Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0021379

Physical Location & Seq

Genomic Coordinates Reverse (-)

21143986 .. 21156229

Gene Structure 12244 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023285

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3216 bp

ATGGAAAGCTACTTGCACAAGGACTTCGACGTCCAGCACAAGCACCTCTCGCCGGAGGCCTCAAGCAATTGGAGGAAAGCCGTCAGCCGCGTCGTCAAGAACCCCGCCAGGAGGTTCCGACATCTCGCCGATCTTGACAAGCGTGCCGAGGCTGAGAGGAAGAAGAAGCAAATCCAGGAAAAAATTCGAGTTGCTCTTTATGTTCAAAAAGCAGCACTACAATTCATTGAGGCTCAAGAGAGTCAACCAGTTACTGATCAGGTTGAATACAAACTGTCTGAAGAGGCCGAAAAAGAGGGTTTCAGCATTCATCCAGATGAACTTGCATCAATCACACACAGCCATGATATTGGGGTCTTGAAAAGCCACGGTGGAGTTGATGGGATTTCAACAAAATTATCCGTCATGCCAGATGAAGGTGTCAGGGGTAGCAGTATACCAACAAGGCAAAATGTTTATGGCTTAAACCGTTATACGGAGAAACCTCCCCGATCATTCTTGGTGTTTTTATGGAAATCTCTACAGGATTTAACTTTAATTATTCTTATGGTCTGTACCACGGTTTCAATTGGAGTGGGACTTGCTACTGAAGGGTGGCCAGAAGGCATGTATGATGGGGTGGGAATTTTTCTGATCAGTATAGTTTTAGTTGTTTTGGTCACTGCCATTGGTGATTACAGGCAGTCCATGCAATTCAAGGATTTGGACAGGGAGAAGAAAAAGATTTTTATTCAGGTAACTAGGGATGGGAAAAGACAAAAAGTTTCCATTTATGATTTGCTGGTGGGAGATATTGTTCATTTGGCAGTGGGTGACCAAGTTCCAGCAGATGGACTTTTCATATCAGGTTATAGCATGTTGATTGATGAGTCAAGCTTGTCAGGTGATGAGAGTGAGCCAGTGAATGTATATGAAAAAAACTCTTTTCTTCTTTCGGGAACCAAAGTGCAAGACGGGTCAGGTAAAATGCTGGTAACAACAGTTGGTATGAGGACCGAATGGGGAAAGTTGATGGAAACTCTGAGTGAGGGAGGGGAAGATGAGACCCCACTGCAGGTGAAGCTGAATGGTGTTGCTACAATTATTGGTAAAATTGGTTTGGCTTTTGCTGTGGTGACATTTTTGGTCTTGACAGTAGGATTTTTGGTGGAAAAAGCACTTAGCAATGAGATCACAGATTGGTCTTCAACTGATGCAATGACACTTTTGAACTACTTTGCCATTGCAGTAACTATAATTGTTGTTGCAGTTCCTGAAGGATTACCATTGGCAGTAACACTGAGTCTTGCTTTTGCAATGAAGAAATTAATGAATGATAAGGCACTTGTGAGGCATCTCTCAGCTTGCGAGACAGTGGGTTCTGCTAGTTGCATTTGCACGGATAAAACAGGAACATTAACCACAAACCATATGGTAGATACCAAGATATGGATAGATGAAAAATCTATAGATGTAAAAGGTAATGAGAGTAAAGACGTAGTAAAATCAGAAATGGAGAGCTACTTACCCAAGGACTTCGAAGTCCAGCACAAGCACCTCTCGCCGGAGGCTTCAAGCAATTGGAGGAAAGCCGTCGGCCTCATCGTCAAGAACCGGAACAGAGGGTTCCGACATGTCGCCAATCTTGCTAAGCGCGCCGAGGCTGAGAGGAAAAAGAAGCAAATCCAGGAAATTCGAGTTGCTCCTTATGTTCACAAAGCAGCACTAGCAGTCATTGAGCGTATCATCTTTAAACTTTTAGCTGGAGAGAGTCAACTAGTTTCTGATCAGGTTGAATACAAACTGTCTGAAGAGGCCGAAAAAGAGGGTTTCAGCATTCACTCAGATGAACTTGCATCAATCATACGCAGCCATGATATTAAGGTCTTGAAAAGACACGGTGGAGTTGATGGGATTTTAACAAAAGTATCCGTAGTACCAGATGAAGGTGTCAGGAGTAGCAGTATATCAACAAGGCAAAATGTTTATGGCTTAAACCGCTATACGGAGAAACCTCCCCGATCATTCTTGGTGTTTGTATGGGAAGCTCTACAGGATTTAACTTTCATTAAGCTTATGGTTTGTGCCATGGTTTCAATTGGAGTGGGACTTGCTACTGACGGCTGGCCAGAAGGCATGTATGATGGGGTGGGAATTTTACTCAGTATAGTTTTAGTTGTTTTGGTCACTGCCATTAGTGATTACAGGCAGTCCATGCAATTCAAGGATTTGGACAGGGAGAAGAAAAAGATTTTTATTCAGGTCACTAGGGATGGGAAAAGACAAACAGTTTCCATTTATGATTTGCTGGTGGGAGATATTGTTCATTTGGCAGTGGGTGACCAAGTTCCAGCAGATGGACTTTTCATATCAGGTTATAGCATATTGATTGATGAGTCAAGCTTGTCAGGTGATGAGAGTGAGCCAGTGAATGTATATGAAAAAAACCCTTTTCTTCTTTCGGGAACCAGAGTGCAAGACGGGTCAGGTAAAATGCTGGTAACAACAGTTGGTATGAGGACCGAATGGGGAAAGTTGATGGAAACTCTGAGTGAGGGAGGAGAAGATGAGACCCCACTGCAGGTGAAGCTGAATGGTGTTGCTACAATTATTGGTAAAATTGGTTTGGCTTTTGCTGTGGTGACATTTTTGGTCTTGACAGTAAGATCTTTGGTGGAAAAAGCACTTAGCAATGAGATCACAGATTGGTCTTCAACTGATGCAATGACACTTTTGAACTACTTTGCTATTGCAGTAACTATAATTGTTGTTGCAGTTCCTGAGGTATTACCATTGGCAGCAACACTGAGTCTTGCTTTTGCTAGTTGCATTTGCACGGATGAAACAGGAACATTAACCACAAACCATATGGTAGTTACCAAGATATGGATAGTTAGAATCTCAGCTCAAATGATGCAATGTATCTTTGTGGTGTTGGCAACTTTTGTGGTTACAGTATGGGTTGGGGATAACATTGATTTTCCCTTCTCCATGCTGACATTTTTGGTGAAGCAGAATATTAATGGTCTAACAACCATCGTCAAATTTTGGCATACTTTTTCGGTTGACTATGGTTATGCCTTCGTGGTGATAGCTTTGCTGGTAATGATAAAAATAGTGGTGGAAAAAGTGCGTTGCAACGAGATCAATGATTGGTCTTCAAGAGATGCAAATAGATTTGTAGTCGATTATGCTCTTGCAATGTTAGAGTATTTACTCTTCCTTAAAATAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0008150 GO:0008324 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009624 GO:0009705 GO:0010941 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031224 GO:0031226 GO:0034220 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0042742 GO:0043067 GO:0043069 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046873 GO:0048519 GO:0048523 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055081 GO:0055085 GO:0060548 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098542 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

