Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0017333

Physical Location & Seq

Genomic Coordinates Forward (+)

29240361 .. 29248212

Gene Structure 7852 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023858

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGTCTAAGAAAGGGAAAAAAAGTCCTATGTCTGCAAATGAGTTGAGGAAGAAGGCCAAAGAAAGGGCTGAGTATCAAAGGAAAAAGTTTGCTGCTGCCAAGGCAGCAAACAATGACAGACAGAACCACCGAACCGCCGGACGCGTTTCCATTCCACCACCACCACCACCACCACCACCACCGGGAAGGGGGAGGGGCGTTCAGATGTCTTTGTTTATTGGCAATCTATCAGCTCGCACCCGCGGAGATGATCTTCAGCGTGTCTTTAGGAAGTTTGGACAATGTACATTAAATCTGAAAGATCGCTATGGGTTTGTAGTATATGATTTCCCGCAAGATGCTGAGAATGCTTTAAGAGCACTACAGGGAAGGAATATCTGTGGGGAGCCTTTAATACTAACATGGTCAAAAAAGCAGCCTATACCCTTCCAGGGACATCAAAGGGTTGTTAGATCCTACGCGTTACATGGGAGGCATTCTGCCAGGAGGAGAGATTTTGCTAGTAGAAGAATGAGTTCAAATGACTGGAGAGATTACAGATCGGATATAAATCAACCAGATACTGATGGTGAAAAGCTGAGTTCTGTGTATATGCTCAATGGAGGCAGTGGTGACCCTAACAAATATGCTAATGATGATAGTAGAGAACATTATGATTTGACGGAAGGTCTGCCGGTTGATGGTGTTGCCAAACTGGTGGACACTGCCGATCAGATTGATAATGAGGTGGAATTTGACAGATATGAACCTTGCCAAAGTCATGAAGGGGAAGATGAACATGAAAACTGTCAGATGGCATATTCTGGTTGTGGTTCTGTTCCACAAAGACCTCAAGAGAATGCAAGGACAGTGAAGATCAGTGACACTACTTTGAACCGTTTTAATGATTTAAAGTCGCAGAATGGTTGCTTCAGCTGTGGGGATTTGGGACACAAGATCCGTGACTGTCCCAGAAAATACTCATCTGGAAGAAGCCCTAAAAGGTTTGACCATAGGCAGCATGATGCCATTGGTAAAATTAGTAGTGGTGAAGCTGAACTAGAAAGATTTGGATCCATCTCATTGGAGAAGCTGCGGTTGAATAAGGATAGTGCTTCTGGGCACAGGAAGAGTATGAGGGCAAGTGATTCAGGAAAGAGTAAGGCAACTGACAGGACCCAAATGAAGGATCGTGGAGGAAAGAAGAGAAGTAGATGGGAAGGCGAATCTCCAAAAAGCCATAGTCCTAAGAAAGCAAGGTCAGTTTTATCACCACCTCATTCTGATTACCCTGCATCCAAGTCTTGTGCAGCTTCTCAATCATCAGAGTCTGTGTCAAGGTGTACTAGTTCCAGAGCTAGGTCACAATCAGTATTTATGAGGGCACAGTCTTTGTCATCTGACTCAAGATCCAGCTCAAAATTGATAAGGTCCAGGTCTAGGTCAAGGTCAAGCTCCTTTACTTCGTCGTCTGAATCACTAAGCCGATCATCATATAAGGCACATGTAGATCTTAAATGCCCTGCGTATAAAACTAAAACTCCCAAATCCAAGGAGATTCTGCTTGAAAAGAGACAGCCAATAGGAGGTGATGCCCAGAGGGTTCAAAATCCAGGTTCTGATGCTGCTTGGTGTTCGTCTGCACAGGGTTCAAAAGAGAAGGTTGATCCAGAAAATTCTGGTGGACTGGTTGTGGGGGAAACTCATTTGAAGAAGCCAGCTTCAGAAATGCACGTCAATTATTGCAATGGCAATTCAACGTGCATATCCTCAGACGAAATGTGCATGGTTTTGAAGCACTATGGCATGGAACTTCCAGAACAAGGTGAAAGGCACTTACCGATAGAGGAGTATTTTGGTTCTGCTCGCCTTTGGCCATGGGAGATCATCTATTACAGGAGGCTGAAAAAAGGCCTCGTTTCGGTTGAGAACTATGCCAGGCGAGTTTCTCAGAACCAAGAGTTTGGCATCATTGATAAGTACGTCCGAAGTAGTAGTGGATGGGGAGAAATAGATGAGGAACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001655 GO:0001822 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006417 GO:0006928 GO:0006950 GO:0007275 GO:0007369 GO:0007399 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009653 GO:0009790 GO:0009792 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0016477 GO:0019219 GO:0019222 GO:0019899 GO:0022008 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031330 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0034248 GO:0034250 GO:0040011 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0043489 GO:0044424 GO:0044464 GO:0045727 GO:0045934 GO:0048255 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048598 GO:0048731 GO:0048793 GO:0048856 GO:0048869 GO:0048870 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0051674 GO:0060211 GO:0060212 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0072001 GO:0080090 GO:0097159 GO:1900151 GO:1900152 GO:1901363 GO:1902369 GO:1902373 GO:1903311 GO:1903312 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03040 ko05168 map03040 map05168

