Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0025297

Physical Location & Seq

Genomic Coordinates Forward (+)

17372039 .. 17377792

Gene Structure 5754 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032657

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2713 bp

ATGGATAGTTCTGCAAACTTTCCCAACCCTGTCTATCATTTCAATATTGCTCTCTGTTTCCTCCTTTGGTTTTTAGCCTCTTCATGCCTAAACACTAGTAAACTCTGCTTGGGAGATGGCCTTCCAGTTGTGAAATGCATCGACAAAGAGAGAAGCGCGCTTCTCATCTTTAAGGCAGATCTTATCGATGCTTCGGGTAGGCTATCATCCTGGGAGGGTCAAAATTGTTGTCAATGGAAAGGGATTTCATGCAACAACCGCACTGGTCATGTTGAAAAGATAGACCTCTGGAATACAAGTCCAGCTCCATCTATTGATGCTGAAGACCGGGAGTTGGAGGCTTATTATGATTCCTTTTTGGGGGGTAAGATAAATCCTTCTTTGCTTAGCTTGAAATATATGAGTTACTTAGACTTGAGCTCGAATGACTTTCAAGGGCTTCAAATTCCTAAGTTCTTTGGTCAGCTTAAAAGTCTGAAGTACCTCAATGTCTCATTTTCATCTTTTGAGGGCCAGATTCCACCTCATCTTGGTAACCTATCAAACTTGAACTATCTTGACCTAAGTGAGTTACACGTGTATAGATGCAACATTGAAAGCCTTCCACCTTCACTTCACACCATGAACCTCACATCACTTTTGATCCTTGATATGTCATTCAATGATTTTAAGTTTCCATTTCCAAAGTGGGTCTTTAATCTAACTAGCCTCAGAGAACTTCACTTGGCCTCAAATTCTTTCAGCGGTCCCTTTCCCAATGATTTCGTTAACCTGAAATCATTGGAAGAACTTGATTTATCTCTTAATGGCCTTCAAGGTCGAATTCCCAAATTCTTTGGAAATCTCTGCAACCTAAAGACCTTAATTCTAGCCGAAAATGCATTTGATCAGGGTATTCCAGAGTTTTTGGATGGTTTATCAGGTTGTGCAAATAATAAGTTGGAGACACTAGACTTGTCTAGTAATAAGCTGGTAGGCGCATTGCCTGCCTCCTTAGGGATGCTCCCCCATTTGCAGTACCTTAACCTCTTCGACAATCATTTGAATGGATCCATCCCAGAAAGTTTGGGACAACTGTCTGAGCTAGTTTATCTAGACCTGTCGGGCAACTCATTGGGAGGCTTTTTAACTGAAGCCCATTTCATAGATCTCGCAAAGTTAAAATACATTGCGCTGGGCAATATCAGTGTCCCCAACCAGCTACCTTCCATCATTTTCAATGTGGCTTATAAGTGGGTTCCTCCTTTCAAGCTTGACACCATTGCCATCAGGAACTGTCAGGTAGGTCCTGCCTTTTCACTATGGCTTCTATCTCAAACTGAACCAGTATATGTCACTCTAAGCAATACAGGCATCTCGGATTCCATACCAGAGGAATGGTTCGTGAAAATATCTTCCCAACTCCAATTTTTGGATTTATCTTTCAACGAAATTCGTGGAAAGCTCCCAGTCCAATTGATAGTTCCAAATTTAGTGGGTCTAGATTTGAGACATAATCAATTCCGCGGCTCACTCCCGCTTTGGTTATATGTCAAGTTCAATGCTTATGCCTTATATCAAGCGTATGAACAACAAATAATGGTGACCAGAGGAAGAGAATTGCAATATAACAAGACTCTGAGGTGGGTAAAAAGCATAGATCTTTCCTCAAATAGTTTGGAAGGTGAAATCCCTGAAAAAATCTGCAGTCTCTTCGCATTGGTTATCTTGAACTTGTCGATGAATCATCTAAGTGGAAATATTCCCTCGAAAATTGGAAACTTGCGGTCGCTCGAATTCCTTGATCTCTCAGGCAACCACCTTTCGGGACGAATTCCTCAGAGCATTTCATCTTTAACCTATTTGTCTCACTTGAATTTGTCTAACAACGAATTGAGCGGAAGAATTCCTTTGGGCAACCAACTTCAAGCACTTGATGATTCCACCAATATTTATGGGGGCAATCCATCACTTTGTGGGTTTCCCCTTTTAAACAAGTGCCCAGGAGATGACACACCTCCACAACCCACTTTTCCTCGTGGGACAAGACATGAAGATGATAAAAAGCTTGACGACATGACGAACTCCGGCAATTCGCGACGAAGAGCAGACTGCTCTTCACACCCAAGCAATTGCTCAGGACACCCAAGCTCTATCTTCTCACTGAATCTGTCGAACACCGTGTTGCAAATCGAACAACTCGCCCTCACGGTCAAGATCGAGCTTCTGCACTGGCCAATTCTCATTCGGCCCGGATCTCATCTTAGCCTTCCGTTGTTGCAACCATATTCGCTGCACGAGCTTTTCCGGCTCATCTCCAATTCACTCACCTTCGCCGGAGTCGATCTGAGATCGAGATGCAGACCTTCGATTCGCTGCGTTTTGATTTCACGATTTGCGTGCTCGACTTGGCTGTGTGAGCCAGTGGCTCACCTTCTTCCTCTTTCTTCTTCAACCACACACCTCGATTTCCGAGCTCACGCTGCTTCTCCTCCTCAGCTCCAATACGACGCCGTCCTATTCGCCCTGGCCGGAACGGACGACATTTCGAGGTCTGGAGAAGCTGCGGAGGTTAAAGGAGGAGAGTTGGAGAGTCAGAGTATATGGAATCAGATGAAGGAGATTGTCATGTTTACTGGGCCGGCTACCGGGATCTGGATCAGCGGCCCACTTATGAGTCTCATCGACACTGTCGTCGTCGGTCAGGGAAGCTCCATTGAGCTTGCCGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0007275 GO:0007389 GO:0008150 GO:0009505 GO:0009531 GO:0009553 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0010154 GO:0010453 GO:0022414 GO:0022603 GO:0030312 GO:0032501 GO:0032502 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045595 GO:0048226 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051302 GO:0061458 GO:0065001 GO:0065007 GO:0071944 GO:0090558 GO:0090708 GO:0099402 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

