RLG00000031283

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
3678298 .. 3680551
2254 bp
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UTR
Exon/CDS
Intron
RLM00000031283

Sequence Viewer

Length: 510 bp
ATGACTGCATTACTAGAAACGTCTGAGATTTTGAAACTTGGAACGTTGTCGTTTGAATTCTCAAAGAAAATTAAGATGATGAGGAAGACTTTGTGCAAAAGCCAAGTTCAGGAAGAACAGTCAAGGGGTATCAGTAGATGGAATGAAGAACAAGTGAAGGATGGTGACCTTTTAGCGTCTGAAGAAATTGTATGGGTTGCAAACAGGAACAATCCCATCAGTGATATTTCTGGTGTCCTCACAATAAGCAGATACTCTAATCCCAGGTATGAAAGTGGGGATAATTGGGAAACTGGGCTAGAATGGATTATAACATCTTGGAAGTCACAAGGTGACCCTGAAGCTGGGGACTATACCGATAGGCTATTTTCAAATCAAACTGCAATCCCTGAATTTTTTATATACAAAGGTACATGCCGGTATTGGAGAAGTGATTATTCCGGGATTAATTTTGTCAGTAACCAGTACAATACTAATATGTGGTATGGACAGCGTGGTGCCAACAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

170

Amino Acids

19.54

Weight (kDa)

5.14

Isoelectric Point (pI)

26.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030938)

