No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000029623 RLG00000029888 |
| rosa_roxburghii | Rroxscaffold_2G00147060 |
| rosa_samantha | Rh4DG180800 Rh5AG388400 |
| rosa_wichuraiana | Rw5G031790 Rw6G014900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 94 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 2 cut(s) | 61, 278 |
| AdeI | CACNNNGTG | 1 cut(s) | 181 |
| AfaI | GTAC | 1 cut(s) | 207 |
| AflIII | ACRYGT | 1 cut(s) | 148 |
| AgsI | TTSAA | 4 cut(s) | 27, 44, 212, 256 |
| AluBI | AGCT | 2 cut(s) | 187, 251 |
| AluI | AGCT | 2 cut(s) | 187, 251 |
| Alw26I | GTCTC | 1 cut(s) | 140 |
| AlwI | GGATC | 1 cut(s) | 94 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApoI | RAATTY | 2 cut(s) | 61, 278 |
| AseI | ATTAAT | 1 cut(s) | 99 |
| BbsI | GAAGAC | 1 cut(s) | 86 |
| BccI | CCATC | 2 cut(s) | 12, 221 |
| BcoDI | GTCTC | 1 cut(s) | 140 |
| BglII | AGATCT | 1 cut(s) | 214 |
| BmsI | GCATC | 2 cut(s) | 232, 254 |
| BpiI | GAAGAC | 1 cut(s) | 86 |
| BpuEI | CTTGAG | 2 cut(s) | 122, 276 |
| BseRI | GAGGAG | 1 cut(s) | 102 |
| BsgI | GTGCAG | 1 cut(s) | 255 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsmAI | GTCTC | 1 cut(s) | 140 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 2 cut(s) | 86, 214 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspPI | GGATC | 1 cut(s) | 94 |
| BssMI | GATC | 2 cut(s) | 86, 214 |
| Bst4CI | ACNGT | 1 cut(s) | 181 |
| BstKTI | GATC | 2 cut(s) | 89, 217 |
| BstMAI | GTCTC | 1 cut(s) | 140 |
| BstMBI | GATC | 2 cut(s) | 86, 214 |
| BstNSI | RCATGY | 1 cut(s) | 152 |
| BstV2I | GAAGAC | 1 cut(s) | 86 |
| BstX2I | RGATCY | 1 cut(s) | 214 |
| BstYI | RGATCY | 1 cut(s) | 214 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsIMutI | CAGTG | 1 cut(s) | 186 |
| CseI | GACGC | 1 cut(s) | 43 |
| Csp6I | GTAC | 1 cut(s) | 206 |
| CviAII | CATG | 1 cut(s) | 149 |
| CviJI | RGCY | 4 cut(s) | 5, 40, 187, 251 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 40, 187, 251 |
| CviQI | GTAC | 1 cut(s) | 206 |
| DpnI | GATC | 2 cut(s) | 88, 216 |
| DpnII | GATC | 2 cut(s) | 86, 214 |
| DraIII | CACNNNGTG | 1 cut(s) | 181 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| EcoT22I | ATGCAT | 1 cut(s) | 247 |
| FaeI | CATG | 1 cut(s) | 152 |
| FaiI | YATR | 3 cut(s) | 150, 224, 266 |
| FatI | CATG | 1 cut(s) | 148 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HgaI | GACGC | 1 cut(s) | 43 |
| Hin1II | CATG | 1 cut(s) | 152 |
| HinfI | GANTC | 2 cut(s) | 8, 236 |
| Hpy188I | TCNGA | 1 cut(s) | 241 |
| Hpy188III | TCNNGA | 1 cut(s) | 293 |
| HpyCH4III | ACNGT | 1 cut(s) | 181 |
| HpyCH4V | TGCA | 2 cut(s) | 245, 272 |
| Hsp92II | CATG | 1 cut(s) | 152 |
| Kzo9I | GATC | 2 cut(s) | 86, 214 |
| LpnPI | CCDG | 4 cut(s) | 28, 69, 145, 216 |
| LweI | GCATC | 2 cut(s) | 232, 254 |
| MaeIII | GTNAC | 2 cut(s) | 106, 151 |
| MalI | GATC | 2 cut(s) | 88, 216 |
| MboI | GATC | 2 cut(s) | 86, 214 |
| MboII | GAAGA | 4 cut(s) | 91, 186, 224, 245 |
| MflI | RGATCY | 1 cut(s) | 214 |
| MluCI | AATT | 3 cut(s) | 61, 100, 278 |
| MlyI | GAGTC | 1 cut(s) | 2 |
| MnlI | CCTC | 3 cut(s) | 123, 127, 183 |
| Mph1103I | ATGCAT | 1 cut(s) | 247 |
| MseI | TTAA | 3 cut(s) | 59, 99, 284 |
| NdeII | GATC | 2 cut(s) | 86, 214 |
| NlaIII | CATG | 1 cut(s) | 152 |
| NsiI | ATGCAT | 1 cut(s) | 247 |
| NspI | RCATGY | 1 cut(s) | 152 |
| PciI | ACATGT | 1 cut(s) | 148 |
| PfeI | GAWTC | 1 cut(s) | 236 |
| PleI | GAGTC | 1 cut(s) | 2 |
| PpsI | GAGTC | 1 cut(s) | 2 |
| PscI | ACATGT | 1 cut(s) | 148 |
| PshBI | ATTAAT | 1 cut(s) | 99 |
| PsuI | RGATCY | 1 cut(s) | 214 |
| RsaI | GTAC | 1 cut(s) | 207 |
| RsaNI | GTAC | 1 cut(s) | 206 |
| SaqAI | TTAA | 3 cut(s) | 59, 99, 284 |
| Sau3AI | GATC | 2 cut(s) | 86, 214 |
| SchI | GAGTC | 1 cut(s) | 2 |
| SetI | ASST | 3 cut(s) | 189, 253, 319 |
| SfaNI | GCATC | 2 cut(s) | 232, 254 |
| SgeI | CNNG | 9 cut(s) | 27, 96, 144, 151, 161, 215, 221, 272, 305 |
| SmlI | CTYRAG | 2 cut(s) | 137, 291 |
| SmoI | CTYRAG | 2 cut(s) | 137, 291 |
| Sse9I | AATT | 3 cut(s) | 61, 100, 278 |
| SspI | AATATT | 1 cut(s) | 97 |
| TaaI | ACNGT | 1 cut(s) | 181 |
| TasI | AATT | 3 cut(s) | 61, 100, 278 |
| TatI | WGTACW | 1 cut(s) | 205 |
| TfiI | GAWTC | 1 cut(s) | 236 |
| Tru1I | TTAA | 3 cut(s) | 59, 99, 284 |
| Tru9I | TTAA | 3 cut(s) | 59, 99, 284 |
| TscAI | CASTG | 1 cut(s) | 186 |
| TspDTI | ATGAA | 1 cut(s) | 92 |
| TspRI | CASTG | 1 cut(s) | 186 |
| VspI | ATTAAT | 1 cut(s) | 99 |
| XapI | RAATTY | 2 cut(s) | 61, 278 |
| XceI | RCATGY | 1 cut(s) | 152 |
| Zsp2I | ATGCAT | 1 cut(s) | 247 |