904

Amino Acids

100.16

Weight (kDa)

5.72

Isoelectric Point (pI)

43.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	48 - 85	1e-10	Leucine rich repeat N-terminal domain
LRR_14	PF23598	124 - 387	2.7e-21	Leucine-rich repeat region
LRR_8	PF13855	213 - 271	5e-06	Leucine rich repeat
LRR_8	PF13855	313 - 372	3.1e-09	Leucine rich repeat
LRR_14	PF23598	552 - 625	2e-08	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0025297)

Species	Orthologous Gene IDs
rosa_laevigata	RLG00000013366 RLG00000017155 RLG00000032657

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1230
AasI	GACNNNNNNGTC	1 cut(s)	2672
AccB7I	CCANNNNNTGG	1 cut(s)	1411
AccBSI	CCGCTC	1 cut(s)	1878
AccII	CGCG	3 cut(s)	158, 1506, 2077
AclWI	GGATC	6 cut(s)	637, 1044, 1057, 2242, 2639, 2645
AcoI	YGGCCR	2 cut(s)	2213, 2508
AcuI	CTGAAG	3 cut(s)	342, 497, 1152
AcvI	CACGTG	1 cut(s)	577
AcyI	GRCGYC	1 cut(s)	2490
AdeI	CACNNNGTG	1 cut(s)	1955
AfaI	GTAC	2 cut(s)	482, 1019
AfiI	CCNNNNNNNGG	8 cut(s)	334, 360, 530, 996, 1411, 1804, 2627, 2634
AflIII	ACRYGT	2 cut(s)	574, 576
AhlI	ACTAGT	1 cut(s)	95
AjnI	CCWGG	3 cut(s)	209, 1981, 2505
AjuI	GAANNNNNNNTTGG	2 cut(s)	1446, 1478
Alw21I	GWGCWC	3 cut(s)	422, 2384, 2458
Alw26I	GTCTC	6 cut(s)	496, 938, 1483, 1694, 1851, 2663
AlwI	GGATC	6 cut(s)	637, 1044, 1057, 2242, 2639, 2645
AlwNI	CAGNNNCTG	1 cut(s)	1275
AoxI	GGCC	9 cut(s)	118, 511, 726, 808, 2213, 2228, 2508, 2618, 2644
ApeKI	GCWGC	4 cut(s)	2272, 2355, 2462, 2543
ArsI	GACNNNNNNTTYG	4 cut(s)	214, 246, 2334, 2366
Asp700I	GAANNNNTTC	1 cut(s)	600
AspLEI	GCGC	4 cut(s)	158, 160, 980, 1174
AspS9I	GGNCC	6 cut(s)	511, 746, 1286, 2229, 2618, 2645
AsuC2I	CCSGG	3 cut(s)	329, 2232, 2629
AsuHPI	GGTGA	4 cut(s)	1594, 1676, 2299, 2402
AvaII	GGWCC	2 cut(s)	746, 1286
AxyI	CCTNAGG	1 cut(s)	994
BaeGI	GKGCMC	1 cut(s)	1982
BalI	TGGCCA	1 cut(s)	2215
BamHI	GGATCC	1 cut(s)	1049
BanII	GRGCYC	2 cut(s)	422, 2458
BauI	CACGAG	2 cut(s)	2016, 2276
BbrPI	CACGTG	1 cut(s)	577
BbsI	GAAGAC	1 cut(s)	330
Bbv12I	GWGCWC	3 cut(s)	422, 2384, 2458
BbvCI	CCTCAGC	1 cut(s)	2475
BbvI	GCAGC	4 cut(s)	2259, 2342, 2449, 2530
BccI	CCATC	7 cut(s)	110, 316, 905, 1061, 1217, 1274, 1954
BceAI	ACGGC	1 cut(s)	2477
BcgI	CGANNNNNNTGC	4 cut(s)	1675, 1709, 2361, 2395
BciT130I	CCWGG	3 cut(s)	211, 1983, 2507
BclI	TGATCA	1 cut(s)	886
BcnI	CCSGG	3 cut(s)	329, 2232, 2629
BcoDI	GTCTC	6 cut(s)	496, 938, 1483, 1694, 1851, 2663
BcuI	ACTAGT	1 cut(s)	95
