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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000029623 RLG00000029888 |
| rosa_roxburghii | Rroxscaffold_2G00147060 |
| rosa_samantha | Rh4DG180800 Rh5AG388400 |
| rosa_wichuraiana | Rw5G031790 Rw6G014900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 94 |
| AcsI | RAATTY | 1 cut(s) | 229 |
| AdeI | CACNNNGTG | 1 cut(s) | 130 |
| AfaI | GTAC | 1 cut(s) | 159 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 232 |
| AflIII | ACRYGT | 1 cut(s) | 97 |
| AgsI | TTSAA | 4 cut(s) | 27, 44, 164, 208 |
| AluBI | AGCT | 2 cut(s) | 139, 203 |
| AluI | AGCT | 2 cut(s) | 139, 203 |
| Alw26I | GTCTC | 1 cut(s) | 61 |
| AlwI | GGATC | 1 cut(s) | 94 |
| ApoI | RAATTY | 1 cut(s) | 229 |
| BbsI | GAAGAC | 1 cut(s) | 86 |
| BccI | CCATC | 1 cut(s) | 173 |
| BcoDI | GTCTC | 1 cut(s) | 61 |
| BfaI | CTAG | 1 cut(s) | 15 |
| BglII | AGATCT | 1 cut(s) | 166 |
| BmsI | GCATC | 2 cut(s) | 184, 206 |
| BpiI | GAAGAC | 1 cut(s) | 86 |
| BpuEI | CTTGAG | 1 cut(s) | 227 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 125, 155 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 232 |
| Bse3DI | GCAATG | 1 cut(s) | 89 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 232 |
| BseMI | GCAATG | 1 cut(s) | 89 |
| BsgI | GTGCAG | 1 cut(s) | 206 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 232 |
| BsmAI | GTCTC | 1 cut(s) | 61 |
| BsmBI | CGTCTC | 1 cut(s) | 61 |
| Bsp143I | GATC | 2 cut(s) | 86, 166 |
| BspPI | GGATC | 1 cut(s) | 94 |
| BsrDI | GCAATG | 1 cut(s) | 89 |
| BssMI | GATC | 2 cut(s) | 86, 166 |
| Bst4CI | ACNGT | 1 cut(s) | 130 |
| BstKTI | GATC | 2 cut(s) | 89, 169 |
| BstMAI | GTCTC | 1 cut(s) | 61 |
| BstMBI | GATC | 2 cut(s) | 86, 166 |
| BstNSI | RCATGY | 1 cut(s) | 101 |
| BstV2I | GAAGAC | 1 cut(s) | 86 |
| BstX2I | RGATCY | 1 cut(s) | 166 |
| BstYI | RGATCY | 1 cut(s) | 166 |
| BtsIMutI | CAGTG | 1 cut(s) | 135 |
| CseI | GACGC | 1 cut(s) | 43 |
| Csp6I | GTAC | 1 cut(s) | 158 |
| CviAII | CATG | 1 cut(s) | 98 |
| CviJI | RGCY | 4 cut(s) | 5, 40, 139, 203 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 40, 139, 203 |
| CviQI | GTAC | 1 cut(s) | 158 |
| DpnI | GATC | 2 cut(s) | 88, 168 |
| DpnII | GATC | 2 cut(s) | 86, 166 |
| DraIII | CACNNNGTG | 1 cut(s) | 130 |
| EcoT22I | ATGCAT | 1 cut(s) | 199 |
| Esp3I | CGTCTC | 1 cut(s) | 61 |
| FaeI | CATG | 1 cut(s) | 101 |
| FaiI | YATR | 5 cut(s) | 66, 99, 176, 217, 273 |
| FatI | CATG | 1 cut(s) | 97 |
| FspBI | CTAG | 1 cut(s) | 15 |
| HgaI | GACGC | 1 cut(s) | 43 |
| Hin1II | CATG | 1 cut(s) | 101 |
| HinfI | GANTC | 2 cut(s) | 8, 188 |
| Hpy188I | TCNGA | 1 cut(s) | 193 |
| Hpy188III | TCNNGA | 1 cut(s) | 244 |
| HpyCH4III | ACNGT | 1 cut(s) | 130 |
| HpyCH4V | TGCA | 2 cut(s) | 197, 223 |
| Hsp92II | CATG | 1 cut(s) | 101 |
| Kzo9I | GATC | 2 cut(s) | 86, 166 |
| LpnPI | CCDG | 3 cut(s) | 69, 168, 281 |
| LweI | GCATC | 2 cut(s) | 184, 206 |
| MaeI | CTAG | 1 cut(s) | 15 |
| MaeIII | GTNAC | 1 cut(s) | 100 |
| MalI | GATC | 2 cut(s) | 88, 168 |
| MboI | GATC | 2 cut(s) | 86, 166 |
| MboII | GAAGA | 4 cut(s) | 91, 138, 176, 197 |
| MflI | RGATCY | 1 cut(s) | 166 |
| MluCI | AATT | 2 cut(s) | 61, 229 |
| MlyI | GAGTC | 1 cut(s) | 2 |
| MnlI | CCTC | 1 cut(s) | 132 |
| Mph1103I | ATGCAT | 1 cut(s) | 199 |
| NdeII | GATC | 2 cut(s) | 86, 166 |
| NlaIII | CATG | 1 cut(s) | 101 |
| NsiI | ATGCAT | 1 cut(s) | 199 |
| NspI | RCATGY | 1 cut(s) | 101 |
| PciI | ACATGT | 1 cut(s) | 97 |
| PfeI | GAWTC | 1 cut(s) | 188 |
| PleI | GAGTC | 1 cut(s) | 2 |
| PpsI | GAGTC | 1 cut(s) | 2 |
| PscI | ACATGT | 1 cut(s) | 97 |
| PsuI | RGATCY | 1 cut(s) | 166 |
| RsaI | GTAC | 1 cut(s) | 159 |
| RsaNI | GTAC | 1 cut(s) | 158 |
| Sau3AI | GATC | 2 cut(s) | 86, 166 |
| SchI | GAGTC | 1 cut(s) | 2 |
| SetI | ASST | 2 cut(s) | 141, 205 |
| SfaNI | GCATC | 2 cut(s) | 184, 206 |
| SgeI | CNNG | 9 cut(s) | 27, 32, 96, 110, 167, 173, 223, 256, 280 |
| SmlI | CTYRAG | 1 cut(s) | 242 |
| SmoI | CTYRAG | 1 cut(s) | 242 |
| Sse9I | AATT | 2 cut(s) | 61, 229 |
| SspMI | CTAG | 1 cut(s) | 15 |
| TaaI | ACNGT | 1 cut(s) | 130 |
| TasI | AATT | 2 cut(s) | 61, 229 |
| TatI | WGTACW | 1 cut(s) | 157 |
| TfiI | GAWTC | 1 cut(s) | 188 |
| TscAI | CASTG | 1 cut(s) | 135 |
| TspDTI | ATGAA | 1 cut(s) | 92 |
| TspRI | CASTG | 1 cut(s) | 135 |
| XapI | RAATTY | 1 cut(s) | 229 |
| XceI | RCATGY | 1 cut(s) | 101 |
| XspI | CTAG | 1 cut(s) | 15 |
| Zsp2I | ATGCAT | 1 cut(s) | 199 |