RLG00000014329

Protein tyrosine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0030709
Physical Location & Seq
Forward (+)
51529102 .. 51531325
2224 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014329

Sequence Viewer

Length: 504 bp
ATGGAAATTCAGACATATTTCGAGGAGGCTTGCAACAACACTAGAGTAATTGGCGAATCAAGTAATGGTTCTTACTATTACTTAGTATTTCCTTATATCCCACTCAACTTGGGTGAGTTTCTACATGCTGGGCCAATCCCGATTGCGCAAGCCCGAAGGCTTCTGCATAATATTTTAACTGGCTTTTGGACTATACATCAAGCTAATTGTGTTCACAGGAATCTGTCGTTCATACTAATTGAAGTAACAGACCCACAGAATGTGAGAGCCATTGTTGATGGGTACCAGTCTTCTCGCCCTAAGGGTTGTCTTGAACATAAACTCTCCCCTCTCAGATGTCTTGGGATATTGAGATTCAAAGCTCCAGAGCTTTTGCTTGGGCAAAGGGATCCAAATGACCTTGCAATGGTTGAGAAACTAGATGAGGAAGAAATGCGTTCAGGGGAAGAAGAGGCCGTGGCTCCGGAAGTAGTGGACTCAGGCTCTGACTTTGATGATGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006355 GO:0006357 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008047 GO:0008144 GO:0008150 GO:0008152 GO:0009889 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016538 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019207 GO:0019209 GO:0019219 GO:0019220 GO:0019222 GO:0019538 GO:0019887 GO:0019912 GO:0023052 GO:0030234 GO:0030295 GO:0030554 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032553 GO:0032555 GO:0032559 GO:0033674 GO:0035639 GO:0036094 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051252 GO:0051338 GO:0051347 GO:0051445 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0097159 GO:0097367 GO:0098772 GO:0140096 GO:1901265 GO:1901363 GO:1901407 GO:1901409 GO:1901564 GO:1903506 GO:1904029 GO:1904031 GO:2000112 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04111 map04111
Pfam Domains
Protein Families
KIX_2 Pkinase

Protein Analysis

168

Amino Acids

18.88

Weight (kDa)

4.78

Isoelectric Point (pI)

55.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0030709)

