGCHC 2 cut(s) 130, 464
SetI ASST 7 cut(s) 152, 249, 263, 286, 328, 347, 475
SfaNI GCATC 2 cut(s) 268, 298
Sse9I AATT 3 cut(s) 35, 207, 350
StyD4I CCNGG 1 cut(s) 128
StyI CCWWGG 2 cut(s) 182, 387
TaaI ACNGT 3 cut(s) 125, 367, 466
TaiI ACGT 2 cut(s) 152, 263
TaqI TCGA 2 cut(s) 222, 263
TasI AATT 3 cut(s) 35, 207, 350
TfiI GAWTC 1 cut(s) 224
Tru1I TTAA 1 cut(s) 315
Tru9I TTAA 1 cut(s) 315
TscAI CASTG 1 cut(s) 382
TseI GCWGC 5 cut(s) 175, 244, 251, 281, 302
TspDTI ATGAA 3 cut(s) 77, 101, 343
TspGWI ACGGA 2 cut(s) 428, 440
TspRI CASTG 1 cut(s) 382
XapI RAATTY 2 cut(s) 35, 350
Zsp2I ATGCAT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.