BfaI	CTAG	8 cut(s)	96, 705, 869, 950, 960, 1085, 1094, 1481
BfmI	CTRYAG	1 cut(s)	1684
BglII	AGATCT	3 cut(s)	178, 1147, 1639
BisI	GCNGC	7 cut(s)	1507, 2273, 2356, 2463, 2544, 2644, 2706
BlpI	GCTNAGC	1 cut(s)	386
BlsI	GCNGC	7 cut(s)	1508, 2274, 2357, 2464, 2545, 2645, 2707
Bme1390I	CCNGG	6 cut(s)	211, 329, 1983, 2232, 2507, 2629
Bme18I	GGWCC	2 cut(s)	746, 1286
BmgT120I	GGNCC	6 cut(s)	511, 746, 1286, 2229, 2618, 2645
BmiI	GGNNCC	3 cut(s)	748, 1051, 1239
BmrFI	CCNGG	6 cut(s)	211, 329, 1983, 2232, 2507, 2629
BmrI	ACTGGG	2 cut(s)	1442, 2625
BmsI	GCATC	7 cut(s)	147, 178, 307, 575, 990, 1362, 2327
BmuI	ACTGGG	2 cut(s)	1442, 2625
BoxI	GACNNNNGTC	1 cut(s)	1075
BpiI	GAAGAC	1 cut(s)	330
BpmI	CTGGAG	1 cut(s)	2556
Bpu10I	CCTNAGC	2 cut(s)	2116, 2475
Bpu1102I	GCTNAGC	1 cut(s)	386
BpuEI	CTTGAG	1 cut(s)	436
BpuMI	CCSGG	3 cut(s)	329, 2232, 2629
Bsa29I	ATCGAT	1 cut(s)	186
BsaAI	YACGTR	1 cut(s)	577
BsaBI	GATNNNNATC	1 cut(s)	2636
BsaHI	GRCGYC	1 cut(s)	2490
BsaJI	CCNNGG	4 cut(s)	210, 1504, 1981, 2505
Bsc4I	CCNNNNNNNGG	8 cut(s)	334, 360, 530, 996, 1411, 1804, 2627, 2634
Bse118I	RCCGGY	1 cut(s)	2620
Bse1I	ACTGG	7 cut(s)	125, 268, 1325, 1448, 2216, 2402, 2620
Bse21I	CCTNAGG	1 cut(s)	994
Bse3DI	GCAATG	3 cut(s)	980, 1167, 1260
Bse8I	GATNNNNATC	1 cut(s)	2636
BseBI	CCWGG	3 cut(s)	211, 1983, 2507
BseCI	ATCGAT	1 cut(s)	186
BseDI	CCNNGG	4 cut(s)	210, 1504, 1981, 2505
BseGI	GGATG	4 cut(s)	206, 916, 1005, 1053
BseJI	GATNNNNATC	1 cut(s)	2636
BseLI	CCNNNNNNNGG	8 cut(s)	334, 360, 530, 996, 1411, 1804, 2627, 2634
BseMI	GCAATG	3 cut(s)	980, 1167, 1260
BseMII	CTCAG	8 cut(s)	724, 1071, 1610, 1803, 1832, 2130, 2318, 2489
BseNI	ACTGG	7 cut(s)	125, 268, 1325, 1448, 2216, 2402, 2620
BsePI	GCGCGC	1 cut(s)	156
BseRI	GAGGAG	3 cut(s)	2460, 2463, 2574
BseSI	GKGCMC	1 cut(s)	1982
BseXI	GCAGC	4 cut(s)	2259, 2342, 2449, 2530
BseYI	CCCAGC	1 cut(s)	1174
BsgI	GTGCAG	2 cut(s)	2192, 2258
Bsh1236I	CGCG	3 cut(s)	158, 1506, 2077
Bsh1285I	CGRYCG	1 cut(s)	1769
BshFI	GGCC	9 cut(s)	120, 513, 728, 810, 2215, 2230, 2510, 2620, 2646
BshVI	ATCGAT	1 cut(s)	186
BsiEI	CGRYCG	1 cut(s)	1769
BsiHKAI	GWGCWC	3 cut(s)	422, 2384, 2458
BsiSI	CCGG	8 cut(s)	328, 2067, 2232, 2287, 2316, 2511, 2621, 2628
BslFI	GGGAC	5 cut(s)	732, 1083, 1175, 1821, 2035
BslI	CCNNNNNNNGG	8 cut(s)	334, 360, 530, 996, 1411, 1804, 2627, 2634
BsmAI	GTCTC	6 cut(s)	496, 938, 1483, 1694, 1851, 2663
BsmFI	GGGAC	5 cut(s)	732, 1083, 1175, 1821, 2035