Pfam Domains

Protein Families

RRM_1 zf-CCHC

Protein Analysis

669

Amino Acids

74.91

Weight (kDa)

9.53

Isoelectric Point (pI)

63.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	71 - 130	4.8e-09	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017333)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g19810 FvH4_6g19810 FvH4_6g19810
malus_domestica	MD12G1033800.v1.1
pyrus_communis	pycom12g03140
rosa_chinensis	RchiOBHm_Chr3g0475181
rosa_laevigata	RLG00000023858
rosa_roxburghii	Rroxscaffold_6G00406470
rosa_rugosa	Rorug03G0147200
rosa_samantha	Rh3AG197100 Rh3BG227400 Rh3DG222600
rosa_wichuraiana	Rw3G017930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	3 cut(s)	144, 243, 461
AciI	CCGC	5 cut(s)	135, 241, 243, 332, 1075
AclWI	GGATC	7 cut(s)	447, 931, 1047, 1060, 1176, 1383, 1640
AcoI	YGGCCR	1 cut(s)	1853
AcsI	RAATTY	2 cut(s)	731, 1654
AcuI	CTGAAG	3 cut(s)	239, 895, 1686
AfaI	GTAC	3 cut(s)	286, 1324, 1961
AflIII	ACRYGT	3 cut(s)	142, 459, 1483
AgsI	TTSAA	9 cut(s)	519, 874, 1081, 1547, 1586, 1632, 1690, 1737, 1774
AhdI	GACNNNNNGTC	1 cut(s)	666
AhlI	ACTAGT	1 cut(s)	1325
AjiI	CACGTC	1 cut(s)	1714
AjnI	CCWGG	5 cut(s)	429, 482, 1412, 1591, 1916
Alw21I	GWGCWC	1 cut(s)	361
Alw26I	GTCTC	1 cut(s)	1546
AlwI	GGATC	7 cut(s)	447, 931, 1047, 1060, 1176, 1383, 1640
AlwNI	CAGNNNCTG	3 cut(s)	563, 1310, 1598
AoxI	GGCC	3 cut(s)	54, 1853, 1891
ApeKI	GCWGC	8 cut(s)	92, 95, 104, 415, 997, 1072, 1289, 1604
ApoI	RAATTY	2 cut(s)	731, 1654
Asp700I	GAANNNNTTC	1 cut(s)	514
AspS9I	GGNCC	2 cut(s)	1155, 1410
AsuC2I	CCSGG	1 cut(s)	183
AsuHPI	GGTGA	6 cut(s)	581, 623, 1040, 1242, 1580, 1817
AvaII	GGWCC	2 cut(s)	1155, 1410
BaeGI	GKGCMC	2 cut(s)	1104, 1366
BalI	TGGCCA	1 cut(s)	1855
BamHI	GGATCC	1 cut(s)	1052
Bbv12I	GWGCWC	1 cut(s)	361
BbvI	GCAGC	8 cut(s)	79, 82, 116, 427, 1009, 1059, 1301, 1591
BccI	CCATC	6 cut(s)	560, 674, 787, 1064, 1188, 1974
BciT130I	CCWGG	5 cut(s)	431, 484, 1414, 1593, 1918