1072

Amino Acids

118.67

Weight (kDa)

5.83

Isoelectric Point (pI)

29.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CaATP_NAI	PF12515	5 - 50	1.1e-14	Ca2+-ATPase N terminal autoinhibitory domain
Cation_ATPase_N	PF00690	122 - 189	1.1e-11	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	245 - 340	3.1e-19	P-type ATPase actuator domain
CaATP_NAI	PF12515	504 - 547	6.2e-12	Ca2+-ATPase N terminal autoinhibitory domain
Cation_ATPase_N	PF00690	626 - 692	1.3e-10	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	747 - 842	6.3e-19	P-type ATPase actuator domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0021379)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr3g0483411
rosa_laevigata	RLG00000023282 RLG00000023285
rosa_multiflora	Rmu_sc0007793.1_g000006
rosa_roxburghii	Rroxscaffold_6G00398350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1045, 2551
AasI	GACNNNNNNGTC	2 cut(s)	29, 1520
AatII	GACGTC	1 cut(s)	33
Acc36I	ACCTGC	2 cut(s)	1045, 2551
AccB7I	CCANNNNNTGG	4 cut(s)	830, 1428, 2336, 2865
AccI	GTMKAC	1 cut(s)	436
AccII	CGCG	2 cut(s)	90, 1635
AciI	CCGC	3 cut(s)	88, 105, 1978
AcoI	YGGCCR	2 cut(s)	596, 2105
AcsI	RAATTY	5 cut(s)	183, 624, 1671, 2133, 3023
AcuI	CTGAAG	4 cut(s)	300, 609, 1275, 1809
AcyI	GRCGYC	1 cut(s)	30
AfaI	GTAC	2 cut(s)	556, 1917
AflIII	ACRYGT	1 cut(s)	1612
AhlI	ACTAGT	1 cut(s)	1756
AjnI	CCWGG	3 cut(s)	107, 174, 1665
AloI	GAACNNNNNNTCC	4 cut(s)	780, 812, 2286, 2318
Alw26I	GTCTC	3 cut(s)	1037, 1343, 2543
AlwNI	CAGNNNCTG	3 cut(s)	254, 1253, 2759
AoxI	GGCC	6 cut(s)	57, 285, 596, 1576, 1794, 2105
ApeKI	GCWGC	4 cut(s)	212, 1700, 1848, 2777
ApoI	RAATTY	5 cut(s)	183, 624, 1671, 2133, 3023
AseI	ATTAAT	2 cut(s)	1307, 3000
Asp700I	GAANNNNTTC	1 cut(s)	183
AspLEI	GCGC	2 cut(s)	1635, 1637
AspS9I	GGNCC	2 cut(s)	993, 2499
AsuII	TTCGAA	1 cut(s)	1518
AvaII	GGWCC	2 cut(s)	993, 2499
AxyI	CCTNAGG	1 cut(s)	2760
BaeI	ACNNNNGTAYC	2 cut(s)	1890, 1923
BalI	TGGCCA	2 cut(s)	598, 2107
BarI	GAAGNNNNNNTAC	2 cut(s)	3182, 3214
BbsI	GAAGAC	3 cut(s)	1176, 2682, 3129
BbvI	GCAGC	4 cut(s)	224, 1712, 1860, 2789
BceAI	ACGGC	3 cut(s)	65, 1556, 2116
BciT130I	CCWGG	3 cut(s)	109, 176, 1667
BciVI	GTATCC	1 cut(s)	1918
BclI	TGATCA	3 cut(s)	256, 633, 1765
BcoDI	GTCTC	3 cut(s)	1037, 1343, 2543
BcuI	ACTAGT	1 cut(s)	1756
BfaI	CTAG	6 cut(s)	741, 1365, 1706, 1757, 2247, 2802