Species Orthologous Gene IDs
rosa_laevigata RLG00000031283
rosa_roxburghii Rroxscaffold_1G00069630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 311
AccB1I GGYRCC 1 cut(s) 497
AclI AACGTT 1 cut(s) 44
AcsI RAATTY 2 cut(s) 56, 392
AcuI CTGAAG 2 cut(s) 201, 360
AdeI CACNNNGTG 1 cut(s) 332
AfaI GTAC 2 cut(s) 412, 467
AfiI CCNNNNNNNGG 2 cut(s) 109, 344
AgsI TTSAA 3 cut(s) 34, 56, 372
AjnI CCWGG 1 cut(s) 263
AluBI AGCT 1 cut(s) 344
AluI AGCT 1 cut(s) 344
ApoI RAATTY 2 cut(s) 56, 392
AseI ATTAAT 1 cut(s) 447
AsuC2I CCSGG 1 cut(s) 442
AsuHPI GGTGA 2 cut(s) 176, 344
BanI GGYRCC 1 cut(s) 497
BbsI GAAGAC 1 cut(s) 92
BccI CCATC 3 cut(s) 132, 155, 224
BciT130I CCWGG 1 cut(s) 265
BcnI CCSGG 1 cut(s) 442
BfaI CTAG 2 cut(s) 14, 299
Bme1390I CCNGG 2 cut(s) 265, 442
BmiI GGNNCC 1 cut(s) 499
BmrFI CCNGG 2 cut(s) 265, 442
BmrI ACTGGG 1 cut(s) 303
BmuI ACTGGG 1 cut(s) 303
BpiI GAAGAC 1 cut(s) 92
BpuMI CCSGG 1 cut(s) 442
BsaJI CCNNGG 1 cut(s) 263
Bsc4I CCNNNNNNNGG 2 cut(s) 109, 344
Bse118I RCCGGY 1 cut(s) 417
Bse1I ACTGG 2 cut(s) 298, 463
BseBI CCWGG 1 cut(s) 265
BseDI CCNNGG 1 cut(s) 263
BseGI GGATG 1 cut(s) 166
BseLI CCNNNNNNNGG 2 cut(s) 109, 344
BseMII CTCAG 1 cut(s) 15
BseNI ACTGG 2 cut(s) 298, 463
BseYI CCCAGC 1 cut(s) 344
BshNI GGYRCC 1 cut(s) 497
BsiSI CCGG 2 cut(s) 418, 441
BslFI GGGAC 1 cut(s) 362
BslI CCNNNNNNNGG 2 cut(s) 109, 344
BsmFI GGGAC 1 cut(s) 362
BspCNI CTCAG 1 cut(s) 16
BspLI GGNNCC 1 cut(s) 499
BspT107I GGYRCC 1 cut(s) 497
BsrFI RCCGGY 1 cut(s) 417
BsrI ACTGG 2 cut(s) 298, 463
BssAI RCCGGY 1 cut(s) 417
BssECI CCNNGG 1 cut(s) 263
Bst2UI CCWGG 1 cut(s) 265
Bst4CI ACNGT 2 cut(s) 120, 506
BstDEI CTNAG 1 cut(s) 24
BstEII GGTNACC 2 cut(s) 164, 332
BstF5I GGATG 1 cut(s) 166
BstNI CCWGG 1 cut(s) 265
BstNSI RCATGY 1 cut(s) 417
BstPI GGTNACC 2 cut(s) 164, 332
BstSCI CCNGG 2 cut(s) 263, 440
BstV2I GAAGAC 1 cut(s) 92
BtsCI GGATG 1 cut(s) 166
BtsIMutI CAGTG 1 cut(s) 226
Cfr10I RCCGGY 1 cut(s) 417
CseI GACGC 1 cut(s) 165
Csp6I GTAC 2 cut(s) 411, 466
CviAII CATG 1 cut(s) 414
CviJI RGCY 4 cut(s) 102, 298, 344, 364
CviKI_1 RGCY 4 cut(s) 102, 298, 344, 364
CviQI GTAC 2 cut(s) 411, 466
DdeI CTNAG 1 cut(s) 24
DraIII CACNNNGTG 1 cut(s) 332
Eco57I CTGAAG 2 cut(s) 201, 360
Eco91I GGTNACC 2 cut(s) 164, 332
EcoO65I GGTNACC 2 cut(s) 164, 332
EcoRI GAATTC 1 cut(s) 56
EcoRII CCWGG 1 cut(s) 263
FaeI CATG 1 cut(s) 417
FaiI YATR 9 cut(s) 193, 270, 311, 354, 401, 403, 415, 479, 486
FaqI GGGAC 1 cut(s) 362
FatI CATG 1 cut(s) 413
FokI GGATG 1 cut(s) 173
FspBI CTAG 2 cut(s) 14, 299
GsaI CCCAGC 1 cut(s) 348
HapII CCGG 2 cut(s) 418, 441
HgaI GACGC 1 cut(s) 165
Hin1II CATG 1 cut(s) 417
HpaII CCGG 2 cut(s) 418, 441
HphI GGTGA 2 cut(s) 176, 344
Hpy188I TCNGA 2 cut(s) 25, 181
Hpy188III TCNNGA 1 cut(s) 110
HpyAV CCTTC 1 cut(s) 151
HpyCH4III ACNGT 2 cut(s) 120, 506
HpyCH4IV ACGT 2 cut(s) 20, 44
HpyCH4V TGCA 4 cut(s) 8, 96, 200, 383
HpyF3I CTNAG 1 cut(s) 24
HpySE526I ACGT 2 cut(s) 20, 44
Hsp92II CATG 1 cut(s) 417
MaeI CTAG 2 cut(s) 14, 299
MaeII ACGT 2 cut(s) 20, 44
MaeIII GTNAC 4 cut(s) 164, 324, 332, 458
MboII GAAGA 4 cut(s) 97, 125, 158, 194
MluCI AATT 6 cut(s) 56, 69, 186, 283, 392, 448
MnlI CCTC 2 cut(s) 75, 248
MseI TTAA 3 cut(s) 72, 447, 508
MspI CCGG 2 cut(s) 418, 441
MspR9I CCNGG 2 cut(s) 265, 442
MvaI CCWGG 1 cut(s) 265
NciI CCSGG 1 cut(s) 442
NlaIII CATG 1 cut(s) 417
NlaIV GGNNCC 1 cut(s) 499
NmuCI GTSAC 3 cut(s) 164, 324, 332
NspI RCATGY 1 cut(s) 417
PfoI TCCNGGA 1 cut(s) 440
PshBI ATTAAT 1 cut(s) 447
PsiI TTATAA 1 cut(s) 311
Psp1406I AACGTT 1 cut(s) 44
Psp6I CCWGG 1 cut(s) 263
PspEI GGTNACC 2 cut(s) 164, 332
PspFI CCCAGC 1 cut(s) 344
PspGI CCWGG 1 cut(s) 263
PspN4I GGNNCC 1 cut(s) 499
RsaI GTAC 2 cut(s) 412, 467
RsaNI GTAC 2 cut(s) 411, 466
SaqAI TTAA 3 cut(s) 72, 447, 508
ScrFI CCNGG 2 cut(s) 265, 442
SetI ASST 7 cut(s) 23, 47, 171, 269, 334, 346, 412
Sse9I AATT 6 cut(s) 56, 69, 186, 283, 392, 448
SspMI CTAG 2 cut(s) 14, 299
StyD4I CCNGG 2 cut(s) 263, 440
TaaI ACNGT 2 cut(s) 120, 506
TaiI ACGT 2 cut(s) 23, 47
TasI AATT 6 cut(s) 56, 69, 186, 283, 392, 448
TatI WGTACW 1 cut(s) 465
Tru1I TTAA 3 cut(s) 72, 447, 508
Tru9I TTAA 3 cut(s) 72, 447, 508
TscAI CASTG 1 cut(s) 226
TseFI GTSAC 3 cut(s) 164, 324, 332
Tsp45I GTSAC 3 cut(s) 164, 324, 332
TspDTI ATGAA 2 cut(s) 159, 285
TspRI CASTG 1 cut(s) 226
VspI ATTAAT 1 cut(s) 447
XapI RAATTY 2 cut(s) 56, 392
XceI RCATGY 1 cut(s) 417
XspI CTAG 2 cut(s) 14, 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.