BsnI	GGCC	9 cut(s)	120, 513, 728, 810, 2215, 2230, 2510, 2620, 2646
Bsp1286I	GDGCHC	4 cut(s)	422, 1982, 2384, 2458
Bsp1720I	GCTNAGC	1 cut(s)	386
Bsp68I	TCGCGA	1 cut(s)	2077
BspANI	GGCC	9 cut(s)	120, 513, 728, 810, 2215, 2230, 2510, 2620, 2646
BspCNI	CTCAG	8 cut(s)	723, 1072, 1611, 1802, 1831, 2129, 2319, 2488
BspDI	ATCGAT	1 cut(s)	186
BspFNI	CGCG	3 cut(s)	158, 1506, 2077
BspLI	GGNNCC	3 cut(s)	748, 1051, 1239
BspMAI	CTGCAG	1 cut(s)	1688
BspPI	GGATC	6 cut(s)	637, 1044, 1057, 2242, 2639, 2645
BspQI	GCTCTTC	2 cut(s)	2077, 2101
BsrBI	CCGCTC	1 cut(s)	1878
BsrDI	GCAATG	3 cut(s)	980, 1167, 1260
BsrFI	RCCGGY	1 cut(s)	2620
BsrI	ACTGG	7 cut(s)	125, 268, 1325, 1448, 2216, 2402, 2620
BssAI	RCCGGY	1 cut(s)	2620
BssECI	CCNNGG	4 cut(s)	210, 1504, 1981, 2505
BssHII	GCGCGC	1 cut(s)	156
BssNI	GRCGYC	1 cut(s)	2490
BssSI	CACGAG	2 cut(s)	2016, 2276
Bst2BI	CACGAG	2 cut(s)	2016, 2276
Bst2UI	CCWGG	3 cut(s)	211, 1983, 2507
Bst4CI	ACNGT	5 cut(s)	1077, 1277, 2161, 2191, 2671
Bst6I	CTCTTC	6 cut(s)	85, 1034, 1588, 1697, 2077, 2101
BstACI	GRCGYC	1 cut(s)	2490
BstAPI	GCANNNNNTGC	1 cut(s)	986
BstBAI	YACGTR	1 cut(s)	577
BstC8I	GCNNGC	5 cut(s)	158, 987, 2380, 2622, 2703
BstDSI	CCRYGG	1 cut(s)	1504
BstEII	GGTNACC	2 cut(s)	533, 1582
BstF5I	GGATG	4 cut(s)	206, 916, 1005, 1053
BstFNI	CGCG	3 cut(s)	158, 1506, 2077
BstHHI	GCGC	4 cut(s)	158, 160, 980, 1174
BstMAI	GTCTC	6 cut(s)	496, 938, 1483, 1694, 1851, 2663
BstMCI	CGRYCG	1 cut(s)	1769
BstMWI	GCNNNNNNNGC	8 cut(s)	258, 878, 986, 1350, 2278, 2287, 2398, 2462
BstNI	CCWGG	3 cut(s)	211, 1983, 2507
BstPAI	GACNNNNGTC	1 cut(s)	1075
BstPI	GGTNACC	2 cut(s)	533, 1582
BstSCI	CCNGG	6 cut(s)	209, 327, 1981, 2230, 2505, 2627
BstSFI	CTRYAG	1 cut(s)	1684
BstSLI	GKGCMC	1 cut(s)	1982
BstUI	CGCG	3 cut(s)	158, 1506, 2077
BstV1I	GCAGC	4 cut(s)	2259, 2342, 2449, 2530
BstV2I	GAAGAC	1 cut(s)	330
BstX2I	RGATCY	6 cut(s)	178, 1049, 1147, 1639, 2234, 2631
BstXI	CCANNNNNNTGG	1 cut(s)	1377
BstYI	RGATCY	6 cut(s)	178, 1049, 1147, 1639, 2234, 2631
Bsu15I	ATCGAT	1 cut(s)	186
Bsu36I	CCTNAGG	1 cut(s)	994
BsuRI	GGCC	9 cut(s)	120, 513, 728, 810, 2215, 2230, 2510, 2620, 2646
BsuTUI	ATCGAT	1 cut(s)	186
BtgI	CCRYGG	1 cut(s)	1504
BtsCI	GGATG	4 cut(s)	206, 916, 1005, 1053
BtsIMutI	CAGTG	6 cut(s)	261, 1192, 2141, 2209, 2409, 2667
BtuMI	TCGCGA	1 cut(s)	2077
Cac8I	GCNNGC	5 cut(s)	158, 987, 2380, 2622, 2703
CaiI	CAGNNNCTG	1 cut(s)	1275
CfoI	GCGC	4 cut(s)	158, 160, 980, 1174
Cfr10I	RCCGGY	1 cut(s)	2620