BfmI	CTRYAG	5 cut(s)	521, 1052, 1446, 2030, 2558
BfuAI	ACCTGC	2 cut(s)	1045, 2551
BfuI	GTATCC	1 cut(s)	1918
BglII	AGATCT	1 cut(s)	2645
BisI	GCNGC	5 cut(s)	88, 213, 1701, 1849, 2778
BlpI	GCTNAGC	1 cut(s)	1629
BlsI	GCNGC	5 cut(s)	89, 214, 1702, 1850, 2779
Bme1390I	CCNGG	3 cut(s)	109, 176, 1667
Bme18I	GGWCC	2 cut(s)	993, 2499
BmgT120I	GGNCC	2 cut(s)	993, 2499
BmiI	GGNNCC	4 cut(s)	116, 940, 1607, 2446
BmrFI	CCNGG	3 cut(s)	109, 176, 1667
BmsI	GCATC	7 cut(s)	335, 1183, 1342, 1844, 2689, 2883, 3136
BpiI	GAAGAC	3 cut(s)	1176, 2682, 3129
BpmI	CTGGAG	1 cut(s)	1764
Bpu1102I	GCTNAGC	1 cut(s)	1629
Bpu14I	TTCGAA	1 cut(s)	1518
BpuEI	CTTGAG	2 cut(s)	46, 219
BsaHI	GRCGYC	1 cut(s)	30
BsaI	GGTCTC	2 cut(s)	1037, 2543
BsaJI	CCNNGG	6 cut(s)	147, 367, 558, 1509, 1638, 2067
BsaWI	WCCGGW	1 cut(s)	1593
BsaXI	ACNNNNNCTCC	6 cut(s)	780, 810, 1927, 1957, 2286, 2316
Bse1I	ACTGG	3 cut(s)	248, 899, 2405
Bse21I	CCTNAGG	1 cut(s)	2760
Bse3DI	GCAATG	8 cut(s)	1171, 1203, 1221, 1302, 2677, 2709, 2903, 3186
BseBI	CCWGG	3 cut(s)	109, 176, 1667
BseDI	CCNNGG	6 cut(s)	147, 367, 558, 1509, 1638, 2067
BseGI	GGATG	4 cut(s)	310, 751, 2257, 2824
BseMI	GCAATG	8 cut(s)	1171, 1203, 1221, 1302, 2677, 2709, 2903, 3186
BseNI	ACTGG	3 cut(s)	248, 899, 2405
BsePI	GCGCGC	1 cut(s)	1633
BseRI	GAGGAG	1 cut(s)	2553
BseXI	GCAGC	4 cut(s)	224, 1712, 1860, 2789
Bsh1236I	CGCG	2 cut(s)	90, 1635
BshFI	GGCC	6 cut(s)	59, 287, 598, 1578, 1796, 2107
BsiSI	CCGG	3 cut(s)	53, 1544, 1594
BslFI	GGGAC	2 cut(s)	591, 2100
BsmAI	GTCTC	3 cut(s)	1037, 1343, 2543
BsmFI	GGGAC	2 cut(s)	591, 2100
BsmI	GAATGC	2 cut(s)	306, 1815
BsnI	GGCC	6 cut(s)	59, 287, 598, 1578, 1796, 2107
Bso31I	GGTCTC	2 cut(s)	1037, 2543
Bsp119I	TTCGAA	1 cut(s)	1518
Bsp1720I	GCTNAGC	1 cut(s)	1629
Bsp19I	CCATGG	1 cut(s)	2067
BspACI	CCGC	3 cut(s)	88, 105, 1978
BspANI	GGCC	6 cut(s)	59, 287, 598, 1578, 1796, 2107
BspFNI	CGCG	2 cut(s)	90, 1635
BspLI	GGNNCC	4 cut(s)	116, 940, 1607, 2446
BspMAI	CTGCAG	2 cut(s)	1056, 2562
BspMI	ACCTGC	2 cut(s)	1045, 2551
BspT104I	TTCGAA	1 cut(s)	1518
BspTNI	GGTCTC	2 cut(s)	1037, 2543
BsrDI	GCAATG	8 cut(s)	1171, 1203, 1221, 1302, 2677, 2709, 2903, 3186
BsrI	ACTGG	3 cut(s)	248, 899, 2405
BssECI	CCNNGG	6 cut(s)	147, 367, 558, 1509, 1638, 2067
BssHII	GCGCGC	1 cut(s)	1633
BssNAI	GTATAC	1 cut(s)	437