Species Orthologous Gene IDs
rosa_laevigata RLG00000014329 RLG00000018428

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 147
Acc65I GGTACC 1 cut(s) 282
AccB1I GGYRCC 1 cut(s) 282
AccIII TCCGGA 1 cut(s) 463
AclWI GGATC 2 cut(s) 383, 396
AcsI RAATTY 1 cut(s) 6
AfaI GTAC 1 cut(s) 284
AfiI CCNNNNNNNGG 1 cut(s) 406
AgsI TTSAA 3 cut(s) 242, 314, 358
AluBI AGCT 3 cut(s) 203, 362, 370
AluI AGCT 3 cut(s) 203, 362, 370
AlwI GGATC 2 cut(s) 383, 396
AlwNI CAGNNNCTG 1 cut(s) 485
Aor13HI TCCGGA 1 cut(s) 463
AoxI GGCC 2 cut(s) 131, 453
ApoI RAATTY 1 cut(s) 6
Asp718I GGTACC 1 cut(s) 282
AspLEI GCGC 1 cut(s) 148
AspS9I GGNCC 1 cut(s) 131
AsuHPI GGTGA 1 cut(s) 125
AxyI CCTNAGG 1 cut(s) 300
BamHI GGATCC 1 cut(s) 388
BanI GGYRCC 1 cut(s) 282
BbsI GAAGAC 1 cut(s) 282
BccI CCATC 1 cut(s) 272
BceAI ACGGC 1 cut(s) 440
BfaI CTAG 2 cut(s) 42, 419
BmgT120I GGNCC 1 cut(s) 131
BmiI GGNNCC 3 cut(s) 284, 390, 462
BpiI GAAGAC 1 cut(s) 282
BpmI CTGGAG 1 cut(s) 348
BsaJI CCNNGG 1 cut(s) 456
BsaWI WCCGGW 1 cut(s) 463
Bsc4I CCNNNNNNNGG 1 cut(s) 406
Bse1I ACTGG 2 cut(s) 184, 286
Bse21I CCTNAGG 1 cut(s) 300
Bse3DI GCAATG 1 cut(s) 411
BseAI TCCGGA 1 cut(s) 463
BseDI CCNNGG 1 cut(s) 456
BseLI CCNNNNNNNGG 1 cut(s) 406
BseMI GCAATG 1 cut(s) 411
BseMII CTCAG 2 cut(s) 346, 492
BseNI ACTGG 2 cut(s) 184, 286
BseRI GAGGAG 1 cut(s) 38
BseYI CCCAGC 1 cut(s) 128
BshFI GGCC 2 cut(s) 133, 455
BshNI GGYRCC 1 cut(s) 282
BsiSI CCGG 1 cut(s) 464
BslI CCNNNNNNNGG 1 cut(s) 406
BsnI GGCC 2 cut(s) 133, 455
Bsp13I TCCGGA 1 cut(s) 463
Bsp143I GATC 1 cut(s) 388
BspANI GGCC 2 cut(s) 133, 455
BspCNI CTCAG 2 cut(s) 345, 491
BspEI TCCGGA 1 cut(s) 463
BspLI GGNNCC 3 cut(s) 284, 390, 462
BspPI GGATC 2 cut(s) 383, 396
BspT107I GGYRCC 1 cut(s) 282
BsrDI GCAATG 1 cut(s) 411
BsrI ACTGG 2 cut(s) 184, 286
BssECI CCNNGG 1 cut(s) 456
BssMI GATC 1 cut(s) 388
Bst6I CTCTTC 1 cut(s) 444
BstC8I GCNNGC 2 cut(s) 31, 150
BstDEI CTNAG 4 cut(s) 82, 300, 332, 478
BstDSI CCRYGG 1 cut(s) 456
BstHHI GCGC 1 cut(s) 148
BstKTI GATC 1 cut(s) 391
BstMBI GATC 1 cut(s) 388
BstNSI RCATGY 1 cut(s) 128
BstV2I GAAGAC 1 cut(s) 282
BstX2I RGATCY 1 cut(s) 388
BstYI RGATCY 1 cut(s) 388
Bsu36I CCTNAGG 1 cut(s) 300
BsuRI GGCC 2 cut(s) 133, 455
BtgI CCRYGG 1 cut(s) 456
Cac8I GCNNGC 2 cut(s) 31, 150
CaiI CAGNNNCTG 1 cut(s) 485
CfoI GCGC 1 cut(s) 148
Cfr13I GGNCC 1 cut(s) 131
Csp6I GTAC 1 cut(s) 283
CspCI CAANNNNNGTGG 2 cut(s) 90, 125
CviAII CATG 1 cut(s) 125
CviQI GTAC 1 cut(s) 283
DdeI CTNAG 4 cut(s) 82, 300, 332, 478
DpnI GATC 1 cut(s) 390
DpnII GATC 1 cut(s) 388
Eam1104I CTCTTC 1 cut(s) 444
EarI CTCTTC 1 cut(s) 444
Eco81I CCTNAGG 1 cut(s) 300
FaeI CATG 1 cut(s) 128
FaiI YATR 7 cut(s) 16, 96, 126, 168, 194, 233, 318
FatI CATG 1 cut(s) 124
FspBI CTAG 2 cut(s) 42, 419
FspI TGCGCA 1 cut(s) 147
GlaI GCGC 1 cut(s) 147
GsaI CCCAGC 1 cut(s) 132
GsuI CTGGAG 1 cut(s) 348
HaeIII GGCC 2 cut(s) 133, 455
HapII CCGG 1 cut(s) 464
HhaI GCGC 1 cut(s) 148
Hin1II CATG 1 cut(s) 128
Hin6I GCGC 1 cut(s) 146
HinP1I GCGC 1 cut(s) 146
HinfI GANTC 4 cut(s) 56, 220, 354, 476
HpaII CCGG 1 cut(s) 464
HphI GGTGA 1 cut(s) 125
Hpy166II GTNNAC 2 cut(s) 214, 475
Hpy188I TCNGA 3 cut(s) 12, 335, 487
Hpy188III TCNNGA 4 cut(s) 139, 311, 365, 464
Hpy8I GTNNAC 2 cut(s) 214, 475
HpyAV CCTTC 1 cut(s) 150
HpyCH4V TGCA 3 cut(s) 33, 166, 404
HpyF3I CTNAG 4 cut(s) 82, 300, 332, 478
Hsp92II CATG 1 cut(s) 128
HspAI GCGC 1 cut(s) 146
Kpn2I TCCGGA 1 cut(s) 463
KpnI GGTACC 1 cut(s) 286
Kzo9I GATC 1 cut(s) 388
LmnI GCTCC 2 cut(s) 367, 466
LpnPI CCDG 8 cut(s) 114, 165, 202, 299, 378, 426, 465, 477
MaeI CTAG 2 cut(s) 42, 419
MaeIII GTNAC 1 cut(s) 244
MalI GATC 1 cut(s) 390
MboI GATC 1 cut(s) 388
MboII GAAGA 4 cut(s) 282, 440, 458, 461
MflI RGATCY 1 cut(s) 388
MluCI AATT 4 cut(s) 6, 48, 205, 237
MlyI GAGTC 1 cut(s) 470
MnlI CCTC 5 cut(s) 16, 19, 339, 418, 445
MroI TCCGGA 1 cut(s) 463
MseI TTAA 1 cut(s) 176
MspI CCGG 1 cut(s) 464
NdeII GATC 1 cut(s) 388
NlaIII CATG 1 cut(s) 128
NlaIV GGNNCC 3 cut(s) 284, 390, 462
NsbI TGCGCA 1 cut(s) 147
NspI RCATGY 1 cut(s) 128
PfeI GAWTC 3 cut(s) 56, 220, 354
PleI GAGTC 1 cut(s) 470
PpsI GAGTC 1 cut(s) 470
PspFI CCCAGC 1 cut(s) 128
PspN4I GGNNCC 3 cut(s) 284, 390, 462
PspPI GGNCC 1 cut(s) 131
PstNI CAGNNNCTG 1 cut(s) 485
PsuI RGATCY 1 cut(s) 388
RsaI GTAC 1 cut(s) 284
RsaNI GTAC 1 cut(s) 283
SaqAI TTAA 1 cut(s) 176
Sau3AI GATC 1 cut(s) 388
Sau96I GGNCC 1 cut(s) 131
SchI GAGTC 1 cut(s) 470
SetI ASST 4 cut(s) 205, 364, 372, 402
Sse9I AATT 4 cut(s) 6, 48, 205, 237
SspI AATATT 1 cut(s) 172
SspMI CTAG 2 cut(s) 42, 419
TaqI TCGA 1 cut(s) 21
TasI AATT 4 cut(s) 6, 48, 205, 237
TfiI GAWTC 3 cut(s) 56, 220, 354
Tru1I TTAA 1 cut(s) 176
Tru9I TTAA 1 cut(s) 176
TspDTI ATGAA 1 cut(s) 220
XapI RAATTY 1 cut(s) 6
XceI RCATGY 1 cut(s) 128
XspI CTAG 2 cut(s) 42, 419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.