Cfr13I	GGNCC	6 cut(s)	511, 746, 1286, 2229, 2618, 2645
Cfr42I	CCGCGG	1 cut(s)	1507
ClaI	ATCGAT	1 cut(s)	186
CseI	GACGC	1 cut(s)	2498
Csp6I	GTAC	2 cut(s)	481, 1018
CspCI	CAANNNNNGTGG	2 cut(s)	1455, 1490
CviAII	CATG	7 cut(s)	84, 249, 269, 622, 2030, 2056, 2608
CviQI	GTAC	2 cut(s)	481, 1018
DraI	TTTAAA	1 cut(s)	1971
DraIII	CACNNNGTG	1 cut(s)	1955
DrdI	GACNNNNNNGTC	1 cut(s)	2672
DseDI	GACNNNNNNGTC	1 cut(s)	2672
EaeI	YGGCCR	2 cut(s)	2213, 2508
Eam1104I	CTCTTC	6 cut(s)	85, 1034, 1588, 1697, 2077, 2101
EarI	CTCTTC	6 cut(s)	85, 1034, 1588, 1697, 2077, 2101
Ecl136II	GAGCTC	2 cut(s)	420, 2456
Eco24I	GRGCYC	2 cut(s)	422, 2458
Eco47I	GGWCC	2 cut(s)	746, 1286
Eco53kI	GAGCTC	2 cut(s)	420, 2456
Eco57I	CTGAAG	3 cut(s)	342, 497, 1152
Eco72I	CACGTG	1 cut(s)	577
Eco81I	CCTNAGG	1 cut(s)	994
Eco91I	GGTNACC	2 cut(s)	533, 1582
EcoICRI	GAGCTC	2 cut(s)	420, 2456
EcoO109I	RGGNCCY	1 cut(s)	1286
EcoO65I	GGTNACC	2 cut(s)	533, 1582
EcoRI	GAATTC	4 cut(s)	822, 1775, 1812, 1884
EcoRII	CCWGG	3 cut(s)	209, 1981, 2505
EcoT22I	ATGCAT	2 cut(s)	140, 883
EcoT38I	GRGCYC	2 cut(s)	422, 2458
FaeI	CATG	7 cut(s)	87, 252, 272, 625, 2033, 2059, 2611
FalI	AAGNNNNNCTT	4 cut(s)	677, 709, 1873, 1905
FaqI	GGGAC	5 cut(s)	732, 1083, 1175, 1821, 2035
FatI	CATG	7 cut(s)	83, 248, 268, 621, 2029, 2055, 2607
FauI	CCCGC	1 cut(s)	1524
FbaI	TGATCA	1 cut(s)	886
Fnu4HI	GCNGC	7 cut(s)	1507, 2273, 2356, 2463, 2544, 2644, 2706
FokI	GGATG	4 cut(s)	193, 923, 1012, 1040
FriOI	GRGCYC	2 cut(s)	422, 2458
Fsp4HI	GCNGC	7 cut(s)	1507, 2273, 2356, 2463, 2544, 2644, 2706
FspBI	CTAG	8 cut(s)	96, 705, 869, 950, 960, 1085, 1094, 1481
GlaI	GCGC	4 cut(s)	157, 159, 979, 1173
GluI	GCNGC	7 cut(s)	1507, 2273, 2356, 2463, 2544, 2644, 2706
GsaI	CCCAGC	1 cut(s)	1178
GsuI	CTGGAG	1 cut(s)	2556
HaeIII	GGCC	9 cut(s)	120, 513, 728, 810, 2215, 2230, 2510, 2620, 2646
HapII	CCGG	8 cut(s)	328, 2067, 2232, 2287, 2316, 2511, 2621, 2628
HgaI	GACGC	1 cut(s)	2498
HhaI	GCGC	4 cut(s)	158, 160, 980, 1174
Hin1I	GRCGYC	1 cut(s)	2490
Hin1II	CATG	7 cut(s)	87, 252, 272, 625, 2033, 2059, 2611
Hin6I	GCGC	4 cut(s)	156, 158, 978, 1172
HinP1I	GCGC	4 cut(s)	156, 158, 978, 1172
HincII	GTYRAC	1 cut(s)	769
HindII	GTYRAC	1 cut(s)	769
HindIII	AAGCTT	2 cut(s)	1250, 2045
HpaI	GTTAAC	1 cut(s)	769
HpaII	CCGG	8 cut(s)	328, 2067, 2232, 2287, 2316, 2511, 2621, 2628
HphI	GGTGA	4 cut(s)	1594, 1676, 2299, 2402
Hpy166II	GTNNAC	3 cut(s)	101, 769, 2613
Hpy8I	GTNNAC	3 cut(s)	101, 769, 2613