BssNI	GRCGYC	1 cut(s)	30
BssT1I	CCWWGG	2 cut(s)	1509, 2067
Bst1107I	GTATAC	1 cut(s)	437
Bst2UI	CCWGG	3 cut(s)	109, 176, 1667
Bst6I	CTCTTC	3 cut(s)	276, 1785, 3203
BstACI	GRCGYC	1 cut(s)	30
BstAPI	GCANNNNNTGC	2 cut(s)	688, 2194
BstBI	TTCGAA	1 cut(s)	1518
BstC8I	GCNNGC	4 cut(s)	144, 1345, 1635, 2105
BstDSI	CCRYGG	3 cut(s)	367, 558, 2067
BstEII	GGTNACC	2 cut(s)	812, 2318
BstF5I	GGATG	4 cut(s)	310, 751, 2257, 2824
BstFNI	CGCG	2 cut(s)	90, 1635
BstHHI	GCGC	2 cut(s)	1635, 1637
BstMAI	GTCTC	3 cut(s)	1037, 1343, 2543
BstNI	CCWGG	3 cut(s)	109, 176, 1667
BstNSI	RCATGY	4 cut(s)	610, 859, 1616, 2119
BstPI	GGTNACC	2 cut(s)	812, 2318
BstSCI	CCNGG	3 cut(s)	107, 174, 1665
BstSFI	CTRYAG	5 cut(s)	521, 1052, 1446, 2030, 2558
BstUI	CGCG	2 cut(s)	90, 1635
BstV1I	GCAGC	4 cut(s)	224, 1712, 1860, 2789
BstV2I	GAAGAC	3 cut(s)	1176, 2682, 3129
BstX2I	RGATCY	1 cut(s)	2645
BstXI	CCANNNNNNTGG	1 cut(s)	350
BstYI	RGATCY	1 cut(s)	2645
BstZ17I	GTATAC	1 cut(s)	437
Bsu36I	CCTNAGG	1 cut(s)	2760
BsuI	GTATCC	1 cut(s)	1918
BsuRI	GGCC	6 cut(s)	59, 287, 598, 1578, 1796, 2107
BtgI	CCRYGG	3 cut(s)	367, 558, 2067
BtsCI	GGATG	4 cut(s)	310, 751, 2257, 2824
BtsI	GCAGTG	6 cut(s)	660, 813, 1049, 2166, 2319, 2555
BveI	ACCTGC	2 cut(s)	1045, 2551
Cac8I	GCNNGC	4 cut(s)	144, 1345, 1635, 2105
CaiI	CAGNNNCTG	3 cut(s)	254, 1253, 2759
CfoI	GCGC	2 cut(s)	1635, 1637
Cfr13I	GGNCC	2 cut(s)	993, 2499
CseI	GACGC	1 cut(s)	79
Csp6I	GTAC	2 cut(s)	555, 1916
CspCI	CAANNNNNGTGG	6 cut(s)	555, 590, 2064, 2099, 2907, 2942
CviQI	GTAC	2 cut(s)	555, 1916
DraI	TTTAAA	1 cut(s)	1732
DrdI	GACNNNNNNGTC	2 cut(s)	29, 1520
DseDI	GACNNNNNNGTC	2 cut(s)	29, 1520
EaeI	YGGCCR	2 cut(s)	596, 2105
Eam1104I	CTCTTC	3 cut(s)	276, 1785, 3203
EarI	CTCTTC	3 cut(s)	276, 1785, 3203
Eco130I	CCWWGG	2 cut(s)	1509, 2067
Eco147I	AGGCCT	1 cut(s)	59
Eco31I	GGTCTC	2 cut(s)	1037, 2543
Eco47I	GGWCC	2 cut(s)	993, 2499
Eco57I	CTGAAG	4 cut(s)	300, 609, 1275, 1809
Eco81I	CCTNAGG	1 cut(s)	2760
Eco91I	GGTNACC	2 cut(s)	812, 2318
EcoO65I	GGTNACC	2 cut(s)	812, 2318
EcoRII	CCWGG	3 cut(s)	107, 174, 1665
EcoT14I	CCWWGG	2 cut(s)	1509, 2067
ErhI	CCWWGG	2 cut(s)	1509, 2067
FaqI	GGGAC	2 cut(s)	591, 2100
FauI	CCCGC	1 cut(s)	112
FauNDI	CATATG	2 cut(s)	1410, 2847
FbaI	TGATCA	3 cut(s)	256, 633, 1765
FblI	GTMKAC	1 cut(s)	436
Fnu4HI	GCNGC	5 cut(s)	88, 213, 1701, 1849, 2778