BcnI	CCSGG	1 cut(s)	183
BcoDI	GTCTC	1 cut(s)	1546
BcuI	ACTAGT	1 cut(s)	1325
BfaI	CTAG	5 cut(s)	501, 1040, 1326, 1338, 1419
BfmI	CTRYAG	1 cut(s)	362
BglII	AGATCT	1 cut(s)	1489
BisI	GCNGC	8 cut(s)	93, 96, 105, 416, 998, 1073, 1290, 1605
BlsI	GCNGC	8 cut(s)	94, 97, 106, 417, 999, 1074, 1291, 1606
Bme1390I	CCNGG	6 cut(s)	183, 431, 484, 1414, 1593, 1918
Bme18I	GGWCC	2 cut(s)	1155, 1410
BmeRI	GACNNNNNGTC	1 cut(s)	666
BmgBI	CACGTC	1 cut(s)	1714
BmgT120I	GGNCC	2 cut(s)	1155, 1410
BmiI	GGNNCC	4 cut(s)	387, 1054, 1157, 2001
BmrFI	CCNGG	6 cut(s)	183, 431, 484, 1414, 1593, 1918
BmsI	GCATC	6 cut(s)	328, 994, 1283, 1561, 1591, 1956
BpmI	CTGGAG	1 cut(s)	547
BpuEI	CTTGAG	2 cut(s)	816, 1369
BpuMI	CCSGG	1 cut(s)	183
BsaBI	GATNNNNATC	2 cut(s)	549, 1051
BsaJI	CCNNGG	5 cut(s)	99, 241, 430, 1530, 1856
BsaXI	ACNNNNNCTCC	2 cut(s)	1504, 1534
Bse118I	RCCGGY	1 cut(s)	673
Bse1I	ACTGG	3 cut(s)	530, 699, 1671
Bse3DI	GCAATG	1 cut(s)	1732
Bse8I	GATNNNNATC	2 cut(s)	549, 1051
BseBI	CCWGG	5 cut(s)	431, 484, 1414, 1593, 1918
BseDI	CCNNGG	5 cut(s)	99, 241, 430, 1530, 1856
BseGI	GGATG	2 cut(s)	1274, 1985
BseJI	GATNNNNATC	2 cut(s)	549, 1051
BseMI	GCAATG	1 cut(s)	1732
BseMII	CTCAG	5 cut(s)	60, 333, 569, 1764, 1943
BseNI	ACTGG	3 cut(s)	530, 699, 1671
BseRI	GAGGAG	2 cut(s)	502, 1841
BseSI	GKGCMC	2 cut(s)	1104, 1366
BseXI	GCAGC	8 cut(s)	79, 82, 116, 427, 1009, 1059, 1301, 1591
BsgI	GTGCAG	2 cut(s)	1308, 1605
Bsh1236I	CGCG	3 cut(s)	144, 243, 461
BshFI	GGCC	3 cut(s)	56, 1855, 1893
BsiHKAI	GWGCWC	1 cut(s)	361
BsiSI	CCGG	3 cut(s)	138, 182, 674
BslFI	GGGAC	3 cut(s)	447, 933, 942
BsmAI	GTCTC	1 cut(s)	1546
BsmFI	GGGAC	3 cut(s)	447, 933, 942
BsmI	GAATGC	3 cut(s)	352, 475, 844
BsnI	GGCC	3 cut(s)	56, 1855, 1893
Bsp1286I	GDGCHC	3 cut(s)	361, 1104, 1366
Bsp1407I	TGTACA	1 cut(s)	284
Bsp19I	CCATGG	1 cut(s)	1856
BspACI	CCGC	5 cut(s)	135, 241, 243, 332, 1075
BspANI	GGCC	3 cut(s)	56, 1855, 1893
BspCNI	CTCAG	5 cut(s)	61, 334, 570, 1763, 1942