Hpy99I	CGWCG	4 cut(s)	2082, 2492, 2678, 2681
HpyCH4III	ACNGT	5 cut(s)	1077, 1277, 2161, 2191, 2671
HpyCH4IV	ACGT	1 cut(s)	576
HpyF10VI	GCNNNNNNNGC	8 cut(s)	258, 878, 986, 1350, 2278, 2287, 2398, 2462
HpySE526I	ACGT	1 cut(s)	576
Hsp92I	GRCGYC	1 cut(s)	2490
Hsp92II	CATG	7 cut(s)	87, 252, 272, 625, 2033, 2059, 2611
HspAI	GCGC	4 cut(s)	156, 158, 978, 1172
KroI	GCCGGC	1 cut(s)	2620
KroNI	GCCGGC	1 cut(s)	2622
Ksp22I	TGATCA	1 cut(s)	886
KspAI	GTTAAC	1 cut(s)	769
KspI	CCGCGG	1 cut(s)	1507
LguI	GCTCTTC	2 cut(s)	2077, 2101
LmnI	GCTCC	5 cut(s)	310, 1008, 1449, 2484, 2696
Lsp1109I	GCAGC	4 cut(s)	2259, 2342, 2449, 2530
LweI	GCATC	7 cut(s)	147, 178, 307, 575, 990, 1362, 2327
MaeI	CTAG	8 cut(s)	96, 705, 869, 950, 960, 1085, 1094, 1481
MaeII	ACGT	1 cut(s)	576
MaeIII	GTNAC	5 cut(s)	404, 533, 570, 1333, 1582
MbiI	CCGCTC	1 cut(s)	1878
MfeI	CAATTG	2 cut(s)	1454, 2110
MflI	RGATCY	6 cut(s)	178, 1049, 1147, 1639, 2234, 2631
MhlI	GDGCHC	4 cut(s)	422, 1982, 2384, 2458
MlsI	TGGCCA	1 cut(s)	2215
MluNI	TGGCCA	1 cut(s)	2215
MlyI	GAGTC	4 cut(s)	1609, 2328, 2581, 2665
MmeI	TCCRAC	3 cut(s)	315, 921, 2547
Mox20I	TGGCCA	1 cut(s)	2215
Mph1103I	ATGCAT	2 cut(s)	140, 883
MroNI	GCCGGC	1 cut(s)	2620
MroXI	GAANNNNTTC	1 cut(s)	600
MscI	TGGCCA	1 cut(s)	2215
MslI	CAYNNNNRTG	3 cut(s)	1044, 1731, 2034
Msp20I	TGGCCA	1 cut(s)	2215
MspA1I	CMGCKG	3 cut(s)	744, 1506, 2643
MspI	CCGG	8 cut(s)	328, 2067, 2232, 2287, 2316, 2511, 2621, 2628
MspR9I	CCNGG	6 cut(s)	211, 329, 1983, 2232, 2507, 2629
MunI	CAATTG	2 cut(s)	1454, 2110
MvaI	CCWGG	3 cut(s)	211, 1983, 2507
MvnI	CGCG	3 cut(s)	158, 1506, 2077
MwoI	GCNNNNNNNGC	8 cut(s)	258, 878, 986, 1350, 2278, 2287, 2398, 2462
NaeI	GCCGGC	1 cut(s)	2622
NciI	CCSGG	3 cut(s)	329, 2232, 2629
NgoMIV	GCCGGC	1 cut(s)	2620
NlaIII	CATG	7 cut(s)	87, 252, 272, 625, 2033, 2059, 2611
NlaIV	GGNNCC	3 cut(s)	748, 1051, 1239
NmuCI	GTSAC	2 cut(s)	1333, 1582
NruI	TCGCGA	1 cut(s)	2077
NsiI	ATGCAT	2 cut(s)	140, 883
PauI	GCGCGC	1 cut(s)	156
PciSI	GCTCTTC	2 cut(s)	2077, 2101
PcsI	WCGNNNNNNNCGW	2 cut(s)	2319, 2670
PdiI	GCCGGC	1 cut(s)	2622
PdmI	GAANNNNTTC	1 cut(s)	600
PfeI	GAWTC	8 cut(s)	350, 517, 1361, 1723, 1919, 2146, 2350, 2587
PflFI	GACNNNGTC	2 cut(s)	2492, 2669
PflMI	CCANNNNNTGG	1 cut(s)	1411
PkrI	GCNGC	7 cut(s)	1508, 2274, 2357, 2464, 2545, 2645, 2707
PleI	GAGTC	4 cut(s)	1609, 2327, 2580, 2664
PmaCI	CACGTG	1 cut(s)	577
PmlI	CACGTG	1 cut(s)	577
PpsI	GAGTC	4 cut(s)	1609, 2327, 2580, 2664