FokI	GGATG	4 cut(s)	297, 758, 2264, 2831
Fsp4HI	GCNGC	5 cut(s)	88, 213, 1701, 1849, 2778
FspBI	CTAG	6 cut(s)	741, 1365, 1706, 1757, 2247, 2802
GlaI	GCGC	2 cut(s)	1634, 1636
GluI	GCNGC	5 cut(s)	88, 213, 1701, 1849, 2778
GsuI	CTGGAG	1 cut(s)	1764
HaeIII	GGCC	6 cut(s)	59, 287, 598, 1578, 1796, 2107
HapII	CCGG	3 cut(s)	53, 1544, 1594
HgaI	GACGC	1 cut(s)	79
HhaI	GCGC	2 cut(s)	1635, 1637
Hin1I	GRCGYC	1 cut(s)	30
Hin6I	GCGC	2 cut(s)	1633, 1635
HinP1I	GCGC	2 cut(s)	1633, 1635
HincII	GTYRAC	3 cut(s)	245, 1754, 3046
HindII	GTYRAC	3 cut(s)	245, 1754, 3046
HindIII	AAGCTT	3 cut(s)	874, 2051, 2380
HinfI	GANTC	7 cut(s)	241, 869, 1282, 1750, 2375, 2788, 2877
HpaII	CCGG	3 cut(s)	53, 1544, 1594
Hpy166II	GTNNAC	5 cut(s)	245, 437, 1693, 1754, 3046
Hpy8I	GTNNAC	5 cut(s)	245, 437, 1693, 1754, 3046
Hpy99I	CGWCG	3 cut(s)	32, 95, 1577
HpyAV	CCTTC	8 cut(s)	410, 584, 596, 1250, 1919, 2105, 2974, 3070
HpyCH4IV	ACGT	2 cut(s)	30, 1476
HpySE526I	ACGT	2 cut(s)	30, 1476
Hsp92I	GRCGYC	1 cut(s)	30
HspAI	GCGC	2 cut(s)	1633, 1635
Ksp22I	TGATCA	3 cut(s)	256, 633, 1765
LmnI	GCTCC	1 cut(s)	1687
Lsp1109I	GCAGC	4 cut(s)	224, 1712, 1860, 2789
LweI	GCATC	7 cut(s)	335, 1183, 1342, 1844, 2689, 2883, 3136
MaeI	CTAG	6 cut(s)	741, 1365, 1706, 1757, 2247, 2802
MaeII	ACGT	2 cut(s)	30, 1476
MfeI	CAATTG	4 cut(s)	67, 567, 1558, 2076
MflI	RGATCY	1 cut(s)	2645
MlsI	TGGCCA	2 cut(s)	598, 2107
MluNI	TGGCCA	2 cut(s)	598, 2107
MlyI	GAGTC	6 cut(s)	250, 878, 1291, 1759, 2384, 2797
MmeI	TCCRAC	2 cut(s)	142, 1633
Mox20I	TGGCCA	2 cut(s)	598, 2107
MroXI	GAANNNNTTC	1 cut(s)	183
MscI	TGGCCA	2 cut(s)	598, 2107
MslI	CAYNNNNRTG	3 cut(s)	315, 342, 1824
Msp20I	TGGCCA	2 cut(s)	598, 2107
MspI	CCGG	3 cut(s)	53, 1544, 1594
MspR9I	CCNGG	3 cut(s)	109, 176, 1667
MunI	CAATTG	4 cut(s)	67, 567, 1558, 2076
Mva1269I	GAATGC	2 cut(s)	306, 1815
MvaI	CCWGG	3 cut(s)	109, 176, 1667
MvnI	CGCG	2 cut(s)	90, 1635
NcoI	CCATGG	1 cut(s)	2067
NdeI	CATATG	2 cut(s)	1410, 2847
NlaIV	GGNNCC	4 cut(s)	116, 940, 1607, 2446
NmeAIII	GCCGAG	2 cut(s)	172, 1663
NmuCI	GTSAC	7 cut(s)	658, 812, 1114, 2164, 2242, 2318, 2620
NspI	RCATGY	4 cut(s)	610, 859, 1616, 2119
NspV	TTCGAA	1 cut(s)	1518
PaqCI	CACCTGC	2 cut(s)	1045, 2551
PauI	GCGCGC	1 cut(s)	1633
PceI	AGGCCT	1 cut(s)	59
PciI	ACATGT	1 cut(s)	1612
PcsI	WCGNNNNNNNCGW	1 cut(s)	1581
PctI	GAATGC	2 cut(s)	306, 1815