BspFNI	CGCG	3 cut(s)	144, 243, 461
BspHI	TCATGA	1 cut(s)	760
BspLI	GGNNCC	4 cut(s)	387, 1054, 1157, 2001
BspPI	GGATC	7 cut(s)	447, 931, 1047, 1060, 1176, 1383, 1640
BsrDI	GCAATG	1 cut(s)	1732
BsrFI	RCCGGY	1 cut(s)	673
BsrGI	TGTACA	1 cut(s)	284
BsrI	ACTGG	3 cut(s)	530, 699, 1671
BssAI	RCCGGY	1 cut(s)	673
BssECI	CCNNGG	5 cut(s)	99, 241, 430, 1530, 1856
BssT1I	CCWWGG	3 cut(s)	99, 1530, 1856
Bst2UI	CCWGG	5 cut(s)	431, 484, 1414, 1593, 1918
Bst4CI	ACNGT	5 cut(s)	788, 850, 878, 947, 1368
Bst6I	CTCTTC	2 cut(s)	1103, 1178
BstAUI	TGTACA	1 cut(s)	284
BstC8I	GCNNGC	3 cut(s)	235, 1698, 1846
BstDEI	CTNAG	8 cut(s)	6, 69, 342, 578, 1227, 1460, 1750, 1929
BstDSI	CCRYGG	2 cut(s)	241, 1856
BstEII	GGTNACC	1 cut(s)	611
BstF5I	GGATG	2 cut(s)	1274, 1985
BstFNI	CGCG	3 cut(s)	144, 243, 461
BstMAI	GTCTC	1 cut(s)	1546
BstMWI	GCNNNNNNNGC	4 cut(s)	101, 104, 347, 356
BstNI	CCWGG	5 cut(s)	431, 484, 1414, 1593, 1918
BstNSI	RCATGY	1 cut(s)	1487
BstPI	GGTNACC	1 cut(s)	611
BstSCI	CCNGG	6 cut(s)	181, 429, 482, 1412, 1591, 1916
BstSFI	CTRYAG	1 cut(s)	362
BstSLI	GKGCMC	2 cut(s)	1104, 1366
BstUI	CGCG	3 cut(s)	144, 243, 461
BstV1I	GCAGC	8 cut(s)	79, 82, 116, 427, 1009, 1059, 1301, 1591
BstX2I	RGATCY	5 cut(s)	452, 936, 1052, 1388, 1489
BstXI	CCANNNNNNTGG	3 cut(s)	697, 1063, 1943
BstYI	RGATCY	5 cut(s)	452, 936, 1052, 1388, 1489
BsuRI	GGCC	3 cut(s)	56, 1855, 1893
BtgI	CCRYGG	2 cut(s)	241, 1856
BtrI	CACGTC	1 cut(s)	1714
BtsCI	GGATG	2 cut(s)	1274, 1985
BtsI	GCAGTG	2 cut(s)	613, 702
BtsIMutI	CAGTG	4 cut(s)	613, 702, 855, 865
Cac8I	GCNNGC	3 cut(s)	235, 1698, 1846
CaiI	CAGNNNCTG	3 cut(s)	563, 1310, 1598
CciI	TCATGA	1 cut(s)	760
Cfr10I	RCCGGY	1 cut(s)	673
Cfr13I	GGNCC	2 cut(s)	1155, 1410
Cfr42I	CCGCGG	1 cut(s)	244
CseI	GACGC	1 cut(s)	150
Csp6I	GTAC	3 cut(s)	285, 1323, 1960
CviAII	CATG	9 cut(s)	402, 467, 761, 779, 1001, 1484, 1765, 1786, 1857
CviQI	GTAC	3 cut(s)	285, 1323, 1960
DdeI	CTNAG	8 cut(s)	6, 69, 342, 578, 1227, 1460, 1750, 1929
