RLG00000029028

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
31702473 .. 31703499
1027 bp
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UTR
Exon/CDS
Intron
RLM00000029028

Sequence Viewer

Length: 408 bp
ATGAAATGTGGAAATGCTAAGACTCCAACTCCACTGCCACCCTCAAGCATAGATGGAGTTGAATTTGATTGGAAATTTGCATTTGTGGGATTTGGAAGTGGGTTGTTTGTGGGAGTGGTACTTGTGAACATCACCATCACTCAGAAGCGTGAGTTGTTTCTTGAGATAGTTGGAATGTTGATGAGGCTAATCAAAAGGATCAAAAGGGAGAGAGGTCCACAAACCTCCTCTTCTGAATATGCTACACCTCCTTCTGGAATTAATTATGATGTGTTCTTGAGTTTCAGAGGCATGGACACTCGCAAGACTTTTACAGATCACCTCTATACAGCCCTTGCAACGCTGGACTCCGTACTTCGGGAGATGACCCTGAACTTGAGAAGGGAGAAAGTTTCAAGGAAAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

136

Amino Acids

15.26

Weight (kDa)

9.86

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021586)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 206
AcsI RAATTY 2 cut(s) 62, 74
AfaI GTAC 2 cut(s) 120, 354
AfiI CCNNNNNNNGG 2 cut(s) 254, 357
AgsI TTSAA 2 cut(s) 62, 396
AlwI GGATC 1 cut(s) 206
ApoI RAATTY 2 cut(s) 62, 74
AseI ATTAAT 1 cut(s) 261
AspS9I GGNCC 1 cut(s) 215
AsuHPI GGTGA 2 cut(s) 124, 311
AvaII GGWCC 1 cut(s) 215
BccI CCATC 2 cut(s) 47, 143
BfaI CTAG 1 cut(s) 406
Bme18I GGWCC 1 cut(s) 215
BmgT120I GGNCC 1 cut(s) 215
BpuEI CTTGAG 4 cut(s) 28, 182, 298, 397
BsaXI ACNNNNNCTCC 2 cut(s) 13, 43
Bsc4I CCNNNNNNNGG 2 cut(s) 254, 357
BseLI CCNNNNNNNGG 2 cut(s) 254, 357
BseMII CTCAG 1 cut(s) 155
BseRI GAGGAG 1 cut(s) 217
BslI CCNNNNNNNGG 2 cut(s) 254, 357
Bsp143I GATC 2 cut(s) 198, 316
BspCNI CTCAG 1 cut(s) 154
BspPI GGATC 1 cut(s) 206
BssMI GATC 2 cut(s) 198, 316
Bst6I CTCTTC 1 cut(s) 235
BstDEI CTNAG 2 cut(s) 18, 141
BstKTI GATC 2 cut(s) 201, 319
BstMBI GATC 2 cut(s) 198, 316
BtsI GCAGTG 1 cut(s) 32
BtsIMutI CAGTG 1 cut(s) 32
Cfr13I GGNCC 1 cut(s) 215
Csp6I GTAC 2 cut(s) 119, 353
CviAII CATG 1 cut(s) 292
CviJI RGCY 2 cut(s) 187, 332
CviKI_1 RGCY 2 cut(s) 187, 332
CviQI GTAC 2 cut(s) 119, 353
DdeI CTNAG 2 cut(s) 18, 141
DpnI GATC 2 cut(s) 200, 318
DpnII GATC 2 cut(s) 198, 316
Eam1104I CTCTTC 1 cut(s) 235
EarI CTCTTC 1 cut(s) 235
Eco47I GGWCC 1 cut(s) 215
FaeI CATG 1 cut(s) 295
FaiI YATR 5 cut(s) 50, 240, 267, 293, 327
FatI CATG 1 cut(s) 291
FspBI CTAG 1 cut(s) 406
Hin1II CATG 1 cut(s) 295
HinfI GANTC 2 cut(s) 22, 347
HphI GGTGA 2 cut(s) 124, 311
Hpy166II GTNNAC 2 cut(s) 127, 218
Hpy188I TCNGA 3 cut(s) 144, 235, 287
Hpy188III TCNNGA 4 cut(s) 161, 255, 277, 359
Hpy8I GTNNAC 2 cut(s) 127, 218
HpyAV CCTTC 2 cut(s) 261, 375
HpyCH4V TGCA 2 cut(s) 80, 338
HpyF3I CTNAG 2 cut(s) 18, 141
Hsp92II CATG 1 cut(s) 295
Kzo9I GATC 2 cut(s) 198, 316
LpnPI CCDG 3 cut(s) 240, 329, 383
MaeI CTAG 1 cut(s) 406
MalI GATC 2 cut(s) 200, 318
MboI GATC 2 cut(s) 198, 316
MboII GAAGA 1 cut(s) 222
MluCI AATT 4 cut(s) 62, 74, 258, 262
MlyI GAGTC 2 cut(s) 16, 341
MmeI TCCRAC 2 cut(s) 50, 151
MnlI CCTC 8 cut(s) 52, 177, 206, 235, 238, 258, 281, 332
MseI TTAA 1 cut(s) 261
NdeII GATC 2 cut(s) 198, 316
NlaIII CATG 1 cut(s) 295
PleI GAGTC 2 cut(s) 16, 341
PpsI GAGTC 2 cut(s) 16, 341
PshBI ATTAAT 1 cut(s) 261
PspPI GGNCC 1 cut(s) 215
RsaI GTAC 2 cut(s) 120, 354
RsaNI GTAC 2 cut(s) 119, 353
SaqAI TTAA 1 cut(s) 261
Sau3AI GATC 2 cut(s) 198, 316
Sau96I GGNCC 1 cut(s) 215
SchI GAGTC 2 cut(s) 16, 341
SetI ASST 4 cut(s) 217, 227, 250, 324
SinI GGWCC 1 cut(s) 215
SmlI CTYRAG 4 cut(s) 43, 161, 277, 376
SmoI CTYRAG 4 cut(s) 43, 161, 277, 376
Sse9I AATT 4 cut(s) 62, 74, 258, 262
SspMI CTAG 1 cut(s) 406
TasI AATT 4 cut(s) 62, 74, 258, 262
Tru1I TTAA 1 cut(s) 261
Tru9I TTAA 1 cut(s) 261
TscAI CASTG 1 cut(s) 39
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 340
TspRI CASTG 1 cut(s) 39
VpaK11BI GGWCC 1 cut(s) 215
VspI ATTAAT 1 cut(s) 261
XapI RAATTY 2 cut(s) 62, 74
XspI CTAG 1 cut(s) 406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.