PdmI	GAANNNNTTC	1 cut(s)	183
PfeI	GAWTC	1 cut(s)	2877
PflMI	CCANNNNNTGG	4 cut(s)	830, 1428, 2336, 2865
PfoI	TCCNGGA	2 cut(s)	174, 1665
PkrI	GCNGC	5 cut(s)	89, 214, 1702, 1850, 2779
PleI	GAGTC	6 cut(s)	249, 877, 1290, 1758, 2383, 2796
PpsI	GAGTC	6 cut(s)	249, 877, 1290, 1758, 2383, 2796
PscI	ACATGT	1 cut(s)	1612
PshBI	ATTAAT	2 cut(s)	1307, 3000
Psp6I	CCWGG	3 cut(s)	107, 174, 1665
PspEI	GGTNACC	2 cut(s)	812, 2318
PspGI	CCWGG	3 cut(s)	107, 174, 1665
PspN4I	GGNNCC	4 cut(s)	116, 940, 1607, 2446
PspPI	GGNCC	2 cut(s)	993, 2499
PstI	CTGCAG	2 cut(s)	1056, 2562
PstNI	CAGNNNCTG	3 cut(s)	254, 1253, 2759
PsuI	RGATCY	1 cut(s)	2645
PteI	GCGCGC	1 cut(s)	1633
RsaI	GTAC	2 cut(s)	556, 1917
RsaNI	GTAC	2 cut(s)	555, 1916
RseI	CAYNNNNRTG	3 cut(s)	315, 342, 1824
SatI	GCNGC	5 cut(s)	88, 213, 1701, 1849, 2778
Sau96I	GGNCC	2 cut(s)	993, 2499
SchI	GAGTC	6 cut(s)	250, 878, 1291, 1759, 2384, 2797
ScrFI	CCNGG	3 cut(s)	109, 176, 1667
SfaNI	GCATC	7 cut(s)	335, 1183, 1342, 1844, 2689, 2883, 3136
SfcI	CTRYAG	5 cut(s)	521, 1052, 1446, 2030, 2558
SfuI	TTCGAA	1 cut(s)	1518
SinI	GGWCC	2 cut(s)	993, 2499
SmiMI	CAYNNNNRTG	3 cut(s)	315, 342, 1824
SmlI	CTYRAG	2 cut(s)	61, 234
SmoI	CTYRAG	2 cut(s)	61, 234
SpeI	ACTAGT	1 cut(s)	1756
SseBI	AGGCCT	1 cut(s)	59
SsiI	CCGC	3 cut(s)	88, 105, 1978
SspI	AATATT	1 cut(s)	2998
SspMI	CTAG	6 cut(s)	741, 1365, 1706, 1757, 2247, 2802
StuI	AGGCCT	1 cut(s)	59
StyD4I	CCNGG	3 cut(s)	107, 174, 1665
StyI	CCWWGG	2 cut(s)	1509, 2067
TaiI	ACGT	2 cut(s)	33, 1479
TaqI	TCGA	5 cut(s)	27, 187, 1518, 1675, 3165
TaqII	GACCGA	2 cut(s)	1010, 2516
TauI	GCSGC	1 cut(s)	90
TfiI	GAWTC	1 cut(s)	2877
TseFI	GTSAC	7 cut(s)	658, 812, 1114, 2164, 2242, 2318, 2620
TseI	GCWGC	4 cut(s)	212, 1700, 1848, 2777
Tsp45I	GTSAC	7 cut(s)	658, 812, 1114, 2164, 2242, 2318, 2620
TspGWI	ACGGA	6 cut(s)	391, 491, 1394, 1900, 2000, 2831
Van91I	CCANNNNNTGG	4 cut(s)	830, 1428, 2336, 2865
VpaK11BI	GGWCC	2 cut(s)	993, 2499
VspI	ATTAAT	2 cut(s)	1307, 3000
XapI	RAATTY	5 cut(s)	183, 624, 1671, 2133, 3023
XceI	RCATGY	4 cut(s)	610, 859, 1616, 2119
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1408, 2845
XmiI	GTMKAC	1 cut(s)	436
XmnI	GAANNNNTTC	1 cut(s)	183
XspI	CTAG	6 cut(s)	741, 1365, 1706, 1757, 2247, 2802
ZraI	GACGTC	1 cut(s)	31

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.