DraI	TTTAAA	1 cut(s)	891
DriI	GACNNNNNGTC	1 cut(s)	666
EaeI	YGGCCR	1 cut(s)	1853
Eam1104I	CTCTTC	2 cut(s)	1103, 1178
Eam1105I	GACNNNNNGTC	1 cut(s)	666
EarI	CTCTTC	2 cut(s)	1103, 1178
Eco130I	CCWWGG	3 cut(s)	99, 1530, 1856
Eco147I	AGGCCT	1 cut(s)	1893
Eco47I	GGWCC	2 cut(s)	1155, 1410
Eco57I	CTGAAG	3 cut(s)	239, 895, 1686
Eco91I	GGTNACC	1 cut(s)	611
EcoO109I	RGGNCCY	1 cut(s)	1155
EcoO65I	GGTNACC	1 cut(s)	611
EcoRII	CCWGG	5 cut(s)	429, 482, 1412, 1591, 1916
EcoT14I	CCWWGG	3 cut(s)	99, 1530, 1856
ErhI	CCWWGG	3 cut(s)	99, 1530, 1856
FaeI	CATG	9 cut(s)	405, 470, 764, 782, 1004, 1487, 1768, 1789, 1860
FaqI	GGGAC	3 cut(s)	447, 933, 942
FatI	CATG	9 cut(s)	401, 466, 760, 778, 1000, 1483, 1764, 1785, 1856
FauI	CCCGC	2 cut(s)	248, 339
Fnu4HI	GCNGC	8 cut(s)	93, 96, 105, 416, 998, 1073, 1290, 1605
FokI	GGATG	2 cut(s)	1261, 1992
Fsp4HI	GCNGC	8 cut(s)	93, 96, 105, 416, 998, 1073, 1290, 1605
FspBI	CTAG	5 cut(s)	501, 1040, 1326, 1338, 1419
GluI	GCNGC	8 cut(s)	93, 96, 105, 416, 998, 1073, 1290, 1605
GsuI	CTGGAG	1 cut(s)	547
HaeIII	GGCC	3 cut(s)	56, 1855, 1893
HapII	CCGG	3 cut(s)	138, 182, 674
HgaI	GACGC	1 cut(s)	150
Hin1II	CATG	9 cut(s)	405, 470, 764, 782, 1004, 1487, 1768, 1789, 1860
HinfI	GANTC	6 cut(s)	1127, 1205, 1307, 1382, 1454, 1537
HpaII	CCGG	3 cut(s)	138, 182, 674
HphI	GGTGA	6 cut(s)	581, 623, 1040, 1242, 1580, 1817
Hpy166II	GTNNAC	3 cut(s)	700, 1323, 1664
Hpy188III	TCNNGA	8 cut(s)	761, 833, 966, 1131, 1332, 1386, 1649, 1796
Hpy8I	GTNNAC	3 cut(s)	700, 1323, 1664
Hpy99I	CGWCG	1 cut(s)	1450
HpyAV	CCTTC	9 cut(s)	46, 180, 363, 436, 659, 758, 1159, 1193, 1633
HpyCH4III	ACNGT	5 cut(s)	788, 850, 878, 947, 1368
HpyCH4IV	ACGT	3 cut(s)	1713, 1739, 1962
HpyCH4V	TGCA	9 cut(s)	35, 842, 1274, 1289, 1622, 1711, 1725, 1743, 1764
HpyF10VI	GCNNNNNNNGC	4 cut(s)	101, 104, 347, 356
HpyF3I	CTNAG	8 cut(s)	6, 69, 342, 578, 1227, 1460, 1750, 1929
HpySE526I	ACGT	3 cut(s)	1713, 1739, 1962