Ppu21I	YACGTR	1 cut(s)	577
PpuMI	RGGWCCY	1 cut(s)	1286
PshAI	GACNNNNGTC	1 cut(s)	1075
PsiI	TTATAA	1 cut(s)	1230
Psp124BI	GAGCTC	2 cut(s)	422, 2458
Psp5II	RGGWCCY	1 cut(s)	1286
Psp6I	CCWGG	3 cut(s)	209, 1981, 2505
PspCI	CACGTG	1 cut(s)	577
PspEI	GGTNACC	2 cut(s)	533, 1582
PspFI	CCCAGC	1 cut(s)	1174
PspGI	CCWGG	3 cut(s)	209, 1981, 2505
PspN4I	GGNNCC	3 cut(s)	748, 1051, 1239
PspPI	GGNCC	6 cut(s)	511, 746, 1286, 2229, 2618, 2645
PspPPI	RGGWCCY	1 cut(s)	1286
PstI	CTGCAG	1 cut(s)	1688
PstNI	CAGNNNCTG	1 cut(s)	1275
PsuI	RGATCY	6 cut(s)	178, 1049, 1147, 1639, 2234, 2631
PsyI	GACNNNGTC	2 cut(s)	2492, 2669
PteI	GCGCGC	1 cut(s)	156
RruI	TCGCGA	1 cut(s)	2077
RsaI	GTAC	2 cut(s)	482, 1019
RsaNI	GTAC	2 cut(s)	481, 1018
RseI	CAYNNNNRTG	3 cut(s)	1044, 1731, 2034
SacI	GAGCTC	2 cut(s)	422, 2458
SacII	CCGCGG	1 cut(s)	1507
SapI	GCTCTTC	2 cut(s)	2077, 2101
SatI	GCNGC	7 cut(s)	1507, 2273, 2356, 2463, 2544, 2644, 2706
Sau96I	GGNCC	6 cut(s)	511, 746, 1286, 2229, 2618, 2645
SchI	GAGTC	4 cut(s)	1609, 2328, 2581, 2665
ScrFI	CCNGG	6 cut(s)	211, 329, 1983, 2232, 2507, 2629
SduI	GDGCHC	4 cut(s)	422, 1982, 2384, 2458
SfaNI	GCATC	7 cut(s)	147, 178, 307, 575, 990, 1362, 2327
SfcI	CTRYAG	1 cut(s)	1684
Sfr303I	CCGCGG	1 cut(s)	1507
SgrBI	CCGCGG	1 cut(s)	1507
SinI	GGWCC	2 cut(s)	746, 1286
SmiMI	CAYNNNNRTG	3 cut(s)	1044, 1731, 2034
SmlI	CTYRAG	1 cut(s)	415
SmoI	CTYRAG	1 cut(s)	415
SpeI	ACTAGT	1 cut(s)	95
SspI	AATATT	3 cut(s)	46, 1741, 1930
SspMI	CTAG	8 cut(s)	96, 705, 869, 950, 960, 1085, 1094, 1481
SstI	GAGCTC	2 cut(s)	422, 2458
StyD4I	CCNGG	6 cut(s)	209, 327, 1981, 2230, 2505, 2627
TaaI	ACNGT	5 cut(s)	1077, 1277, 2161, 2191, 2671
TaiI	ACGT	1 cut(s)	579
TaqII	GACCGA	1 cut(s)	2669
TauI	GCSGC	3 cut(s)	1509, 2646, 2708
TfiI	GAWTC	8 cut(s)	350, 517, 1361, 1723, 1919, 2146, 2350, 2587
TscAI	CASTG	6 cut(s)	268, 1192, 2148, 2216, 2409, 2674
TseFI	GTSAC	2 cut(s)	1333, 1582
TseI	GCWGC	4 cut(s)	2272, 2355, 2462, 2543
Tsp45I	GTSAC	2 cut(s)	1333, 1582
TspGWI	ACGGA	2 cut(s)	2241, 2531
TspRI	CASTG	6 cut(s)	268, 1192, 2148, 2216, 2409, 2674
Tth111I	GACNNNGTC	2 cut(s)	2492, 2669
Van91I	CCANNNNNTGG	1 cut(s)	1411
VpaK11BI	GGWCC	2 cut(s)	746, 1286
XbaI	TCTAGA	2 cut(s)	1093, 1480
XcmI	CCANNNNNNNNNTGG	1 cut(s)	684
XmnI	GAANNNNTTC	1 cut(s)	600
XspI	CTAG	8 cut(s)	96, 705, 869, 950, 960, 1085, 1094, 1481
Zsp2I	ATGCAT	2 cut(s)	140, 883

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.