Hsp92II	CATG	9 cut(s)	405, 470, 764, 782, 1004, 1487, 1768, 1789, 1860
KspI	CCGCGG	1 cut(s)	244
LmnI	GCTCC	2 cut(s)	385, 1439
Lsp1109I	GCAGC	8 cut(s)	79, 82, 116, 427, 1009, 1059, 1301, 1591
LweI	GCATC	6 cut(s)	328, 994, 1283, 1561, 1591, 1956
MaeI	CTAG	5 cut(s)	501, 1040, 1326, 1338, 1419
MaeII	ACGT	3 cut(s)	1713, 1739, 1962
MaeIII	GTNAC	5 cut(s)	462, 611, 860, 941, 1341
MboII	GAAGA	9 cut(s)	61, 245, 519, 782, 865, 981, 1120, 1195, 1702
MflI	RGATCY	5 cut(s)	452, 936, 1052, 1388, 1489
MhlI	GDGCHC	3 cut(s)	361, 1104, 1366
MlsI	TGGCCA	1 cut(s)	1855
MluCI	AATT	6 cut(s)	731, 1017, 1400, 1654, 1717, 1732
MluI	ACGCGT	2 cut(s)	142, 459
MluNI	TGGCCA	1 cut(s)	1855
MlyI	GAGTC	2 cut(s)	1316, 1376
Mox20I	TGGCCA	1 cut(s)	1855
MroXI	GAANNNNTTC	1 cut(s)	514
MscI	TGGCCA	1 cut(s)	1855
MseI	TTAA	6 cut(s)	290, 353, 392, 882, 890, 1494
Msp20I	TGGCCA	1 cut(s)	1855
MspA1I	CMGCKG	2 cut(s)	243, 915
MspI	CCGG	3 cut(s)	138, 182, 674
MspR9I	CCNGG	6 cut(s)	183, 431, 484, 1414, 1593, 1918
Mva1269I	GAATGC	3 cut(s)	352, 475, 844
MvaI	CCWGG	5 cut(s)	431, 484, 1414, 1593, 1918
MvnI	CGCG	3 cut(s)	144, 243, 461
MwoI	GCNNNNNNNGC	4 cut(s)	101, 104, 347, 356
NciI	CCSGG	1 cut(s)	183
NcoI	CCATGG	1 cut(s)	1856
NlaIII	CATG	9 cut(s)	405, 470, 764, 782, 1004, 1487, 1768, 1789, 1860
NlaIV	GGNNCC	4 cut(s)	387, 1054, 1157, 2001
NmuCI	GTSAC	4 cut(s)	611, 860, 941, 1341
NspI	RCATGY	1 cut(s)	1487
PagI	TCATGA	1 cut(s)	760
PceI	AGGCCT	1 cut(s)	1893
PciI	ACATGT	1 cut(s)	1483
PctI	GAATGC	3 cut(s)	352, 475, 844
PdmI	GAANNNNTTC	1 cut(s)	514
PfeI	GAWTC	4 cut(s)	1127, 1205, 1454, 1537
PkrI	GCNGC	8 cut(s)	94, 97, 106, 417, 999, 1074, 1291, 1606
PleI	GAGTC	2 cut(s)	1315, 1376
PpsI	GAGTC	2 cut(s)	1315, 1376
PpuMI	RGGWCCY	1 cut(s)	1155
PscI	ACATGT	1 cut(s)	1483
Psp5II	RGGWCCY	1 cut(s)	1155
Psp6I	CCWGG	5 cut(s)	429, 482, 1412, 1591, 1916
PspEI	GGTNACC	1 cut(s)	611
PspGI	CCWGG	5 cut(s)	429, 482, 1412, 1591, 1916
PspN4I	GGNNCC	4 cut(s)	387, 1054, 1157, 2001
PspPI	GGNCC	2 cut(s)	1155, 1410
PspPPI	RGGWCCY	1 cut(s)	1155
PstNI	CAGNNNCTG	3 cut(s)	563, 1310, 1598
PsuI	RGATCY	5 cut(s)	452, 936, 1052, 1388, 1489
PvuII	CAGCTG	1 cut(s)	915
RsaI	GTAC	3 cut(s)	286, 1324, 1961
RsaNI	GTAC	3 cut(s)	285, 1323, 1960
SacII	CCGCGG	1 cut(s)	244
SaqAI	TTAA	6 cut(s)	290, 353, 392, 882, 890, 1494
SatI	GCNGC	8 cut(s)	93, 96, 105, 416, 998, 1073, 1290, 1605
Sau96I	GGNCC	2 cut(s)	1155, 1410
SchI	GAGTC	2 cut(s)	1316, 1376
ScrFI	CCNGG	6 cut(s)	183, 431, 484, 1414, 1593, 1918
SduI	GDGCHC	3 cut(s)	361, 1104, 1366
SfaNI	GCATC	6 cut(s)	328, 994, 1283, 1561, 1591, 1956
SfcI	CTRYAG	1 cut(s)	362
Sfr303I	CCGCGG	1 cut(s)	244
SgrBI	CCGCGG	1 cut(s)	244
SinI	GGWCC	2 cut(s)	1155, 1410
SmlI	CTYRAG	2 cut(s)	831, 1384
SmoI	CTYRAG	2 cut(s)	831, 1384
SpeI	ACTAGT	1 cut(s)	1325
Sse9I	AATT	6 cut(s)	731, 1017, 1400, 1654, 1717, 1732
SseBI	AGGCCT	1 cut(s)	1893
SsiI	CCGC	5 cut(s)	135, 241, 243, 332, 1075
SspMI	CTAG	5 cut(s)	501, 1040, 1326, 1338, 1419
StuI	AGGCCT	1 cut(s)	1893
StyD4I	CCNGG	6 cut(s)	181, 429, 482, 1412, 1591, 1916
StyI	CCWWGG	3 cut(s)	99, 1530, 1856
TaaI	ACNGT	5 cut(s)	788, 850, 878, 947, 1368
TaiI	ACGT	3 cut(s)	1716, 1742, 1965
TasI	AATT	6 cut(s)	731, 1017, 1400, 1654, 1717, 1732
TatI	WGTACW	2 cut(s)	284, 1322
TfiI	GAWTC	4 cut(s)	1127, 1205, 1454, 1537
Tru1I	TTAA	6 cut(s)	290, 353, 392, 882, 890, 1494
Tru9I	TTAA	6 cut(s)	290, 353, 392, 882, 890, 1494
TscAI	CASTG	4 cut(s)	613, 709, 855, 865
TseFI	GTSAC	4 cut(s)	611, 860, 941, 1341
TseI	GCWGC	8 cut(s)	92, 95, 104, 415, 997, 1072, 1289, 1604
Tsp45I	GTSAC	4 cut(s)	611, 860, 941, 1341
TspDTI	ATGAA	5 cut(s)	759, 777, 789, 795, 1178
TspGWI	ACGGA	2 cut(s)	677, 929
TspRI	CASTG	4 cut(s)	613, 709, 855, 865
VpaK11BI	GGWCC	2 cut(s)	1155, 1410
XapI	RAATTY	2 cut(s)	731, 1654
XceI	RCATGY	1 cut(s)	1487
XmnI	GAANNNNTTC	1 cut(s)	514
XspI	CTAG	5 cut(s)	501, 1040, 1326, 1338, 1419

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.